Cow genome map

Conread name: Ss1.1-rova003_g18.5

Conread position: 33-253
Cow position: chr8:20926544-20926773 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 7

Conread position: 33-253
Cow position: chr8:43167941-43168157 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 8

Conread position: 35-261
Cow position: chr8:43228058-43227831 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 6

Conread position: 80-253
Cow position: chr8:17669693-17669871 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 62

Conread position: 124-253
Cow position: chr8:22756020-22755886 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 78

Conread position: 129-253
Cow position: chr8:28987695-28987574 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 32

Conread position: 131-253
Cow position: chr8:25455402-25455276 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 15

Conread position: 133-241
Cow position: chr8:55719334-55719449 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 133-244
Cow position: chr8:10699471-10699584 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 99
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 91, 24

Conread position: 133-246
Cow position: chr8:18831729-18831608 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 133-248
Cow position: chr8:18207144-18207261 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 24

Conread position: 133-248
Cow position: chr8:19975821-19975943 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 133-248
Cow position: chr8:35210935-35211050 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 102
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 13

Conread position: 133-249
Cow position: chr8:4500484-4500363 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 17

Conread position: 133-249
Cow position: chr8:6232904-6233026 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 133-249
Cow position: chr8:32295736-32295860 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 133-249
Cow position: chr8:36465198-36465078 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 16

Conread position: 133-249
Cow position: chr8:44882940-44882817 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 133-250
Cow position: chr8:53964754-53964876 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 133-253
Cow position: chr8:3655582-3655464 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 91, 38

Conread position: 133-253
Cow position: chr8:5484877-5485009 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 133-253
Cow position: chr8:10263173-10263295 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 20

Conread position: 133-253
Cow position: chr8:20837116-20836992 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 13

Conread position: 133-253
Cow position: chr8:23179549-23179676 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 109
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 133-253
Cow position: chr8:23585959-23586088 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 133-253
Cow position: chr8:37148114-37147987 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 13

Conread position: 133-253
Cow position: chr8:37334164-37334040 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 42, 13

Conread position: 133-253
Cow position: chr8:43439604-43439478 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 133-253
Cow position: chr8:47664912-47665037 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 133-255
Cow position: chr8:20683964-20683834 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 133-258
Cow position: chr8:24867750-24867881 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 133-258
Cow position: chr8:28412621-28412757 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 133-259
Cow position: chr8:21826757-21826892 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 134-246
Cow position: chr8:39174252-39174371 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 134-249
Cow position: chr8:10456458-10456337 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 134-249
Cow position: chr8:34478111-34477991 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 50, 12

Conread position: 134-249
Cow position: chr8:42116611-42116727 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 38

Conread position: 134-253
Cow position: chr8:8986954-8987075 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 134-253
Cow position: chr8:19717108-19717227 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 134-253
Cow position: chr8:23018519-23018639 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 134-253
Cow position: chr8:24980691-24980567 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 134-253
Cow position: chr8:31297261-31297135 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 134-253
Cow position: chr8:32620998-32621124 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 134-253
Cow position: chr8:33406856-33406976 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 134-253
Cow position: chr8:35991042-35990918 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 76

Conread position: 134-253
Cow position: chr8:37391368-37391489 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 64

Conread position: 134-253
Cow position: chr8:38681872-38681750 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 134-253
Cow position: chr8:39630766-39630642 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 134-253
Cow position: chr8:45287295-45287415 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 134-253
Cow position: chr8:46616404-46616281 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 26

Conread position: 134-258
Cow position: chr8:32133260-32133135 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 135-245
Cow position: chr8:5867067-5866952 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 135-249
Cow position: chr8:2814614-2814494 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 25

Conread position: 135-249
Cow position: chr8:3704614-3704491 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 135-252
Cow position: chr8:33432243-33432125 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 28

Conread position: 135-253
Cow position: chr8:11927136-11927019 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 33

Conread position: 135-253
Cow position: chr8:39555973-39555849 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 67

Conread position: 135-253
Cow position: chr8:39807583-39807462 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 135-253
Cow position: chr8:57045507-57045627 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 16

Conread position: 135-254
Cow position: chr8:53558615-53558741 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 109
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 136-253
Cow position: chr8:24201896-24201774 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 52, 24

Conread position: 136-253
Cow position: chr8:35504247-35504368 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 136-253
Cow position: chr8:55897825-55897937 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 137-252
Cow position: chr8:56581222-56581336 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 137-253
Cow position: chr8:5450620-5450741 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 137-253
Cow position: chr8:10176157-10176273 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 14

Conread position: 137-254
Cow position: chr8:50266275-50266163 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 137-280
Cow position: chr8:45447111-45447261 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 137-295
Cow position: chr8:638048-637884 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 138-253
Cow position: chr8:36375527-36375641 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 138-262
Cow position: chr8:28185668-28185792 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 60

Conread position: 139-249
Cow position: chr8:43191040-43191154 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 139-253
Cow position: chr8:20102788-20102904 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 139-253
Cow position: chr8:32093866-32093746 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 140-253
Cow position: chr8:1023952-1023832 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 140-280
Cow position: chr8:51480843-51480991 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 141-253
Cow position: chr8:46235688-46235571 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 142-262
Cow position: chr8:60455173-60455057 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 143-253
Cow position: chr8:29026648-29026768 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 143-253
Cow position: chr8:42607294-42607410 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 143-262
Cow position: chr8:935692-935569 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 110

Conread position: 146-253
Cow position: chr8:16061061-16060956 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 146-253
Cow position: chr8:44437747-44437633 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 147-264
Cow position: chr8:1834902-1834781 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 108

Conread position: 148-249
Cow position: chr8:42145799-42145902 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 81

Conread position: 148-249
Cow position: chr8:56824038-56824141 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 148-253
Cow position: chr8:51579246-51579139 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 149-249
Cow position: chr8:25388120-25388014 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 150-248
Cow position: chr8:56507311-56507414 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 83

Conread position: 150-253
Cow position: chr8:11606305-11606202 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.