Cow genome map
| Conread name: | Ss1.1-rpfco0102_k14.5 |
| Conread position: | 2-421 |
| Cow position: | chr3:68045927-68046356 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 281 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 64, 54 |
| Conread position: | 2-451 |
| Cow position: | chr3:77351083-77350632 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 292 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 2-680 |
| Cow position: | chr3:62742352-62743032 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 247 |
| Conread position: | 8-756 |
| Cow position: | chr3:68045598-68046356 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 11-537 |
| Cow position: | chr3:68027175-68027713 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 337 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 114, 311 |
| Conread position: | 12-425 |
| Cow position: | chr3:62721989-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 12-626 |
| Cow position: | chr3:68027092-68027717 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 463 |
| Conread position: | 12-628 |
| Cow position: | chr3:62742861-62743466 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 370 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 12-705 |
| Cow position: | chr3:62742777-62743460 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 430 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 104, 221 |
| Conread position: | 12-749 |
| Cow position: | chr3:62742614-62743336 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 27 |
| Conread position: | 14-764 |
| Cow position: | chr3:62722323-62721561 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 300 |
| Conread position: | 20-705 |
| Cow position: | chr3:68027016-68027712 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 66-789 |
| Cow position: | chr3:62742249-62742982 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 242 |
| Conread position: | 132-784 |
| Cow position: | chr3:68045565-68046220 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 90 |
| Conread position: | 132-837 |
| Cow position: | chr3:62722277-62721565 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 156 |
| Conread position: | 159-690 |
| Cow position: | chr3:77351082-77350564 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 333 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 170-761 |
| Cow position: | chr3:68027010-68027600 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 195-761 |
| Cow position: | chr3:62722381-62721817 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 241-752 |
| Cow position: | chr3:77351167-77350668 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 327 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 190, 63 |
| Conread position: | 254-789 |
| Cow position: | chr3:68027010-68027548 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 290 |
| Conread position: | 315-710 |
| Cow position: | chr3:68026987-68027381 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 82, 63 |
| Conread position: | 315-761 |
| Cow position: | chr3:77351177-77350740 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 358-705 |
| Cow position: | chr3:62722387-62722041 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 78, 53 |
Show alignments to all cow chromosomes.