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Cow genome map

           
Conread name:
           
Ss1.1-rpfco0102_k14.5
        

               
Conread position:
               
1-697
               

               
Cow position:
               
chr18:41198071-41198780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 550
               

               
Conread position:
               
1-705
               

               
Cow position:
               
chr18:42960469-42959760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 124
               

               
Conread position:
               
1-757
               

               
Cow position:
               
chr18:41197987-41198756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 235
               

               
Conread position:
               
1-807
               

               
Cow position:
               
chr18:41197567-41198391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 487
               

               
Conread position:
               
1-808
               

               
Cow position:
               
chr18:43093834-43093028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 152
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr18:43048651-43048358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr18:14453211-14452917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
122, 238
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr18:42744220-42743795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
2-497
               

               
Cow position:
               
chr18:42744304-42743797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
2-523
               

               
Cow position:
               
chr18:1418079-1418612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 156
               

               
Conread position:
               
2-628
               

               
Cow position:
               
chr18:40086269-40085642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
2-648
               

               
Cow position:
               
chr18:51874056-51874706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
2-653
               

               
Cow position:
               
chr18:49032717-49032055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 161
               

               
Conread position:
               
2-677
               

               
Cow position:
               
chr18:50083611-50084300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
2-689
               

               
Cow position:
               
chr18:50058958-50058269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
2-700
               

               
Cow position:
               
chr18:50099640-50100347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
2-702
               

               
Cow position:
               
chr18:41949103-41948392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 556
               

               
Conread position:
               
2-704
               

               
Cow position:
               
chr18:40086353-40085649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 77
               

               
Conread position:
               
2-704
               

               
Cow position:
               
chr18:41949019-41948307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 472
               

               
Conread position:
               
2-704
               

               
Cow position:
               
chr18:43023078-43022365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
2-704
               

               
Cow position:
               
chr18:44240002-44240715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
2-704
               

               
Cow position:
               
chr18:51367937-51367225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
2-710
               

               
Cow position:
               
chr18:51969334-51970042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
124, 242
               

               
Conread position:
               
2-712
               

               
Cow position:
               
chr18:50099052-50099773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 95
               

               
Conread position:
               
2-717
               

               
Cow position:
               
chr18:50083527-50084253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
2-749
               

               
Cow position:
               
chr18:41949187-41948429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 553
               

               
Conread position:
               
2-749
               

               
Cow position:
               
chr18:42744556-42743798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 74
               

               
Conread position:
               
2-749
               

               
Cow position:
               
chr18:42744640-42743882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 325
               

               
Conread position:
               
2-749
               

               
Cow position:
               
chr18:43022826-43022068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 236
               

               
Conread position:
               
2-749
               

               
Cow position:
               
chr18:43093593-43092835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
762
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
2-749
               

               
Cow position:
               
chr18:50099556-50100314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 242
               

               
Conread position:
               
2-751
               

               
Cow position:
               
chr18:40306330-40307090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 70
               

               
Conread position:
               
2-751
               

               
Cow position:
               
chr18:42792049-42792809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 307
               

               
Conread position:
               
2-751
               

               
Cow position:
               
chr18:42792133-42792893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
762
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 555
               

               
Conread position:
               
2-761
               

               
Cow position:
               
chr18:42791881-42792651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
2-761
               

               
Cow position:
               
chr18:44154206-44153455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 225
               

               
Conread position:
               
2-761
               

               
Cow position:
               
chr18:52428130-52428900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
2-761
               

               
Cow position:
               
chr18:52446933-52447703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 427
               

               
Conread position:
               
2-785
               

               
Cow position:
               
chr18:40324807-40324009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
804
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 315
               

               
Conread position:
               
2-785
               

               
Cow position:
               
chr18:42960222-42959433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
805
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
2-785
               

               
Cow position:
               
chr18:53636051-53635253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 161
               

               
Conread position:
               
2-787
               

               
Cow position:
               
chr18:51368357-51367558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
804
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 555
               

               
Conread position:
               
2-793
               

               
Cow position:
               
chr18:42790957-42791764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
810
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 473
               

               
Conread position:
               
2-809
               

               
Cow position:
               
chr18:52447353-52448178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 319
               

               
Conread position:
               
3-542
               

               
Cow position:
               
chr18:42985062-42984511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 375
               

               
Conread position:
               
3-555
               

               
Cow position:
               
chr18:50021986-50021420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
122, 152
               

               
Conread position:
               
3-770
               

               
Cow position:
               
chr18:50059125-50058347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 234
               

               
Conread position:
               
3-772
               

               
Cow position:
               
chr18:42693718-42692936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
3-787
               

               
Cow position:
               
chr18:52447186-52447985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
804
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 174
               

               
Conread position:
               
3-790
               

               
Cow position:
               
chr18:51812974-51812171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
806
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 561
               

               
Conread position:
               
3-834
               

               
Cow position:
               
chr18:50848665-50849516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 405
               

               
Conread position:
               
6-751
               

               
Cow position:
               
chr18:51368605-51367849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
6-807
               

               
Cow position:
               
chr18:42791634-42792447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
7-542
               

               
Cow position:
               
chr18:51969508-51970043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 6
               

               
Conread position:
               
7-692
               

               
Cow position:
               
chr18:51400531-51401226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 6
               

               
Conread position:
               
7-760
               

               
Cow position:
               
chr18:50083448-50084214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
7-761
               

