Cow genome map
| Conread name: | Ss1.1-rpfco0102_k14.5 |
| Conread position: | 3-508 |
| Cow position: | chr21:34223060-34222543 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 328 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 123, 235 |
| Conread position: | 12-426 |
| Cow position: | chr21:34222967-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 117, 308 |
| Conread position: | 12-689 |
| Cow position: | chr21:12658917-12659605 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 405 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 114, 225 |
| Conread position: | 12-761 |
| Cow position: | chr21:12658833-12659593 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 437 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 118, 225 |
| Conread position: | 12-768 |
| Cow position: | chr21:12659253-12660020 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 448 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 46, 42 |
| Conread position: | 132-682 |
| Cow position: | chr21:12608881-12608332 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 402, 0 |
| Conread position: | 146-763 |
| Cow position: | chr21:12608531-12607913 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 353 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 154, 140 |
| Conread position: | 147-620 |
| Cow position: | chr21:34223072-34222600 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 140 |
| Conread position: | 147-761 |
| Cow position: | chr21:34223153-34222543 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 378 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 46, 41 |
| Conread position: | 164-683 |
| Cow position: | chr21:12659249-12659767 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 305 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 405, 370 |
| Conread position: | 165-704 |
| Cow position: | chr21:12659166-12659704 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 165-722 |
| Cow position: | chr21:12658914-12659470 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 388, 0 |
| Conread position: | 165-751 |
| Cow position: | chr21:12658830-12659415 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 344 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 454, 369 |
| Conread position: | 223-761 |
| Cow position: | chr21:12658804-12659341 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 310-760 |
| Cow position: | chr21:34223158-34222710 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 281 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 50, 46 |
| Conread position: | 327-757 |
| Cow position: | chr21:12608854-12608425 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 327-761 |
| Cow position: | chr21:34223060-34222627 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 216 |
| Conread position: | 331-704 |
| Cow position: | chr21:12608766-12608394 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 285, 201 |
| Conread position: | 357-761 |
| Cow position: | chr21:12608908-12608505 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 273, 175 |
Show alignments to all cow chromosomes.