Cow genome map

Conread name: Ss1.1-rova003_g18.5

Conread position: 33-253
Cow position: chr4:5460792-5461012 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 7

Conread position: 62-253
Cow position: chr4:43909786-43909593 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 9

Conread position: 92-255
Cow position: chr4:40410113-40410273 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 98, 60

Conread position: 128-253
Cow position: chr4:54191069-54190938 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 129-249
Cow position: chr4:20027125-20027247 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 132-253
Cow position: chr4:17474414-17474286 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 18

Conread position: 133-240
Cow position: chr4:49993047-49992941 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 52

Conread position: 133-242
Cow position: chr4:39231547-39231655 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 84

Conread position: 133-249
Cow position: chr4:6653699-6653583 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 13

Conread position: 133-249
Cow position: chr4:19408023-19408146 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 133-249
Cow position: chr4:49089765-49089642 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 21, 107

Conread position: 133-249
Cow position: chr4:64072380-64072495 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 47

Conread position: 133-250
Cow position: chr4:52166877-52167000 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 133-252
Cow position: chr4:36893333-36893208 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 33

Conread position: 133-252
Cow position: chr4:51784154-51784029 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 133-252
Cow position: chr4:54524365-54524479 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 34

Conread position: 133-253
Cow position: chr4:4321027-4321152 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 13

Conread position: 133-253
Cow position: chr4:5999216-5999339 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 94

Conread position: 133-253
Cow position: chr4:11099693-11099819 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 109
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 133-253
Cow position: chr4:11901587-11901713 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 48, 18

Conread position: 133-253
Cow position: chr4:16736475-16736354 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 90, 11

Conread position: 133-253
Cow position: chr4:17111899-17112027 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 25

Conread position: 133-253
Cow position: chr4:22236504-22236631 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 133-253
Cow position: chr4:22345047-22345168 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 133-253
Cow position: chr4:25888857-25888980 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 13

Conread position: 133-253
Cow position: chr4:27276568-27276696 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 133-253
Cow position: chr4:30574424-30574301 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 18

Conread position: 133-253
Cow position: chr4:44782349-44782223 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 133-253
Cow position: chr4:66547794-66547917 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 59, 18

Conread position: 133-255
Cow position: chr4:37313144-37313018 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 18

Conread position: 133-258
Cow position: chr4:1237140-1237271 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 13

Conread position: 133-258
Cow position: chr4:47348803-47348670 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 133-258
Cow position: chr4:48137886-48137756 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 13

Conread position: 133-261
Cow position: chr4:36577657-36577788 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 13

Conread position: 133-268
Cow position: chr4:59377883-59377750 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 17

Conread position: 134-249
Cow position: chr4:21232895-21233020 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 134-249
Cow position: chr4:27530091-27529971 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 134-253
Cow position: chr4:45896-45771 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 104

Conread position: 134-253
Cow position: chr4:16602078-16602203 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 134-253
Cow position: chr4:21531670-21531794 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 134-253
Cow position: chr4:24458130-24458249 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 134-253
Cow position: chr4:27540589-27540471 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 134-253
Cow position: chr4:33612385-33612509 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 49, 26

Conread position: 134-253
Cow position: chr4:38935332-38935206 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 134-253
Cow position: chr4:41907828-41907942 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 19, 35

Conread position: 134-253
Cow position: chr4:42423832-42423948 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 134-253
Cow position: chr4:51898982-51898857 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 134-253
Cow position: chr4:56233655-56233537 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 53

Conread position: 134-253
Cow position: chr4:66112098-66112223 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 134-258
Cow position: chr4:13832635-13832758 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 134-258
Cow position: chr4:19097261-19097134 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 67, 29

Conread position: 134-262
Cow position: chr4:34641753-34641882 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 107

Conread position: 134-262
Cow position: chr4:44449531-44449666 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 27

Conread position: 135-249
Cow position: chr4:52087900-52087789 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 135-249
Cow position: chr4:52748483-52748604 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 104
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 135-253
Cow position: chr4:12049219-12049095 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 135-253
Cow position: chr4:19463468-19463345 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 25

Conread position: 135-253
Cow position: chr4:21391839-21391963 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 135-253
Cow position: chr4:23509568-23509442 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 136-253
Cow position: chr4:10379081-10378958 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 136-253
Cow position: chr4:10915870-10915987 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 136-253
Cow position: chr4:19744859-19744735 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 136-253
Cow position: chr4:34022614-34022737 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 136-259
Cow position: chr4:39009938-39009809 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 35

Conread position: 137-253
Cow position: chr4:3689674-3689558 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 28

Conread position: 137-253
Cow position: chr4:13344508-13344396 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 24

Conread position: 137-253
Cow position: chr4:19322108-19322233 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 137-253
Cow position: chr4:22744292-22744175 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 137-253
Cow position: chr4:34224086-34223969 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 137-253
Cow position: chr4:41867414-41867294 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 137-253
Cow position: chr4:49424798-49424682 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 137-253
Cow position: chr4:53209208-53209087 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 44, 23

Conread position: 138-253
Cow position: chr4:11871939-11872058 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 138-253
Cow position: chr4:33395731-33395844 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 139-241
Cow position: chr4:26011822-26011714 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 139-248
Cow position: chr4:52497625-52497733 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 81, 46

Conread position: 139-249
Cow position: chr4:45662539-45662654 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 98

Conread position: 139-253
Cow position: chr4:20147155-20147036 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 40, 98

Conread position: 139-256
Cow position: chr4:5047368-5047492 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 139-258
Cow position: chr4:22741447-22741569 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 71

Conread position: 139-258
Cow position: chr4:23847078-23847204 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 139-258
Cow position: chr4:30690687-30690565 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 139-266
Cow position: chr4:10016631-10016756 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 112

Conread position: 140-253
Cow position: chr4:34630864-34630744 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 83

Conread position: 141-252
Cow position: chr4:16881395-16881512 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 141-253
Cow position: chr4:480036-480155 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 141-253
Cow position: chr4:11671424-11671305 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 85

Conread position: 141-253
Cow position: chr4:33869626-33869511 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 101
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 141-253
Cow position: chr4:36290596-36290478 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 142-253
Cow position: chr4:4084483-4084598 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 143-262
Cow position: chr4:19142251-19142136 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 17

Conread position: 144-252
Cow position: chr4:27755334-27755450 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 145-253
Cow position: chr4:56513981-56514085 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 146-253
Cow position: chr4:1354657-1354768 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 146-253
Cow position: chr4:11090736-11090843 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 50

Conread position: 146-253
Cow position: chr4:19501126-19501234 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 147-252
Cow position: chr4:69386050-69385944 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 36, 57

Conread position: 147-253
Cow position: chr4:36725000-36724888 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 147-259
Cow position: chr4:49158828-49158940 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 108

Conread position: 148-249
Cow position: chr4:508947-509049 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 148-249
Cow position: chr4:23854152-23854050 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 148-253
Cow position: chr4:48321982-48321874 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 148-258
Cow position: chr4:27632411-27632296 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 112

Conread position: 150-253
Cow position: chr4:43369893-43370004 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 158-249
Cow position: chr4:45574955-45574859 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 24, 0

Show alignments to all cow chromosomes.