Cow genome map
Conread name: | Ss1.1-rpfco0102_k14.5 |
Conread position: | 1-699 |
Cow position: | chr14:25794855-25794147 (view UCSC Genome Browser custom track) |
Alignm length: | 715 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 70 |
Conread position: | 2-704 |
Cow position: | chr14:25783672-25784385 (view UCSC Genome Browser custom track) |
Alignm length: | 721 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 68 |
Conread position: | 2-723 |
Cow position: | chr14:680299-681031 (view UCSC Genome Browser custom track) |
Alignm length: | 736 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 329 |
Conread position: | 2-771 |
Cow position: | chr14:25794938-25794155 (view UCSC Genome Browser custom track) |
Alignm length: | 787 |
Alignm identity: | 465 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 129, 221 |
Conread position: | 2-790 |
Cow position: | chr14:25783756-25784560 (view UCSC Genome Browser custom track) |
Alignm length: | 813 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 74 |
Conread position: | 3-626 |
Cow position: | chr14:25836544-25837178 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 68 |
Conread position: | 3-704 |
Cow position: | chr14:25895443-25896155 (view UCSC Genome Browser custom track) |
Alignm length: | 721 |
Alignm identity: | 430 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 63, 73 |
Conread position: | 8-535 |
Cow position: | chr14:3127856-3127317 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 332 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 118, 232 |
Conread position: | 8-705 |
Cow position: | chr14:25876989-25877697 (view UCSC Genome Browser custom track) |
Alignm length: | 713 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 56 |
Conread position: | 8-755 |
Cow position: | chr14:680557-681316 (view UCSC Genome Browser custom track) |
Alignm length: | 764 |
Alignm identity: | 468 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 414 |
Conread position: | 8-761 |
Cow position: | chr14:25895028-25895792 (view UCSC Genome Browser custom track) |
Alignm length: | 769 |
Alignm identity: | 438 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 61, 66 |
Conread position: | 9-711 |
Cow position: | chr14:25895113-25895826 (view UCSC Genome Browser custom track) |
Alignm length: | 721 |
Alignm identity: | 426 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 45, 67 |
Conread position: | 11-452 |
Cow position: | chr14:25910832-25911285 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 297 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 43, 63 |
Conread position: | 11-723 |
Cow position: | chr14:3080425-3079702 (view UCSC Genome Browser custom track) |
Alignm length: | 726 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 227 |
Conread position: | 11-751 |
Cow position: | chr14:3080509-3079758 (view UCSC Genome Browser custom track) |
Alignm length: | 756 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 243 |
Conread position: | 11-751 |
Cow position: | chr14:25836048-25836799 (view UCSC Genome Browser custom track) |
Alignm length: | 756 |
Alignm identity: | 467 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 307 |
Conread position: | 11-752 |
Cow position: | chr14:3101167-3100420 (view UCSC Genome Browser custom track) |
Alignm length: | 759 |
Alignm identity: | 455 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 115, 104 |
Conread position: | 11-809 |
Cow position: | chr14:3080845-3080029 (view UCSC Genome Browser custom track) |
Alignm length: | 821 |
Alignm identity: | 483 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 53, 65 |
Conread position: | 12-505 |
Cow position: | chr14:25836721-25837226 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 318 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 52, 64 |
Conread position: | 12-590 |
Cow position: | chr14:25836637-25837226 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 360 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 118, 229 |
Conread position: | 12-621 |
Cow position: | chr14:25784270-25784884 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 388 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 118, 226 |
Conread position: | 12-704 |
Cow position: | chr14:25783346-25784049 (view UCSC Genome Browser custom track) |
Alignm length: | 708 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 226 |
Conread position: | 12-704 |
Cow position: | chr14:25859774-25860477 (view UCSC Genome Browser custom track) |
Alignm length: | 707 |
Alignm identity: | 424 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 122, 234 |
Conread position: | 12-704 |
Cow position: | chr14:25876825-25877528 (view UCSC Genome Browser custom track) |
Alignm length: | 707 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 64 |
Conread position: | 12-705 |
Cow position: | chr14:25836469-25837173 (view UCSC Genome Browser custom track) |
Alignm length: | 708 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 236 |
Conread position: | 12-705 |
Cow position: | chr14:25859942-25860646 (view UCSC Genome Browser custom track) |
Alignm length: | 711 |
Alignm identity: | 427 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 45, 64 |
Conread position: | 12-706 |
Cow position: | chr14:25783514-25784219 (view UCSC Genome Browser custom track) |
Alignm length: | 713 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 58 |
Conread position: | 12-707 |
Cow position: | chr14:25860110-25860811 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 421 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 52, 61 |
