Cow genome map


           Conread name:
           Ss1.1-rova003_g18.5
        

               Conread position:
               20-253
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               113-262
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 147
               

               Conread position:
               114-253
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               127-258
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 18
               

               Conread position:
               128-249
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 32
               

               Conread position:
               128-253
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               54, 35
               

               Conread position:
               128-254
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               129-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               132-246
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               54, 19
               

               Conread position:
               132-249
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               133-247
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 7
               

               Conread position:
               133-248
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               41, 18
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 17
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               24, 88
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 99
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               133-256
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               133-258
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               133-258
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               20, 124
               

               Conread position:
               133-258
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               133-261
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 13
               

               Conread position:
               134-248
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               15, 27
               

               Conread position:
               134-249
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               134-249
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               134-249
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-250
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               15, 27
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 26
               

               Conread position:
               134-258
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               134-258
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               134-258
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               134-258
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               134-258
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               44, 19
               

               Conread position:
               134-265
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               135-249
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 113
               

               Conread position:
               135-252
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               135-254
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               135-262
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               44, 11
               

               Conread position:
               136-254
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 104
               

               Conread position:
               136-256
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               137-253
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               137-258
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               138-253
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               138-253
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               138-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               139-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               139-326
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 133
               

               Conread position:
               140-253
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               142-253
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               142-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               35, 55
               

               Conread position:
               143-253
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               143-253
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               143-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               146-253
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               146-253
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               31, 69
               

               Conread position:
               148-254
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               73, 55
               

               Conread position:
               149-249
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               149-252
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 80
               
Show alignments to all cow chromosomes.