               
Cow position:
               
chr18:40306504-40307268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
7-761
               

               
Cow position:
               
chr18:50848499-50849266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 551
               

               
Conread position:
               
7-785
               

               
Cow position:
               
chr18:44239756-44240548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 6
               

               
Conread position:
               
7-789
               

               
Cow position:
               
chr18:42675322-42674526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
8-514
               

               
Cow position:
               
chr18:50251001-50251516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
8-529
               

               
Cow position:
               
chr18:42693461-42692928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 175
               

               
Conread position:
               
8-542
               

               
Cow position:
               
chr18:50246328-50246871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
118, 313
               

               
Conread position:
               
8-627
               

               
Cow position:
               
chr18:53509405-53510034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 230
               

               
Conread position:
               
8-637
               

               
Cow position:
               
chr18:54967869-54968508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
8-704
               

               
Cow position:
               
chr18:53586748-53586041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 232
               

               
Conread position:
               
8-705
               

               
Cow position:
               
chr18:33064351-33063643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 320
               

               
Conread position:
               
8-705
               

               
Cow position:
               
chr18:50099141-50099850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
8-743
               

               
Cow position:
               
chr18:56128036-56128782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 46
               

               
Conread position:
               
8-751
               

               
Cow position:
               
chr18:49033047-49032293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 155
               

               
Conread position:
               
8-751
               

               
Cow position:
               
chr18:53636129-53635375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
8-766
               

               
Cow position:
               
chr18:43167791-43168560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 538
               

               
Conread position:
               
8-789
               

               
Cow position:
               
chr18:44398440-44397644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
9-598
               

               
Cow position:
               
chr18:50295354-50295952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 524
               

               
Conread position:
               
9-602
               

               
Cow position:
               
chr18:14453432-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
9-678
               

               
Cow position:
               
chr18:40075024-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
123, 6
               

               
Conread position:
               
9-704
               

               
Cow position:
               
chr18:43120239-43119533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
9-704
               

               
Cow position:
               
chr18:51969108-51969793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
9-784
               

               
Cow position:
               
chr18:54979561-54980350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
796
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 6
               

               
Conread position:
               
9-785
               

               
Cow position:
               
chr18:42744717-42743926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
794
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 482
               

               
Conread position:
               
9-787
               

               
Cow position:
               
chr18:42837936-42837143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
795
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 549
               

               
Conread position:
               
9-809
               

               
Cow position:
               
chr18:43167708-43168526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 466
               

               
Conread position:
               
10-704
               

               
Cow position:
               
chr18:56493843-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
10-767
               

               
Cow position:
               
chr18:50022320-50021540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 307
               

               
Conread position:
               
10-807
               

               
Cow position:
               
chr18:50848168-50848983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 315
               

               
Conread position:
               
11-514
               

               
Cow position:
               
chr18:33064096-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
11-537
               

               
Cow position:
               
chr18:33064180-33063642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 305
               

               
Conread position:
               
11-681
               

               
Cow position:
               
chr18:56316387-56317068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
11-689
               

               
Cow position:
               
chr18:53586661-53585972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
11-701
               

               
Cow position:
               
chr18:56316135-56316836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 152
               

               
Conread position:
               
11-705
               

               
Cow position:
               
chr18:51766080-51765375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
119, 287
               

               
Conread position:
               
11-705
               

               
Cow position:
               
chr18:53560094-53560797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 467
               

               
Conread position:
               
11-705
               

               
Cow position:
               
chr18:53635622-53634918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 75
               

               
Conread position:
               
11-706
               

               
Cow position:
               
chr18:53610381-53609676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 297
               

               
Conread position:
               
11-707
               

               
Cow position:
               
chr18:52428307-52429013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
11-707
               

               
Cow position:
               
chr18:52433488-52434194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
11-711
               

               
Cow position:
               
chr18:33064936-33064225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 227
               

               
Conread position:
               
11-730
               

               
Cow position:
               
chr18:56329765-56329035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 540
               

               
Conread position:
               
11-749
               

               
Cow position:
               
chr18:52433152-52433901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
11-749
               

               
Cow position:
               
chr18:56128375-56129124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 243
               

               
Conread position:
               
11-757
               

               
Cow position:
               
chr18:55523560-55524319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
11-784
               

               
Cow position:
               
chr18:33064852-33064064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
795
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 287
               

               
Conread position:
               
11-784
               

               
Cow position:
               
chr18:52427803-52428591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
794
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
11-785
               

               
Cow position:
               
chr18:56329681-56328892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 540
               

               
Conread position:
               
11-808
               

               
Cow position:
               
chr18:49022314-49023127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
82, 88
               

               
Conread position:
               
12-405
               

               
Cow position:
               
chr18:43048725-43048320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
12-429
               

               
Cow position:
               
chr18:44397932-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
12-497
               

               
Cow position:
               
chr18:42984969-42984472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
112, 288
               

               
Conread position:
               
12-497
               

               
Cow position:
               
chr18:43022480-43021983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
12-521
               

               
Cow position:
               
chr18:55066855-55066334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
114, 244
               

               
Conread position:
               
12-527
               

               
Cow position:
               
chr18:43175017-43174490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
12-540
               

               
Cow position:
               
chr18:41198250-41198788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 514
               

               
Conread position:
               
12-543
               

               
Cow position:
               
chr18:22634643-22635186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
12-594
               