Conread position: | 12-738 |
Cow position: | chr14:3101082-3100350 (view UCSC Genome Browser custom track) |
Alignm length: | 743 |
Alignm identity: | 446 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 114, 22 |
Conread position: | 12-742 |
Cow position: | chr14:25877161-25877900 (view UCSC Genome Browser custom track) |
Alignm length: | 748 |
Alignm identity: | 449 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 52, 61 |
Conread position: | 12-749 |
Cow position: | chr14:25877077-25877825 (view UCSC Genome Browser custom track) |
Alignm length: | 760 |
Alignm identity: | 464 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 54, 61 |
Conread position: | 12-750 |
Cow position: | chr14:3128020-3127271 (view UCSC Genome Browser custom track) |
Alignm length: | 756 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 236 |
Conread position: | 12-751 |
Cow position: | chr14:25836385-25837135 (view UCSC Genome Browser custom track) |
Alignm length: | 757 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 64 |
Conread position: | 12-761 |
Cow position: | chr14:3080676-3079916 (view UCSC Genome Browser custom track) |
Alignm length: | 763 |
Alignm identity: | 460 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 225 |
Conread position: | 12-761 |
Cow position: | chr14:3155900-3156651 (view UCSC Genome Browser custom track) |
Alignm length: | 763 |
Alignm identity: | 447 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 42, 64 |
Conread position: | 12-761 |
Cow position: | chr14:25836301-25837061 (view UCSC Genome Browser custom track) |
Alignm length: | 764 |
Alignm identity: | 456 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 543 |
Conread position: | 12-761 |
Cow position: | chr14:25859354-25860114 (view UCSC Genome Browser custom track) |
Alignm length: | 770 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 61 |
Conread position: | 12-761 |
Cow position: | chr14:25859522-25860282 (view UCSC Genome Browser custom track) |
Alignm length: | 768 |
Alignm identity: | 466 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 63 |
Conread position: | 12-761 |
Cow position: | chr14:25876909-25877669 (view UCSC Genome Browser custom track) |
Alignm length: | 766 |
Alignm identity: | 460 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 63 |
Conread position: | 12-785 |
Cow position: | chr14:25860026-25860809 (view UCSC Genome Browser custom track) |
Alignm length: | 795 |
Alignm identity: | 475 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 80, 85 |
Conread position: | 12-818 |
Cow position: | chr14:25795432-25794613 (view UCSC Genome Browser custom track) |
Alignm length: | 825 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 559 |
Conread position: | 13-626 |
Cow position: | chr14:3101333-3100714 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 383 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 111, 274 |
Conread position: | 13-704 |
Cow position: | chr14:25783935-25784637 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 450 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 294 |
Conread position: | 13-761 |
Cow position: | chr14:25859187-25859946 (view UCSC Genome Browser custom track) |
Alignm length: | 769 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 227 |
Conread position: | 14-705 |
Cow position: | chr14:25795262-25794560 (view UCSC Genome Browser custom track) |
Alignm length: | 707 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 313 |
Conread position: | 14-706 |
Cow position: | chr14:25795178-25794475 (view UCSC Genome Browser custom track) |
Alignm length: | 710 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 303 |
Conread position: | 14-749 |
Cow position: | chr14:25795094-25794348 (view UCSC Genome Browser custom track) |
Alignm length: | 751 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 47 |
Conread position: | 18-790 |
Cow position: | chr14:25795342-25794554 (view UCSC Genome Browser custom track) |
Alignm length: | 793 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 41 |
Conread position: | 32-761 |
Cow position: | chr14:25876425-25877165 (view UCSC Genome Browser custom track) |
Alignm length: | 750 |
Alignm identity: | 463 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 41 |
Conread position: | 36-617 |
Cow position: | chr14:447531-448123 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 367 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 90, 201 |
Conread position: | 76-761 |
Cow position: | chr14:25859167-25859862 (view UCSC Genome Browser custom track) |
Alignm length: | 704 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 9 |
Conread position: | 81-620 |
Cow position: | chr14:25910738-25911284 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 349 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 45, 156 |
Conread position: | 132-761 |
Cow position: | chr14:25836097-25836725 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 97 |
Conread position: | 133-626 |
Cow position: | chr14:3100786-3100285 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 310 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 91, 78 |
Conread position: | 137-722 |
Cow position: | chr14:3080959-3080375 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 116 |
Conread position: | 147-701 |
Cow position: | chr14:3101438-3100889 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 79 |
Conread position: | 153-761 |
