Cow genome map


           Conread name:
           Ss1.1-rova003_g18.5
        

               Conread position:
               78-253
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               13, 6
               

               Conread position:
               122-253
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               57, 45
               

               Conread position:
               124-253
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               127-244
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               129-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               132-243
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               133-241
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               133-247
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 54
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               133-252
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               133-252
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               133-252
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               21, 38
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               42, 13
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               45, 16
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 19
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 99
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               23, 84
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               133-255
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               133-256
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               46, 13
               

               Conread position:
               133-258
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               46, 13
               

               Conread position:
               133-258
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               133-258
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 98
               

               Conread position:
               133-260
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               91, 13
               

               Conread position:
               133-262
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               8, 128
               

               Conread position:
               133-262
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               133-264
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 27
               

               Conread position:
               133-266
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               133-269
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               134-248
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               134-249
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               134-249
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               134-252
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 87
               

               Conread position:
               134-258
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               134-262
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               52, 31
               

               Conread position:
               134-265
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               135-249
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               135-252
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 34
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               135-257
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               135-258
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               135-259
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               136-249
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               136-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               136-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               136-253
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 21
               

               Conread position:
               137-246
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               137-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               137-253
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               137-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               137-256
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               137-258
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               114, 35
               

               Conread position:
               139-253
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               139-258
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               34, 88
               

               Conread position:
               140-253
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               140-254
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               141-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               142-253
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               142-258
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               143-261
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               146-246
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               146-246
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               146-253
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               146-262
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 105
               

               Conread position:
               147-249
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               148-250
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               148-253
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               148-253
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               148-253
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               31, 53
               

               Conread position:
               149-253
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               149-253
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               149-258
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               151-253
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               151-253
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               151-253
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               153-253
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 75
               

               Conread position:
               153-254
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               30, 0
               
Show alignments to all cow chromosomes.