Cow genome map


           Conread name:
           Ss1.1-rpfco0102_k14.5
        

               Conread position:
               1-789
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 550
               

               Conread position:
               2-425
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               123, 223
               

               Conread position:
               2-699
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 320
               

               Conread position:
               2-749
               

               Cow position:
               
               

               Alignm length:
               763
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 67
               

               Conread position:
               2-761
               

               Cow position:
               
               

               Alignm length:
               775
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 40
               

               Conread position:
               3-760
               

               Cow position:
               
               

               Alignm length:
               772
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 234
               

               Conread position:
               3-768
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 469
               

               Conread position:
               8-704
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 13
               

               Conread position:
               11-363
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               119, 305
               

               Conread position:
               11-706
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 464
               

               Conread position:
               11-751
               

               Cow position:
               
               

               Alignm length:
               758
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               12-537
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               337
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               81, 85
               

               Conread position:
               12-543
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               12-751
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 295
               

               Conread position:
               12-756
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 303
               

               Conread position:
               12-808
               

               Cow position:
               
               

               Alignm length:
               819
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 58
               

               Conread position:
               12-808
               

               Cow position:
               
               

               Alignm length:
               816
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 544
               

               Conread position:
               12-809
               

               Cow position:
               
               

               Alignm length:
               818
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               13-688
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 243
               

               Conread position:
               22-700
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               67-757
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 171
               

               Conread position:
               132-705
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 92
               

               Conread position:
               132-757
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 29
               

               Conread position:
               132-804
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               580, 412
               

               Conread position:
               138-705
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 84
               

               Conread position:
               148-790
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               335, 331
               

               Conread position:
               168-790
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 68
               

               Conread position:
               178-784
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 48
               

               Conread position:
               249-790
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 48
               

               Conread position:
               312-757
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               438, 227
               

               Conread position:
               389-751
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               528-761
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               568-809
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               67, 56
               
Show alignments to all cow chromosomes.