               
Cow position:
               
chr18:50083873-50084466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
12-627
               

               
Cow position:
               
chr18:40324545-40323920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 314
               

               
Conread position:
               
12-627
               

               
Cow position:
               
chr18:51367843-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
12-640
               

               
Cow position:
               
chr18:51400619-51401257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 135
               

               
Conread position:
               
12-644
               

               
Cow position:
               
chr18:42960044-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
12-647
               

               
Cow position:
               
chr18:43022648-43022002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
12-648
               

               
Cow position:
               
chr18:44240180-44240827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
12-665
               

               
Cow position:
               
chr18:40306676-40307340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 335
               

               
Conread position:
               
12-666
               

               
Cow position:
               
chr18:42837765-42837100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 544
               

               
Conread position:
               
12-671
               

               
Cow position:
               
chr18:56329512-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
12-675
               

               
Cow position:
               
chr18:44398184-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
12-686
               

               
Cow position:
               
chr18:42792227-42792912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 224
               

               
Conread position:
               
12-688
               

               
Cow position:
               
chr18:54993411-54994096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
12-688
               

               
Cow position:
               
chr18:56247726-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 224
               

               
Conread position:
               
12-689
               

               
Cow position:
               
chr18:53560013-53560701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
12-690
               

               
Cow position:
               
chr18:43175185-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 553
               

               
Conread position:
               
12-692
               

               
Cow position:
               
chr18:49032623-49031935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
122, 224
               

               
Conread position:
               
12-696
               

               
Cow position:
               
chr18:52447783-52448475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 309
               

               
Conread position:
               
12-699
               

               
Cow position:
               
chr18:43120152-43119454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 309
               

               
Conread position:
               
12-699
               

               
Cow position:
               
chr18:51752164-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
12-700
               

               
Cow position:
               
chr18:43167879-43168577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 544
               

               
Conread position:
               
12-701
               

               
Cow position:
               
chr18:50030979-50030282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
12-701
               

               
Cow position:
               
chr18:51789470-51788770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 242
               

               
Conread position:
               
12-703
               

               
Cow position:
               
chr18:51789302-51788602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 232
               

               
Conread position:
               
12-704
               

               
Cow position:
               
chr18:42985221-42984518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 210
               

               
Conread position:
               
12-704
               

               
Cow position:
               
chr18:42985473-42984770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 216
               

               
Conread position:
               
12-704
               

               
Cow position:
               
chr18:43022732-43022029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 314
               

               
Conread position:
               
12-704
               

               
Cow position:
               
chr18:43022984-43022281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 393
               

               
Conread position:
               
12-704
               

               
Cow position:
               
chr18:44154280-44153595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
12-704
               

               
Cow position:
               
chr18:52012439-52011737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
12-704
               

               
Cow position:
               
chr18:52447699-52448403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 304
               

               
Conread position:
               
12-704
               

               
Cow position:
               
chr18:53635705-53635003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 297
               

               
Conread position:
               
12-704
               

               
Cow position:
               
chr18:56128460-56129162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 303
               

               
Conread position:
               
12-705
               

               
Cow position:
               
chr18:40324629-40323926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
12-705
               

               
Cow position:
               
chr18:42985305-42984601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 288
               

               
Conread position:
               
12-705
               

               
Cow position:
               
chr18:44253636-44252946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 259
               

               
Conread position:
               
12-705
               

               
Cow position:
               
chr18:53586912-53586208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 324
               

               
Conread position:
               
12-710
               

               
Cow position:
               
chr18:44239928-44240637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 63
               

               
Conread position:
               
12-712
               

               
Cow position:
               
chr18:50059284-50058573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 316
               

               
Conread position:
               
12-720
               

               
Cow position:
               
chr18:50271464-50272181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 301
               

               
Conread position:
               
12-723
               

               
Cow position:
               
chr18:49032791-49032069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 151
               

               
Conread position:
               
12-723
               

               
Cow position:
               
chr18:56330184-56329462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 147
               

               
Conread position:
               
12-727
               

               
Cow position:
               
chr18:50049052-50048326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
12-733
               

               
Cow position:
               
chr18:51812629-51811897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 242
               

               
Conread position:
               
12-748
               

               
Cow position:
               
chr18:42675066-42674319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
12-749
               

               
Cow position:
               
chr18:44398268-44397520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 297
               

               
Conread position:
               
12-749
               

               
Cow position:
               
chr18:51368095-51367348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 226
               

               
Conread position:
               
12-749
               

               
Cow position:
               
chr18:51789554-51788806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 236
               

               
Conread position:
               
12-749
               

               
Cow position:
               
chr18:56329596-56328848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 537
               

               
Conread position:
               
12-751
               

               
Cow position:
               
chr18:33064515-33063765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
12-751
               

               
Cow position:
               
chr18:43175437-43174687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
12-751
               

               
Cow position:
               
chr18:44154451-44153705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 319
               

               
Conread position:
               
12-751
               

               
Cow position:
               
chr18:49022483-49023231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
12-751
               

               
Cow position:
               
chr18:49032959-49032209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 393
               

               
Conread position:
               
12-751
               

               
Cow position:
               
chr18:49033295-49032545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 534
               

               
Conread position:
               
12-751
               

               
Cow position:
               
chr18:51765659-51764909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 238
               

               
Conread position:
               
12-751
               

               
Cow position:
               
chr18:52012272-52011519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
762
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
118, 134
               

