Cow genome map


           Conread name:
           Ss1.1-rpfco0102_k14.5
        

               Conread position:
               9-496
               

               Cow position:
               chr29:39627343-39626847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               313
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               55, 67
               

               Conread position:
               13-542
               

               Cow position:
               chr29:39627423-39626885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               339
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               132-655
               

               Cow position:
               chr29:39627376-39626857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               322
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               88, 96
               

               Conread position:
               158-426
               

               Cow position:
               chr29:39627101-39626833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               62, 68
               

               Conread position:
               267-710
               

               Cow position:
               chr29:39627577-39627138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 43
               

               Conread position:
               350-698
               

               Cow position:
               chr29:39627578-39627234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               100, 112
               

               Conread position:
               397-749
               

               Cow position:
               chr29:39627615-39627264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               241, 150
               
Show alignments to all cow chromosomes.