Cow genome map
| Conread name: | Ss1.1-rpan11_f21.5 | 
| Conread position: | 1-209 | 
| Cow position: | chr3:33881520-33881312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 206-356 | 
| Cow position: | chr3:33880960-33880810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 355-554 | 
| Cow position: | chr3:33876200-33876001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 553-785 | 
| Cow position: | chr3:33875622-33875390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 769-918 | 
| Cow position: | chr3:33874622-33874474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 918-1040 | 
| Cow position: | chr3:33873659-33873537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1038-1141 | 
| Cow position: | chr3:33873445-33873342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 104 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1141-1260 | 
| Cow position: | chr3:33871125-33871006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1258-1392 | 
| Cow position: | chr3:33870566-33870432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1391-1611 | 
| Cow position: | chr3:33868686-33868461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 190, 0 | 
Show alignments to all cow chromosomes.