               
Conread position:
               
12-751
               

               
Cow position:
               
chr18:54967542-54968287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 64
               

               
Conread position:
               
12-751
               

               
Cow position:
               
chr18:54967791-54968539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
12-751
               

               
Cow position:
               
chr18:55018135-55018884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 218
               

               
Conread position:
               
12-751
               

               
Cow position:
               
chr18:56316052-56316802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
12-751
               

               
Cow position:
               
chr18:56330016-56329266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 209
               

               
Conread position:
               
12-756
               

               
Cow position:
               
chr18:42675150-42674395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 367
               

               
Conread position:
               
12-756
               

               
Cow position:
               
chr18:53509241-53509996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
12-757
               

               
Cow position:
               
chr18:43094074-43093329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 73
               

               
Conread position:
               
12-757
               

               
Cow position:
               
chr18:50059620-50058862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 228
               

               
Conread position:
               
12-761
               

               
Cow position:
               
chr18:33064599-33063839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 400
               

               
Conread position:
               
12-761
               

               
Cow position:
               
chr18:40324713-40323953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 296
               

               
Conread position:
               
12-761
               

               
Cow position:
               
chr18:41197746-41198506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 309
               

               
Conread position:
               
12-761
               

               
Cow position:
               
chr18:49032875-49032115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 463
               

               
Conread position:
               
12-761
               

               
Cow position:
               
chr18:50022148-50021382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
12-761
               

               
Cow position:
               
chr18:50059452-50058692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
12-761
               

               
Cow position:
               
chr18:50083369-50084129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 560
               

               
Conread position:
               
12-761
               

               
Cow position:
               
chr18:50098978-50099738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 216
               

               
Conread position:
               
12-761
               

               
Cow position:
               
chr18:50099314-50100074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 216
               

               
Conread position:
               
12-761
               

               
Cow position:
               
chr18:51368263-51367504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
12-761
               

               
Cow position:
               
chr18:51812713-51811953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 242
               

               
Conread position:
               
12-761
               

               
Cow position:
               
chr18:55523479-55524239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
12-765
               

               
Cow position:
               
chr18:44184715-44183949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 459
               

               
Conread position:
               
12-771
               

               
Cow position:
               
chr18:40086766-40085995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
12-784
               

               
Cow position:
               
chr18:41949345-41948558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 546
               

               
Conread position:
               
12-784
               

               
Cow position:
               
chr18:52432901-52433688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 316
               

               
Conread position:
               
12-784
               

               
Cow position:
               
chr18:53559845-53560632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
796
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
12-784
               

               
Cow position:
               
chr18:54979815-54980601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
796
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 64
               

               
Conread position:
               
12-785
               

               
Cow position:
               
chr18:42985557-42984769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
796
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 285
               

               
Conread position:
               
12-785
               

               
Cow position:
               
chr18:53635789-53635002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
790
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 242
               

               
Conread position:
               
12-787
               

               
Cow position:
               
chr18:42791135-42791925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
795
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
12-787
               

               
Cow position:
               
chr18:44184799-44184009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
797
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 240
               

               
Conread position:
               
12-789
               

               
Cow position:
               
chr18:42985389-42984597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
797
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 293
               

               
Conread position:
               
12-789
               

               
Cow position:
               
chr18:44253720-44252942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
798
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 218
               

               
Conread position:
               
12-789
               

               
Cow position:
               
chr18:53525695-53526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
12-790
               

               
Cow position:
               
chr18:51789722-51788928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 240
               

               
Conread position:
               
12-793
               

               
Cow position:
               
chr18:42791303-42792100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
803
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 229
               

               
Conread position:
               
12-802
               

               
Cow position:
               
chr18:54993075-54993879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
811
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
12-803
               

               
Cow position:
               
chr18:42791975-42792784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
812
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 310
               

               
Conread position:
               
12-805
               

               
Cow position:
               
chr18:51812881-51812070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
12-807
               

               
Cow position:
               
chr18:42791723-42792536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
817
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 539
               

               
Conread position:
               
12-809
               

               
Cow position:
               
chr18:42791219-42792034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 308
               

               
Conread position:
               
12-812
               

               
Cow position:
               
chr18:40324881-40324063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
823
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 243
               

               
Conread position:
               
12-850
               

               
Cow position:
               
chr18:50245996-50246853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 49
               

               
Conread position:
               
13-626
               

               
Cow position:
               
chr18:49022650-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
115, 319
               

               
Conread position:
               
13-677
               

               
Cow position:
               
chr18:50281678-50282353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
13-690
               

               
Cow position:
               
chr18:14454016-14453325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
13-705
               

               
Cow position:
               
chr18:44254051-44253353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 221
               

               
Conread position:
               
13-711
               

               
Cow position:
               
chr18:43093498-43092790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 538
               

               
Conread position:
               
13-749
               

               
Cow position:
               
chr18:43175268-43174521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 225
               

               
Conread position:
               
13-749
               

               
Cow position:
               
chr18:55067106-55066359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 225
               

               
Conread position:
               
13-751
               

               
Cow position:
               
chr18:40086426-40085686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 221
               

               
Conread position:
               
13-751
               

               
Cow position:
               
chr18:43120319-43119570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 281
               

               
Conread position:
               
13-757
               

               
Cow position:
               
chr18:40306593-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 123
               

               
Conread position:
               
