Cow genome map

Conread name: Ss1.1-rova003_g18.5

Conread position: 80-253
Cow position: chr29:9685964-9686146 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 123-249
Cow position: chr29:18462561-18462695 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 130-249
Cow position: chr29:26654054-26654177 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 133-248
Cow position: chr29:30188358-30188479 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 18

Conread position: 133-249
Cow position: chr29:10235151-10235269 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 84

Conread position: 133-249
Cow position: chr29:24624229-24624111 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 105

Conread position: 133-252
Cow position: chr29:22778196-22778321 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 13

Conread position: 133-253
Cow position: chr29:17128-17248 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 52

Conread position: 133-253
Cow position: chr29:2984870-2984740 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 133-253
Cow position: chr29:3396087-3395962 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 13

Conread position: 133-253
Cow position: chr29:4052006-4052128 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 133-253
Cow position: chr29:12025488-12025615 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 133-253
Cow position: chr29:17668470-17668355 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 133-253
Cow position: chr29:28868618-28868492 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 133-253
Cow position: chr29:35292071-35291946 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 133-253
Cow position: chr29:37618284-37618162 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 134-248
Cow position: chr29:40166222-40166107 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 134-253
Cow position: chr29:19762249-19762132 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 134-253
Cow position: chr29:44008801-44008926 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 23

Conread position: 134-262
Cow position: chr29:29769373-29769501 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 22

Conread position: 135-249
Cow position: chr29:45005650-45005763 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 109

Conread position: 135-253
Cow position: chr29:23243900-23244024 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 26

Conread position: 135-253
Cow position: chr29:28396663-28396544 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 26

Conread position: 135-253
Cow position: chr29:29314675-29314799 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 135-253
Cow position: chr29:32211079-32211200 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 25

Conread position: 135-258
Cow position: chr29:26986908-26986781 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 135-258
Cow position: chr29:27826500-27826375 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 22

Conread position: 136-241
Cow position: chr29:25333484-25333593 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 94

Conread position: 136-248
Cow position: chr29:27329869-27329753 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 15

Conread position: 136-249
Cow position: chr29:31674609-31674490 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 104
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 138-253
Cow position: chr29:25092088-25091968 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 138-258
Cow position: chr29:22162275-22162404 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 139-249
Cow position: chr29:32963533-32963418 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 88

Conread position: 139-249
Cow position: chr29:39567663-39567547 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 139-250
Cow position: chr29:29558454-29558569 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 139-252
Cow position: chr29:4520311-4520192 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 105
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 139-253
Cow position: chr29:25432376-25432259 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 139-260
Cow position: chr29:39643151-39643027 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 112

Conread position: 140-265
Cow position: chr29:2533036-2532909 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 141-253
Cow position: chr29:4334701-4334583 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 142-253
Cow position: chr29:24252211-24252094 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 144-253
Cow position: chr29:4066057-4065942 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 146-253
Cow position: chr29:6925980-6925868 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 146-254
Cow position: chr29:11647058-11646951 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 146-265
Cow position: chr29:12783986-12784115 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 147-243
Cow position: chr29:10296247-10296345 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 50

Conread position: 149-248
Cow position: chr29:28979520-28979622 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 151-249
Cow position: chr29:28166251-28166353 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Show alignments to all cow chromosomes.