Cow position: | chr14:25835782-25836389 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 377 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 67, 76 |
Conread position: | 164-751 |
Cow position: | chr14:25876233-25876819 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 341 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 82, 74 |
Conread position: | 165-595 |
Cow position: | chr14:3155408-3155837 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 271 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 43, 58 |
Conread position: | 165-661 |
Cow position: | chr14:3155981-3156476 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 61 |
Conread position: | 165-689 |
Cow position: | chr14:447588-448111 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 315 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 226, 235 |
Conread position: | 165-711 |
Cow position: | chr14:25910750-25911291 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 344 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 56, 40 |
Conread position: | 165-743 |
Cow position: | chr14:3128023-3127446 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 382, 0 |
Conread position: | 165-751 |
Cow position: | chr14:25895701-25896286 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 335 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 45, 63 |
Conread position: | 167-704 |
Cow position: | chr14:25795433-25794897 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 334 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 136, 119 |
Conread position: | 167-761 |
Cow position: | chr14:3128105-3127512 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 380, 0 |
Conread position: | 168-723 |
Cow position: | chr14:3155900-3156454 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 58 |
Conread position: | 177-790 |
Cow position: | chr14:3128179-3127562 (view UCSC Genome Browser custom track) |
Alignm length: | 623 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 55 |
Conread position: | 241-761 |
Cow position: | chr14:25859175-25859694 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 298, 0 |
Conread position: | 245-704 |
Cow position: | chr14:25895025-25895483 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 280 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 72, 65 |
Conread position: | 249-679 |
Cow position: | chr14:3155408-3155837 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 264 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 230, 235 |
Conread position: | 314-798 |
Cow position: | chr14:25783324-25783810 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 312 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 152, 145 |
Conread position: | 321-761 |
Cow position: | chr14:447576-448015 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 275 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 216, 0 |
Conread position: | 331-737 |
Cow position: | chr14:25894943-25895348 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 246 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 146, 153 |
Conread position: | 334-761 |
Cow position: | chr14:447505-447931 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 260 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 213, 0 |
Conread position: | 335-751 |
Cow position: | chr14:680392-680807 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 253 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 245, 212 |
Conread position: | 336-702 |
Cow position: | chr14:447675-448040 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 242 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 211, 0 |
Conread position: | 336-751 |
Cow position: | chr14:680309-680723 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 251 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 312, 198 |
Conread position: | 336-785 |
Cow position: | chr14:3155900-3156352 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 281 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 385, 217 |
Conread position: | 351-723 |
Cow position: | chr14:3080913-3080542 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 236 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 32, 28 |
Conread position: | 357-679 |
Cow position: | chr14:420584-420903 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 202 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 359-751 |
Cow position: | chr14:25895559-25895950 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 239 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 164, 170 |
Conread position: | 386-704 |
Cow position: | chr14:25783312-25783629 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 206 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 153, 173 |
Conread position: | 417-757 |
Cow position: | chr14:3155408-3155747 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 220 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 301, 130 |
Conread position: | 483-762 |
Cow position: | chr14:3101438-3101161 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 183 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 67, 76 |
Conread position: | 489-750 |
Cow position: | chr14:420630-420890 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 169 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 150, 48 |
Conread position: | 501-760 |
Cow position: | chr14:3155408-3155666 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 168 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 222, 52 |
Show alignments to all cow chromosomes.