13-760
               

               
Cow position:
               
chr18:50049135-50048377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
13-760
               

               
Cow position:
               
chr18:50848423-50849181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
13-818
               

               
Cow position:
               
chr18:43120403-43119585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 315
               

               
Conread position:
               
14-627
               

               
Cow position:
               
chr18:33093101-33092477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
14-677
               

               
Cow position:
               
chr18:50031061-50030389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 219
               

               
Conread position:
               
14-704
               

               
Cow position:
               
chr18:40306258-40306959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
14-761
               

               
Cow position:
               
chr18:51839388-51838611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 741
               

               
Conread position:
               
14-809
               

               
Cow position:
               
chr18:42791557-42792370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 83
               

               
Conread position:
               
15-723
               

               
Cow position:
               
chr18:50048965-50048252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
15-761
               

               
Cow position:
               
chr18:51765740-51764983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
762
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 61
               

               
Conread position:
               
15-785
               

               
Cow position:
               
chr18:40306175-40306960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
790
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
15-785
               

               
Cow position:
               
chr18:43175677-43174901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 297
               

               
Conread position:
               
15-809
               

               
Cow position:
               
chr18:43093664-43092852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
814
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 536
               

               
Conread position:
               
15-809
               

               
Cow position:
               
chr18:50083288-50084100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
821
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
17-718
               

               
Cow position:
               
chr18:53559934-53560646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 310
               

               
Conread position:
               
17-721
               

               
Cow position:
               
chr18:56433724-56434432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
17-789
               

               
Cow position:
               
chr18:56434137-56434924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
796
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
18-705
               

               
Cow position:
               
chr18:56247806-56247116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
18-789
               

               
Cow position:
               
chr18:50848344-50849130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 80
               

               
Conread position:
               
21-760
               

               
Cow position:
               
chr18:53586987-53586237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
22-711
               

               
Cow position:
               
chr18:50295201-50295900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 214
               

               
Conread position:
               
22-784
               

               
Cow position:
               
chr18:53587070-53586293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
108, 306
               

               
Conread position:
               
23-704
               

               
Cow position:
               
chr18:44253957-44253282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
25-704
               

               
Cow position:
               
chr18:51839545-51838855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 521
               

               
Conread position:
               
25-784
               

               
Cow position:
               
chr18:52427733-52428507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 296
               

               
Conread position:
               
25-797
               

               
Cow position:
               
chr18:43175592-43174804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
794
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 213
               

               
Conread position:
               
26-714
               

               
Cow position:
               
chr18:51752234-51751534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 534
               

               
Conread position:
               
27-682
               

               
Cow position:
               
chr18:1417936-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 232
               

               
Conread position:
               
27-697
               

               
Cow position:
               
chr18:51839123-51838425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
33-790
               

               
Cow position:
               
chr18:55523332-55524105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
53-761
               

               
Cow position:
               
chr18:50271422-50272140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
64-789
               

               
Cow position:
               
chr18:54966922-54967663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 33
               

               
Conread position:
               
67-705
               

               
Cow position:
               
chr18:54979450-54980099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
51, 429
               

               
Conread position:
               
69-794
               

               
Cow position:
               
chr18:50049251-50048507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 172
               

               
Conread position:
               
70-789
               

               
Cow position:
               
chr18:55017773-55018507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 167
               

               
Conread position:
               
74-749
               

               
Cow position:
               
chr18:43023090-43022404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 226
               

               
Conread position:
               
75-705
               

               
Cow position:
               
chr18:51874045-51874679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 114
               

               
Conread position:
               
80-452
               

               
Cow position:
               
chr18:43048741-43048357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 213
               

               
Conread position:
               
82-785
               

               
Cow position:
               
chr18:42744728-42744010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 216
               

               
Conread position:
               
96-666
               

               
Cow position:
               
chr18:42827407-42827993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 455
               

               
Conread position:
               
99-789
               

               
Cow position:
               
chr18:53497987-53498684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 139
               

               
Conread position:
               
126-716
               

               
Cow position:
               
chr18:51766037-51765448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
95, 103
               

               
Conread position:
               
126-750
               

               
Cow position:
               
chr18:50281719-50282342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 99
               

               
Conread position:
               
127-761
               

               
Cow position:
               
chr18:42693750-42693118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
130-761
               

               
Cow position:
               
chr18:50245875-50246504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
131-704
               

               
Cow position:
               
chr18:50281640-50282212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
131-749
               

               
Cow position:
               
chr18:53610333-53609716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
88, 94
               

               
Conread position:
               
131-761
               

               
Cow position:
               
chr18:50059657-50059028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 409
               

               
Conread position:
               
131-761
               

               
Cow position:
               
chr18:50295238-50295867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
508, 413
               

               
Conread position:
               
131-787
               

               
Cow position:
               
chr18:43167674-43168333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
131-789
               

               
Cow position:
               
chr18:50059237-50058576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
132-677
               

               
Cow position:
               
chr18:51752284-51751740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 179
               

               
Conread position:
               
132-704
               

               
Cow position:
               
chr18:44154487-44153914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 255
               

               
Conread position:
               
132-761
               

               
Cow position:
               
chr18:51400331-51400959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 202
               

               
Conread position:
               
132-784
               

               
Cow position:
               
chr18:42675354-42674699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 154
               

               
Conread position:
               
132-784
               

               
Cow position:
               
chr18:51789758-51789103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
506, 412
               

