Cow genome map
| Conread name: | Ss1.1-rpfco0102_k14.5 |
| Conread position: | 2-706 |
| Cow position: | chr8:45201260-45201975 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 549 |
| Conread position: | 2-740 |
| Cow position: | chr8:46816623-46817372 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 322 |
| Conread position: | 2-828 |
| Cow position: | chr8:46816371-46817215 (view UCSC Genome Browser custom track) |
| Alignm length: | 849 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 553 |
| Conread position: | 2-1029 |
| Cow position: | chr8:46815864-46816900 (view UCSC Genome Browser custom track) |
| Alignm length: | 1055 |
| Alignm identity: | 673 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 51 |
| Conread position: | 4-751 |
| Cow position: | chr8:48407638-48406880 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 288 |
| Conread position: | 8-789 |
| Cow position: | chr8:46815957-46816753 (view UCSC Genome Browser custom track) |
| Alignm length: | 800 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 316 |
| Conread position: | 8-803 |
| Cow position: | chr8:46816293-46817106 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 217 |
| Conread position: | 9-807 |
| Cow position: | chr8:46815712-46816522 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 73 |
| Conread position: | 11-696 |
| Cow position: | chr8:48407463-48406767 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 302 |
| Conread position: | 11-756 |
| Cow position: | chr8:48407127-48406369 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 227 |
| Conread position: | 11-767 |
| Cow position: | chr8:55580905-55581676 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 554 |
| Conread position: | 12-499 |
| Cow position: | chr8:55581242-55581741 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 318 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 52, 58 |
| Conread position: | 12-711 |
| Cow position: | chr8:48407378-48406668 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 12-723 |
| Cow position: | chr8:45201186-45201908 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 42 |
| Conread position: | 12-749 |
| Cow position: | chr8:46816549-46817297 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 228 |
| Conread position: | 12-750 |
| Cow position: | chr8:55580990-55581739 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 538 |
| Conread position: | 12-751 |
| Cow position: | chr8:48407294-48406544 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 456 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 112, 459 |
| Conread position: | 12-764 |
| Cow position: | chr8:48407042-48406279 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 309 |
| Conread position: | 12-809 |
| Cow position: | chr8:46816213-46817028 (view UCSC Genome Browser custom track) |
| Alignm length: | 821 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 12-809 |
| Cow position: | chr8:46816465-46817280 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 545 |
| Conread position: | 14-789 |
| Cow position: | chr8:45200936-45201726 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 307 |
| Conread position: | 18-814 |
| Cow position: | chr8:45201360-45202164 (view UCSC Genome Browser custom track) |
| Alignm length: | 816 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 449 |
| Conread position: | 25-782 |
| Cow position: | chr8:55580835-55581607 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 131-751 |
| Cow position: | chr8:45200897-45201516 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 179 |
| Conread position: | 138-757 |
| Cow position: | chr8:45200820-45201440 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 491, 400 |
| Conread position: | 165-756 |
| Cow position: | chr8:55580819-55581411 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 15 |
| Conread position: | 308-749 |
| Cow position: | chr8:6958024-6957587 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 330, 248 |
| Conread position: | 327-789 |
| Cow position: | chr8:46815622-46816081 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 289 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 205, 161 |
| Conread position: | 356-804 |
| Cow position: | chr8:45200786-45201235 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 357, 182 |
| Conread position: | 394-789 |
| Cow position: | chr8:48407656-48407258 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 72, 65 |
| Conread position: | 441-697 |
| Cow position: | chr8:6958059-6957804 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 476-760 |
| Cow position: | chr8:48407658-48407373 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 528-749 |
| Cow position: | chr8:6958056-6957836 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.