Cow genome map


           Conread name:
           Ss1.1-rova003_g18.5
        

               Conread position:
               21-240
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               124-239
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               126-262
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               128-253
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               128-258
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               129-253
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               132-255
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               133-252
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               133-252
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 19
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               133-262
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               44, 121
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               49, 26
               

               Conread position:
               134-254
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               49, 26
               

               Conread position:
               134-262
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 123
               

               Conread position:
               134-313
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 128
               

               Conread position:
               135-249
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               135-252
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               135-258
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               135-265
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 26
               

               Conread position:
               136-249
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               136-249
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               136-252
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               136-260
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               137-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               42, 23
               

               Conread position:
               138-250
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               45, 13
               

               Conread position:
               139-253
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 90
               

               Conread position:
               139-253
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               139-253
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               139-268
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               141-249
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               141-253
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               142-253
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               142-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               142-253
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               142-258
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               143-253
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               147-253
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               149-253
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               152-253
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               153-249
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 0
               
Show alignments to all cow chromosomes.