               
Conread position:
               
132-789
               

               
Cow position:
               
chr18:42837885-42837225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 164
               

               
Conread position:
               
132-789
               

               
Cow position:
               
chr18:44184919-44184259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 108
               

               
Conread position:
               
133-705
               

               
Cow position:
               
chr18:50031014-50030441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 77
               

               
Conread position:
               
133-751
               

               
Cow position:
               
chr18:14453968-14453351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 153
               

               
Conread position:
               
133-751
               

               
Cow position:
               
chr18:42837968-42837351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
134-751
               

               
Cow position:
               
chr18:55008612-55009228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 89
               

               
Conread position:
               
134-789
               

               
Cow position:
               
chr18:54967088-54967743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 230
               

               
Conread position:
               
137-691
               

               
Cow position:
               
chr18:55523784-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
76, 89
               

               
Conread position:
               
137-757
               

               
Cow position:
               
chr18:40075079-40075698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
137-789
               

               
Cow position:
               
chr18:42985588-42984933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 322
               

               
Conread position:
               
138-705
               

               
Cow position:
               
chr18:40086541-40085981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 164
               

               
Conread position:
               
138-751
               

               
Cow position:
               
chr18:1417975-1418587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 0
               

               
Conread position:
               
138-751
               

               
Cow position:
               
chr18:55017937-55018549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
138-760
               

               
Cow position:
               
chr18:50271434-50272055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 171
               

               
Conread position:
               
138-761
               

               
Cow position:
               
chr18:52012468-52011848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
138-761
               

               
Cow position:
               
chr18:56330130-56329508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 178
               

               
Conread position:
               
138-787
               

               
Cow position:
               
chr18:55067053-55066401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 94
               

               
Conread position:
               
138-789
               

               
Cow position:
               
chr18:51812995-51812340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 165
               

               
Conread position:
               
142-751
               

               
Cow position:
               
chr18:53525753-53526361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
68, 100
               

               
Conread position:
               
142-761
               

               
Cow position:
               
chr18:42790941-42791559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
397, 0
               

               
Conread position:
               
146-761
               

               
Cow position:
               
chr18:56128438-56129052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 92
               

               
Conread position:
               
147-704
               

               
Cow position:
               
chr18:50250984-50251537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
61, 78
               

               
Conread position:
               
147-723
               

               
Cow position:
               
chr18:51874045-51874613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
396, 112
               

               
Conread position:
               
147-749
               

               
Cow position:
               
chr18:33093040-33092439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
163, 150
               

               
Conread position:
               
147-751
               

               
Cow position:
               
chr18:56316115-56316718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
147-789
               

               
Cow position:
               
chr18:54992802-54993447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
147-797
               

               
Cow position:
               
chr18:40074921-40075573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
116, 107
               

               
Conread position:
               
147-807
               

               
Cow position:
               
chr18:43167606-43168272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 102
               

               
Conread position:
               
148-785
               

               
Cow position:
               
chr18:43175778-43175153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
400, 56
               

               
Conread position:
               
152-807
               

               
Cow position:
               
chr18:56248172-56247506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
319, 265
               

               
Conread position:
               
157-684
               

               
Cow position:
               
chr18:42724764-42724238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 123
               

               
Conread position:
               
157-710
               

               
Cow position:
               
chr18:51400272-51400824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
390, 0
               

               
Conread position:
               
157-749
               

               
Cow position:
               
chr18:49033390-49032799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
472, 377
               

               
Conread position:
               
158-761
               

               
Cow position:
               
chr18:51789816-51789214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 235
               

               
Conread position:
               
158-761
               

               
Cow position:
               
chr18:51839484-51838882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
386, 0
               

               
Conread position:
               
159-808
               

               
Cow position:
               
chr18:42694054-42693399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
159-811
               

               
Cow position:
               
chr18:40324806-40324150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 150
               

               
Conread position:
               
160-705
               

               
Cow position:
               
chr18:52427544-52428088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
146, 150
               

               
Conread position:
               
164-757
               

               
Cow position:
               
chr18:50848085-50848676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
164-787
               

               
Cow position:
               
chr18:42790879-42791505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 299
               

               
Conread position:
               
164-787
               

               
Cow position:
               
chr18:56493843-56494469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
164-792
               

               
Cow position:
               
chr18:50022491-50021853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 386
               

               
Conread position:
               
165-535
               

               
Cow position:
               
chr18:43048728-43048358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 141
               

               
Conread position:
               
165-704
               

               
Cow position:
               
chr18:53587083-53586545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
128, 151
               

               
Conread position:
               
165-705
               

               
Cow position:
               
chr18:22634640-22635179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
134, 121
               

               
Conread position:
               
165-705
               

               
Cow position:
               
chr18:51838786-51838252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
130, 136
               

               
Conread position:
               
165-743
               

               
Cow position:
               
chr18:14454020-14453443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 150
               

               
Conread position:
               
165-749
               

               
Cow position:
               
chr18:53509238-53509821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
165-751
               

               
Cow position:
               
chr18:55067110-55066525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
165-751
               

               
Cow position:
               
chr18:56128121-56128706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 64
               

               
Conread position:
               
165-755
               

               
Cow position:
               
chr18:40086936-40086343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
165-757
               

               
Cow position:
               
chr18:53525692-53526283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
165-757
               

               
Cow position:
               
chr18:54992736-54993327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
165-761
               

