Cow genome map
| Conread name: | Ss1.1-rpfco0102_k14.5 |
| Conread position: | 2-340 |
| Cow position: | chr10:8996352-8996002 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 52 |
| Conread position: | 8-417 |
| Cow position: | chr10:9031243-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 58, 66 |
| Conread position: | 11-404 |
| Cow position: | chr10:9010241-9009834 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 61 |
| Conread position: | 12-626 |
| Cow position: | chr10:9010490-9009865 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 12-693 |
| Cow position: | chr10:8996594-8995911 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 534 |
| Conread position: | 12-703 |
| Cow position: | chr10:21939316-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 96 |
| Conread position: | 12-705 |
| Cow position: | chr10:9010574-9009870 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 11 |
| Conread position: | 12-764 |
| Cow position: | chr10:8996762-8995999 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 464 |
| Conread position: | 13-751 |
| Cow position: | chr10:8996845-8996096 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 547 |
| Conread position: | 22-532 |
| Cow position: | chr10:9031098-9031611 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 42-761 |
| Cow position: | chr10:8996900-8996170 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 513 |
| Conread position: | 80-761 |
| Cow position: | chr10:9010590-9009898 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 157 |
| Conread position: | 132-751 |
| Cow position: | chr10:8996882-8996264 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 402, 0 |
| Conread position: | 242-705 |
| Cow position: | chr10:9010582-9010122 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 248-670 |
| Cow position: | chr10:9031243-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 332-785 |
| Cow position: | chr10:8996934-8996478 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 418, 211 |
| Conread position: | 336-711 |
| Cow position: | chr10:21939162-21938788 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 124, 128 |
| Conread position: | 350-703 |
| Cow position: | chr10:9031261-9031613 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 112 |
| Conread position: | 360-761 |
| Cow position: | chr10:21939222-21938822 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 415-751 |
| Cow position: | chr10:9031242-9031577 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 416-807 |
| Cow position: | chr10:8996934-8996537 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 21, 17 |
| Conread position: | 489-757 |
| Cow position: | chr10:9031232-9031501 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 68, 48 |
Show alignments to all cow chromosomes.