Cow genome map
| Conread name: | Ss1.1-rpfco0102_k14.5 |
| Conread position: | 2-713 |
| Cow position: | chr2:78755327-78756045 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 9 |
| Conread position: | 2-766 |
| Cow position: | chr2:86465509-86466283 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 466 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 124, 245 |
| Conread position: | 2-810 |
| Cow position: | chr2:78754503-78755313 (view UCSC Genome Browser custom track) |
| Alignm length: | 828 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 187 |
| Conread position: | 2-812 |
| Cow position: | chr2:78754587-78755398 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 104 |
| Conread position: | 3-426 |
| Cow position: | chr2:78755996-78756428 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 118 |
| Conread position: | 3-645 |
| Cow position: | chr2:5874770-5874117 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 381 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 123, 238 |
| Conread position: | 3-812 |
| Cow position: | chr2:78755160-78755983 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 177 |
| Conread position: | 8-771 |
| Cow position: | chr2:78754997-78755767 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 229 |
| Conread position: | 11-496 |
| Cow position: | chr2:82799946-82800443 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 11-761 |
| Cow position: | chr2:86465434-86466195 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 459 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 65, 61 |
| Conread position: | 11-785 |
| Cow position: | chr2:82799610-82800399 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 220 |
| Conread position: | 12-677 |
| Cow position: | chr2:78755753-78756426 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 56 |
| Conread position: | 12-697 |
| Cow position: | chr2:82799863-82800553 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 12-751 |
| Cow position: | chr2:82799695-82800445 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 237 |
| Conread position: | 12-757 |
| Cow position: | chr2:78754917-78755671 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 226 |
| Conread position: | 12-784 |
| Cow position: | chr2:78754347-78755116 (view UCSC Genome Browser custom track) |
| Alignm length: | 789 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 95 |
| Conread position: | 13-702 |
| Cow position: | chr2:5875180-5874480 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 421 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 115, 313 |
| Conread position: | 14-705 |
| Cow position: | chr2:78755589-78756290 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 69 |
| Conread position: | 18-761 |
| Cow position: | chr2:82799533-82800287 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 301 |
| Conread position: | 19-812 |
| Cow position: | chr2:78755510-78756318 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 246 |
| Conread position: | 74-705 |
| Cow position: | chr2:78754811-78755452 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 313 |
| Conread position: | 138-701 |
| Cow position: | chr2:5874704-5874145 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 349 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 164-540 |
| Cow position: | chr2:48689545-48689168 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 171-812 |
| Cow position: | chr2:78754101-78754739 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 394 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 42, 33 |
| Conread position: | 178-705 |
| Cow position: | chr2:86465109-86465635 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 325 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 153, 157 |
| Conread position: | 182-751 |
| Cow position: | chr2:82799457-82800025 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 134 |
| Conread position: | 327-789 |
| Cow position: | chr2:86465174-86465639 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 295 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 87, 93 |
| Conread position: | 415-751 |
| Cow position: | chr2:48689546-48689211 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 421-761 |
| Cow position: | chr2:5875180-5874841 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 297, 126 |
Show alignments to all cow chromosomes.