               
Cow position:
               
chr18:53610467-53609872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 245
               

               
Conread position:
               
165-761
               

               
Cow position:
               
chr18:56316049-56316644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
165-785
               

               
Cow position:
               
chr18:44184802-44184179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
165-785
               

               
Cow position:
               
chr18:53559842-53560465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
588, 388
               

               
Conread position:
               
165-789
               

               
Cow position:
               
chr18:56247729-56247112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
585, 210
               

               
Conread position:
               
165-802
               

               
Cow position:
               
chr18:33064938-33064300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 107
               

               
Conread position:
               
165-809
               

               
Cow position:
               
chr18:41197575-41198225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
166-761
               

               
Cow position:
               
chr18:44254054-44253464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
115, 138
               

               
Conread position:
               
167-733
               

               
Cow position:
               
chr18:42827406-42827976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
503, 371
               

               
Conread position:
               
167-749
               

               
Cow position:
               
chr18:40324882-40324301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 272
               

               
Conread position:
               
167-751
               

               
Cow position:
               
chr18:56330185-56329602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 120
               

               
Conread position:
               
167-757
               

               
Cow position:
               
chr18:50098977-50099568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 148
               

               
Conread position:
               
167-789
               

               
Cow position:
               
chr18:42744715-42744090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 134
               

               
Conread position:
               
167-808
               

               
Cow position:
               
chr18:50049225-50048574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 247
               

               
Conread position:
               
167-809
               

               
Cow position:
               
chr18:43093992-43093356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 134
               

               
Conread position:
               
168-711
               

               
Cow position:
               
chr18:53610380-53609838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
148, 118
               

               
Conread position:
               
169-784
               

               
Cow position:
               
chr18:52427637-52428255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
475, 384
               

               
Conread position:
               
170-752
               

               
Cow position:
               
chr18:33093101-33092520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 292
               

               
Conread position:
               
172-749
               

               
Cow position:
               
chr18:56247808-56247238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
172-790
               

               
Cow position:
               
chr18:1417925-1418547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
173-424
               

               
Cow position:
               
chr18:51873708-51873959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 136
               

               
Conread position:
               
178-761
               

               
Cow position:
               
chr18:50295201-50295783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 140
               

               
Conread position:
               
179-785
               

               
Cow position:
               
chr18:54967637-54968241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
137, 68
               

               
Conread position:
               
181-749
               

               
Cow position:
               
chr18:51839545-51838978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 376
               

               
Conread position:
               
183-686
               

               
Cow position:
               
chr18:53571829-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
183-757
               

               
Cow position:
               
chr18:51752316-51751742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
223-757
               

               
Cow position:
               
chr18:50098949-50099484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 238
               

               
Conread position:
               
238-761
               

               
Cow position:
               
chr18:50281664-50282185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 15
               

               
Conread position:
               
241-700
               

               
Cow position:
               
chr18:43048736-43048281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
241-751
               

               
Cow position:
               
chr18:53498469-53498978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
138, 67
               

               
Conread position:
               
241-751
               

               
Cow position:
               
chr18:54992728-54993237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
397, 297
               

               
Conread position:
               
241-787
               

               
Cow position:
               
chr18:53509230-53509779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
241-787
               

               
Cow position:
               
chr18:53525684-53526233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
242-758
               

               
Cow position:
               
chr18:50250835-50251341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
469, 64
               

               
Conread position:
               
245-761
               

               
Cow position:
               
chr18:51766085-51765571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
246-785
               

               
Cow position:
               
chr18:42837939-42837397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
461, 298
               

               
Conread position:
               
249-686
               

               
Cow position:
               
chr18:14453288-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
249-705
               

               
Cow position:
               
chr18:40074939-40075394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
249-761
               

               
Cow position:
               
chr18:14454020-14453509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
43, 48
               

               
Conread position:
               
249-761
               

               
Cow position:
               
chr18:51838786-51838280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
150, 139
               

               
Conread position:
               
249-785
               

               
Cow position:
               
chr18:41949348-41948809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
249-790
               

               
Cow position:
               
chr18:42675489-42674944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 60
               

               
Conread position:
               
251-749
               

               
Cow position:
               
chr18:42827406-42827903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
380, 286
               

               
Conread position:
               
251-761
               

               
Cow position:
               
chr18:51368768-51368259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
253-761
               

               
Cow position:
               
chr18:49033378-49032871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
253-799
               

               
Cow position:
               
chr18:52432986-52433537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
53, 57
               

               
Conread position:
               
259-793
               

               
Cow position:
               
chr18:41197501-41198039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
262-692
               

               
Cow position:
               
chr18:56248225-56247807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
266-751
               

               
Cow position:
               
chr18:51400297-51400781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
457, 277
               

               
Conread position:
               
300-784
               

               
Cow position:
               
chr18:52427515-52428003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
300-805
               

               
Cow position:
               
chr18:52432864-52433376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
308-807
               

               
Cow position:
               
chr18:42827380-42827884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 6
               

               
Conread position:
               
310-749
               

               
Cow position:
               
chr18:51874040-51874471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
410, 119
               

               
Conread position:
               
310-757
               

               
Cow position:
               
chr18:50083257-50083705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
313-704
               

               
Cow position:
               
chr18:41949368-41948978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 221
               

               
Conread position:
               
314-761
               

               
Cow position:
               
chr18:50031001-50030553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
159, 70
               

