Cow genome map

Conread name: Ss1.1-rova003_g18.5

Conread position: 33-252
Cow position: chr27:28931921-28931693 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 7

Conread position: 128-253
Cow position: chr27:26413284-26413154 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 23

Conread position: 130-247
Cow position: chr27:22035407-22035284 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 133-249
Cow position: chr27:27270566-27270444 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 133-249
Cow position: chr27:27550766-27550649 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 13

Conread position: 133-253
Cow position: chr27:3871-3983 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 133-253
Cow position: chr27:13875703-13875830 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 133-253
Cow position: chr27:18593244-18593366 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 18

Conread position: 133-253
Cow position: chr27:22268476-22268600 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 13

Conread position: 133-253
Cow position: chr27:22418795-22418669 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 110
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 113

Conread position: 133-253
Cow position: chr27:25379965-25380092 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 133-253
Cow position: chr27:27020131-27020003 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 133-258
Cow position: chr27:2592518-2592653 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 133-258
Cow position: chr27:16237884-16238009 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 133-258
Cow position: chr27:23890913-23891045 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 12

Conread position: 133-262
Cow position: chr27:25277115-25277246 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 24

Conread position: 134-247
Cow position: chr27:23594297-23594409 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 134-248
Cow position: chr27:26643660-26643772 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 134-249
Cow position: chr27:20553700-20553815 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 134-249
Cow position: chr27:20758069-20757957 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 134-253
Cow position: chr27:1498291-1498416 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 134-253
Cow position: chr27:4672992-4673118 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 134-253
Cow position: chr27:17397478-17397351 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 134-253
Cow position: chr27:20789403-20789278 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 134-253
Cow position: chr27:22386844-22386969 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 135-249
Cow position: chr27:16871939-16871818 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 135-250
Cow position: chr27:20092853-20092742 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 135-258
Cow position: chr27:27003298-27003170 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 18

Conread position: 136-258
Cow position: chr27:19685734-19685606 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 24

Conread position: 137-249
Cow position: chr27:6550436-6550552 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 13

Conread position: 137-252
Cow position: chr27:26426186-26426303 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 14

Conread position: 137-257
Cow position: chr27:21669143-21669019 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 25

Conread position: 138-253
Cow position: chr27:23472235-23472351 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 22

Conread position: 138-258
Cow position: chr27:4858661-4858542 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 20, 47

Conread position: 139-252
Cow position: chr27:2957383-2957499 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 38

Conread position: 139-253
Cow position: chr27:15643150-15643271 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 141-253
Cow position: chr27:4011658-4011778 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 141-253
Cow position: chr27:12429385-12429502 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 142-262
Cow position: chr27:28190232-28190112 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 111

Conread position: 143-258
Cow position: chr27:28518277-28518394 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 146-249
Cow position: chr27:22569762-22569867 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 148-252
Cow position: chr27:20481387-20481279 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 15

Conread position: 149-254
Cow position: chr27:20354573-20354684 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 151-249
Cow position: chr27:18434479-18434380 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 0

Show alignments to all cow chromosomes.