Cow genome map
| Conread name: | Ss1.1-rova003_g18.5 |
| Conread position: | 85-248 |
| Cow position: | chr14:19624085-19624266 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 133-244 |
| Cow position: | chr14:33341815-33341934 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 133-247 |
| Cow position: | chr14:21933282-21933162 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 133-249 |
| Cow position: | chr14:4991063-4991179 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 83 |
| Conread position: | 133-249 |
| Cow position: | chr14:24236886-24237006 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 133-249 |
| Cow position: | chr14:37883855-37883734 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 133-253 |
| Cow position: | chr14:5835967-5836086 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 21, 37 |
| Conread position: | 133-253 |
| Cow position: | chr14:24991883-24992008 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 133-253 |
| Cow position: | chr14:27312484-27312611 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 133-253 |
| Cow position: | chr14:28115126-28115001 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 133-253 |
| Cow position: | chr14:36289740-36289615 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 133-253 |
| Cow position: | chr14:38379083-38379206 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 133-254 |
| Cow position: | chr14:23712749-23712873 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 133-259 |
| Cow position: | chr14:24580989-24581116 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 134-249 |
| Cow position: | chr14:16760461-16760577 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 134-252 |
| Cow position: | chr14:15492656-15492780 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 134-252 |
| Cow position: | chr14:20640568-20640443 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 134-252 |
| Cow position: | chr14:24608026-24608150 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 134-253 |
| Cow position: | chr14:18345670-18345549 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 134-253 |
| Cow position: | chr14:37131715-37131840 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 134-258 |
| Cow position: | chr14:38747725-38747855 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 135-249 |
| Cow position: | chr14:33714616-33714502 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 135-253 |
| Cow position: | chr14:20110659-20110538 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 135-253 |
| Cow position: | chr14:35018690-35018570 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 135-258 |
| Cow position: | chr14:40432984-40433111 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 136-253 |
| Cow position: | chr14:4109410-4109291 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 136-253 |
| Cow position: | chr14:16256830-16256951 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 136-253 |
| Cow position: | chr14:39778816-39778935 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 137-252 |
| Cow position: | chr14:38673566-38673447 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 137-253 |
| Cow position: | chr14:19129570-19129696 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 137-253 |
| Cow position: | chr14:41210917-41211038 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 138-248 |
| Cow position: | chr14:11748846-11748736 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 139-249 |
| Cow position: | chr14:42596446-42596561 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 139-253 |
| Cow position: | chr14:22583212-22583326 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 139-253 |
| Cow position: | chr14:33828225-33828346 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 139-262 |
| Cow position: | chr14:41966307-41966431 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 115 |
| Conread position: | 140-253 |
| Cow position: | chr14:10912900-10912787 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 141-253 |
| Cow position: | chr14:41127961-41128078 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 144-268 |
| Cow position: | chr14:24981524-24981656 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 115 |
| Conread position: | 146-253 |
| Cow position: | chr14:14466399-14466293 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 146-253 |
| Cow position: | chr14:47672815-47672700 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 146-262 |
| Cow position: | chr14:33830367-33830488 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 112 |
| Conread position: | 147-249 |
| Cow position: | chr14:44084405-44084298 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 94 |
| Conread position: | 147-256 |
| Cow position: | chr14:33643710-33643594 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 147-258 |
| Cow position: | chr14:445492-445601 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 77, 34 |
| Conread position: | 151-253 |
| Cow position: | chr14:25779174-25779276 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 151-258 |
| Cow position: | chr14:16033085-16033198 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 152-265 |
| Cow position: | chr14:12614016-12613896 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.