               
Conread position:
               
315-705
               

               
Cow position:
               
chr18:50245723-50246112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
30, 34
               

               
Conread position:
               
316-751
               

               
Cow position:
               
chr18:22634623-22635057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
139, 149
               

               
Conread position:
               
321-761
               

               
Cow position:
               
chr18:49033394-49032955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
321-838
               

               
Cow position:
               
chr18:43048740-43048220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
444, 230
               

               
Conread position:
               
323-751
               

               
Cow position:
               
chr18:49022302-49022727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 87
               

               
Conread position:
               
323-751
               

               
Cow position:
               
chr18:54966856-54967284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
323-751
               

               
Cow position:
               
chr18:54979381-54979809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
326-710
               

               
Cow position:
               
chr18:44154461-44154075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 151
               

               
Conread position:
               
326-749
               

               
Cow position:
               
chr18:14453295-14452873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 70
               

               
Conread position:
               
326-757
               

               
Cow position:
               
chr18:49021728-49022159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
245, 206
               

               
Conread position:
               
326-761
               

               
Cow position:
               
chr18:53610474-53610040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
326-789
               

               
Cow position:
               
chr18:54979469-54979935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
146, 133
               

               
Conread position:
               
326-790
               

               
Cow position:
               
chr18:43094001-43093545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
74, 70
               

               
Conread position:
               
326-793
               

               
Cow position:
               
chr18:54966944-54967415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
197, 203
               

               
Conread position:
               
328-705
               

               
Cow position:
               
chr18:14454025-14453649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
298, 211
               

               
Conread position:
               
328-762
               

               
Cow position:
               
chr18:53636137-53635700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 74
               

               
Conread position:
               
328-762
               

               
Cow position:
               
chr18:56128028-56128465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 43
               

               
Conread position:
               
329-751
               

               
Cow position:
               
chr18:50031070-50030650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
272, 131
               

               
Conread position:
               
331-700
               

               
Cow position:
               
chr18:42724674-42724306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 54
               

               
Conread position:
               
331-719
               

               
Cow position:
               
chr18:56330189-56329802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
119, 130
               

               
Conread position:
               
331-787
               

               
Cow position:
               
chr18:56493842-56494301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 158
               

               
Conread position:
               
334-603
               

               
Cow position:
               
chr18:43053458-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
334-784
               

               
Cow position:
               
chr18:40324883-40324430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 213
               

               
Conread position:
               
335-629
               

               
Cow position:
               
chr18:22634894-22635186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
146, 124
               

               
Conread position:
               
335-794
               

               
Cow position:
               
chr18:44239759-44240221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
338-722
               

               
Cow position:
               
chr18:55497617-55497234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
300, 196
               

               
Conread position:
               
339-784
               

               
Cow position:
               
chr18:53559763-53560212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
341-789
               

               
Cow position:
               
chr18:55008485-55008934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
131, 71
               

               
Conread position:
               
342-751
               

               
Cow position:
               
chr18:53610542-53610134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
342-800
               

               
Cow position:
               
chr18:41197500-41197964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 197
               

               
Conread position:
               
345-752
               

               
Cow position:
               
chr18:55008571-55008977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
289, 202
               

               
Conread position:
               
350-644
               

               
Cow position:
               
chr18:51873717-51874010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
99, 116
               

               
Conread position:
               
351-789
               

               
Cow position:
               
chr18:56493775-56494219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
59, 223
               

               
Conread position:
               
353-759
               

               
Cow position:
               
chr18:43167560-43167964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
153, 136
               

               
Conread position:
               
355-761
               

               
Cow position:
               
chr18:50031128-50030724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
355-761
               

               
Cow position:
               
chr18:51752313-51751908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
356-794
               

               
Cow position:
               
chr18:50098914-50099356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
95, 106
               

               
Conread position:
               
357-708
               

               
Cow position:
               
chr18:55075112-55075463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 102
               

               
Conread position:
               
366-751
               

               
Cow position:
               
chr18:50271409-50271794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
6, 55
               

               
Conread position:
               
383-784
               

               
Cow position:
               
chr18:43023105-43022701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
395-705
               

               
Cow position:
               
chr18:52446918-52447227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
395-757
               

               
Cow position:
               
chr18:51970318-51970673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 59
               

               
Conread position:
               
399-805
               

               
Cow position:
               
chr18:51874045-51874450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
354, 114
               

               
Conread position:
               
401-789
               

               
Cow position:
               
chr18:33093122-33092731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
404-784
               

               
Cow position:
               
chr18:44398454-44398069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
8, 120
               

               
Conread position:
               
411-751
               

               
Cow position:
               
chr18:55067116-55066777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
218, 155
               

               
Conread position:
               
412-789
               

               
Cow position:
               
chr18:33064943-33064563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
419-687
               

               
Cow position:
               
chr18:43053457-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
429-760
               

               
Cow position:
               
chr18:51839549-51839217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
321, 116
               

               
Conread position:
               
473-704
               

               
Cow position:
               
chr18:44239729-44239959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
492-789
               

               
Cow position:
               
chr18:56248245-56247952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
510-757
               

               
Cow position:
               
chr18:51873709-51873957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
553-751
               

               
Cow position:
               
chr18:43053408-43053210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
580-809
               

               
Cow position:
               
chr18:14453294-14453058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 44
               
Show alignments to all cow chromosomes.