Cow genome map


           Conread name:
           Ss1.1-rova003_g18.5
        

               Conread position:
               16-253
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               32-249
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               123-253
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 23
               

               Conread position:
               124-249
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               127-252
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               132-249
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               47, 113
               

               Conread position:
               133-246
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               133-247
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 7
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               133-252
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               133-252
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               133-252
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               133-252
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               50, 18
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               31, 84
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 69
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               91, 13
               

               Conread position:
               133-253
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               133-258
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               133-258
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               50, 18
               

               Conread position:
               133-258
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               133-262
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               133-262
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               133-269
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 92
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               17, 29
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               47, 26
               

               Conread position:
               134-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               134-258
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 70
               

               Conread position:
               134-258
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               134-262
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               67, 121
               

               Conread position:
               135-246
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               135-249
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               135-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               135-254
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               135-258
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               135-258
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 104
               

               Conread position:
               135-261
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               135-265
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               136-249
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               136-249
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               136-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 73
               

               Conread position:
               136-253
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               136-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               136-253
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               136-253
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               136-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               136-253
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               136-258
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 116
               

               Conread position:
               137-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 112
               

               Conread position:
               137-253
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               137-258
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               137-258
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 80
               

               Conread position:
               137-258
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               73, 58
               

               Conread position:
               137-262
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               13, 116
               

               Conread position:
               139-253
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               139-253
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               140-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 103
               

               Conread position:
               141-253
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               142-242
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               142-243
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               142-246
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               144-252
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               146-252
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               146-253
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               146-258
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               147-253
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               147-253
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               148-253
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               38, 82
               

               Conread position:
               149-249
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               151-253
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               151-253
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               26, 60
               
Show alignments to all cow chromosomes.