Cow genome map
| Conread name: | Ss1.1-rpfco0102_k14.5 |
| Conread position: | 2-784 |
| Cow position: | chr24:17036472-17035675 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 323 |
| Conread position: | 3-761 |
| Cow position: | chr24:17036303-17035534 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 472 |
| Conread position: | 11-751 |
| Cow position: | chr24:17036547-17035796 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 357 |
| Conread position: | 12-429 |
| Cow position: | chr24:17070627-17071056 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 112, 226 |
| Conread position: | 12-613 |
| Cow position: | chr24:17078093-17077482 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 534 |
| Conread position: | 12-690 |
| Cow position: | chr24:17035622-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 409 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 114, 549 |
| Conread position: | 12-751 |
| Cow position: | chr24:17036126-17035376 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 316 |
| Conread position: | 12-751 |
| Cow position: | chr24:17078261-17077511 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 539 |
| Conread position: | 12-754 |
| Cow position: | chr24:17035874-17035121 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 287 |
| Conread position: | 27-761 |
| Cow position: | chr24:17036612-17035870 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 132-761 |
| Cow position: | chr24:17078297-17077668 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 627, 415 |
| Conread position: | 147-446 |
| Cow position: | chr24:17013227-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 83, 79 |
| Conread position: | 147-685 |
| Cow position: | chr24:17070522-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 316 |
| Conread position: | 152-761 |
| Cow position: | chr24:17036642-17036038 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 171-757 |
| Cow position: | chr24:17070462-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 106 |
| Conread position: | 304-787 |
| Cow position: | chr24:17070427-17070913 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 235 |
| Conread position: | 331-789 |
| Cow position: | chr24:17070370-17070831 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 292 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 64, 57 |
| Conread position: | 336-536 |
| Cow position: | chr24:17013248-17013448 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 114, 127 |
| Conread position: | 337-730 |
| Cow position: | chr24:17013165-17013557 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 138, 123 |
| Conread position: | 413-761 |
| Cow position: | chr24:17070368-17070715 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 52 |
| Conread position: | 418-751 |
| Cow position: | chr24:17013162-17013494 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 130, 0 |
Show alignments to all cow chromosomes.