Cow genome map

Conread name: Ss1.1-rpfco0102_k14.5

Conread position: 2-533
Cow position:
Alignm length: 547
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 95

Conread position: 5-812
Cow position:
Alignm length: 828
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 545

Conread position: 8-653
Cow position:
Alignm length: 659
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 63

Conread position: 10-626
Cow position:
Alignm length: 632
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 26

Conread position: 10-744
Cow position:
Alignm length: 744
Alignm identity: 434
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 72

Conread position: 11-284
Cow position:
Alignm length: 287
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 225

Conread position: 11-721
Cow position:
Alignm length: 725
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 540

Conread position: 12-359
Cow position:
Alignm length: 360
Alignm identity: 228
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 330

Conread position: 12-426
Cow position:
Alignm length: 429
Alignm identity: 268
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 57

Conread position: 12-429
Cow position:
Alignm length: 432
Alignm identity: 283
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 114, 286

Conread position: 12-469
Cow position:
Alignm length: 474
Alignm identity: 294
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 58

Conread position: 12-496
Cow position:
Alignm length: 497
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 12-509
Cow position:
Alignm length: 514
Alignm identity: 320
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 63

Conread position: 12-577
Cow position:
Alignm length: 578
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 539

Conread position: 12-677
Cow position:
Alignm length: 680
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 216

Conread position: 12-750
Cow position:
Alignm length: 767
Alignm identity: 470
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 54, 64

Conread position: 12-751
Cow position:
Alignm length: 758
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 302

Conread position: 12-751
Cow position:
Alignm length: 753
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 298

Conread position: 15-752
Cow position:
Alignm length: 755
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 61

Conread position: 22-767
Cow position:
Alignm length: 761
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 49

Conread position: 27-582
Cow position:
Alignm length: 573
Alignm identity: 356
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 103, 151

Conread position: 27-633
Cow position:
Alignm length: 624
Alignm identity: 387
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 36, 48

Conread position: 36-612
Cow position:
Alignm length: 577
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 503, 0

Conread position: 109-761
Cow position:
Alignm length: 659
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 112

Conread position: 132-666
Cow position:
Alignm length: 538
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 154

Conread position: 138-701
Cow position:
Alignm length: 566
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 134

Conread position: 144-789
Cow position:
Alignm length: 652
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 165

Conread position: 147-761
Cow position:
Alignm length: 615
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 0

Conread position: 153-749
Cow position:
Alignm length: 599
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 11

Conread position: 164-761
Cow position:
Alignm length: 599
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 140

Conread position: 165-446
Cow position:
Alignm length: 286
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 142, 121

Conread position: 165-496
Cow position:
Alignm length: 332
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 165-716
Cow position:
Alignm length: 553
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 515, 373

Conread position: 165-809
Cow position:
Alignm length: 652
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 584, 373

Conread position: 166-752
Cow position:
Alignm length: 588
Alignm identity: 354
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 478, 367

Conread position: 168-790
Cow position:
Alignm length: 632
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 27

Conread position: 176-542
Cow position:
Alignm length: 370
Alignm identity: 237
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 152, 147

Conread position: 188-542
Cow position:
Alignm length: 356
Alignm identity: 230
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 125, 115

Conread position: 242-751
Cow position:
Alignm length: 510
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 0

Conread position: 243-712
Cow position:
Alignm length: 471
Alignm identity: 296
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 72

Conread position: 245-604
Cow position:
Alignm length: 362
Alignm identity: 232
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 10, 291

Conread position: 331-794
Cow position:
Alignm length: 469
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 208

Conread position: 336-761
Cow position:
Alignm length: 426
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 350-757
Cow position:
Alignm length: 409
Alignm identity: 260
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 102, 112

Conread position: 355-750
Cow position:
Alignm length: 397
Alignm identity: 255
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 114, 105

Conread position: 356-792
Cow position:
Alignm length: 444
Alignm identity: 280
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 53

Conread position: 357-752
Cow position:
Alignm length: 397
Alignm identity: 252
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 117, 51

Conread position: 397-752
Cow position:
Alignm length: 361
Alignm identity: 235
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 62

Conread position: 412-749
Cow position:
Alignm length: 340
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 11, 128

Conread position: 413-761
Cow position:
Alignm length: 349
Alignm identity: 216
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 130, 0

Conread position: 413-790
Cow position:
Alignm length: 385
Alignm identity: 249
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 230, 124

Conread position: 415-749
Cow position:
Alignm length: 336
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 308, 122

Conread position: 499-751
Cow position:
Alignm length: 254
Alignm identity: 164
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 145, 46

Conread position: 528-751
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 101, 15

Show alignments to all cow chromosomes.