Cow genome map


           Conread name:
           Ss1.1-rova003_g18.5
        

               Conread position:
               33-249
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               128-261
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               23, 57
               

               Conread position:
               129-249
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               129-253
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               133-248
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               133-252
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               9, 95
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               46, 19
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               133-254
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               91, 20
               

               Conread position:
               133-255
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               133-256
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               91, 13
               

               Conread position:
               133-258
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               133-258
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 133
               

               Conread position:
               133-262
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               133-262
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               46, 13
               

               Conread position:
               134-248
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               134-249
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               134-252
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               51, 26
               

               Conread position:
               135-249
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               42, 86
               

               Conread position:
               136-249
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               137-248
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               137-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               139-243
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               139-247
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               139-248
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               139-248
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               139-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               139-253
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               139-316
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               40, 109
               

               Conread position:
               140-253
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               140-259
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               141-253
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               141-253
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               141-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               141-254
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               142-253
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-249
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               144-264
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               145-258
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 110
               

               Conread position:
               146-253
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               147-253
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               147-253
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               148-253
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               148-253
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 9
               

               Conread position:
               148-269
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 81
               

               Conread position:
               150-253
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               152-253
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 71
               

               Conread position:
               154-254
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               70, 32
               

               Conread position:
               155-253
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               171-258
               

               Cow position:
               
               

               Alignm length:
               89
               

               Alignm identity:
               78
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               7, 83
               
Show alignments to all cow chromosomes.