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Cow genome map

           
Conread name:
           
Ss1.1-rpfco0128_b15.5
        

               
Conread position:
               
1-152
               

               
Cow position:
               
chr17:43527786-43527942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr17:25078185-25078029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr17:32554217-32554041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr17:38116221-38116410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr17:4606778-4606967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
159, 62
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr17:4472995-4472805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr17:22781498-22781707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
81, 200
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr17:5041867-5041655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr17:15067817-15067580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 119
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr17:24761417-24761173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr17:40892958-40893206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 95
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr17:1783798-1783543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 154
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr17:26183031-26183314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr17:25542003-25541716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 122
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr17:38646873-38647162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr17:3503397-3503723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr17:24821678-24822033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr17:9746327-9746697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr17:7697864-7698256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
81, 134
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr17:18472987-18473380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 161
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr17:22775196-22775592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
161, 14
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr17:32471984-32471560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 313
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr17:3202588-3202182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr17:20022708-20022285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 305
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr17:25901006-25901437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr17:36790953-36791353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr17:12220123-12219772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr17:1035789-1035366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 280
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr17:12929732-12929300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 315
               

               
Conread position:
               
4-417
               

               
Cow position:
               
chr17:15684321-15684732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr17:3577354-3577756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 161
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr17:41029770-41029992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 167
               

               
Conread position:
               
7-288
               

               
Cow position:
               
chr17:43141899-43141608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
7-359
               

               
Cow position:
               
chr17:29157235-29157586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
8-180
               

               
Cow position:
               
chr17:30999593-30999760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 77
               

               
Conread position:
               
8-245
               

               
Cow position:
               
chr17:2079578-2079818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
8-390
               

               
Cow position:
               
chr17:24077220-24077598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
8-417
               

               
Cow position:
               
chr17:908564-908968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 124
               

               
Conread position:
               
8-417
               

               
Cow position:
               
chr17:10459118-10458705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 59
               

               
Conread position:
               
8-417
               

               
Cow position:
               
chr17:12946548-12946130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
10-101
               

               
Cow position:
               
chr17:2729977-2729886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-110
               

               
Cow position:
               
chr17:23517348-23517246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
10-130
               

               
Cow position:
               
chr17:20269422-20269544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
10-160
               

               
Cow position:
               
chr17:21412427-21412273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 111
               

               
Conread position:
               
10-160
               

               
Cow position:
               
chr17:21710325-21710478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
10-163
               

               
Cow position:
               
chr17:3258316-3258471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
10-166
               

               
Cow position:
               
chr17:1358978-1358822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
10-170
               

               
Cow position:
               
chr17:3498844-3498680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
10-172
               

               
Cow position:
               
chr17:36203670-36203506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
102, 81
               

               
Conread position:
               
10-175
               

               
Cow position:
               
chr17:3518432-3518264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
10-176
               

               
Cow position:
               
chr17:35371996-35371835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
10-177
               

               
Cow position:
               
chr17:25168130-25168309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
10-179
               

               
Cow position:
               
chr17:27667374-27667195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
10-180
               

               
Cow position:
               
chr17:7041125-7040953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
87, 127
               

               
Conread position:
               
10-186
               

               
Cow position:
               
chr17:11386334-11386515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
93, 145
               

               
Conread position:
               
10-189
               

               
Cow position:
               
chr17:23337193-23337013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
96, 77
               

               
Conread position:
               
10-193
               

               
Cow position:
               
chr17:3306687-3306873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
10-193
               

               
Cow position:
               
chr17:21017614-21017803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
72, 115
               

               
Conread position:
               
10-193
               

               
Cow position:
               
chr17:33052683-33052865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
10-206
               

               
Cow position:
               
chr17:20234047-20234248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
10-207
               

               
Cow position:
               
chr17:26084854-26085055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
10-208
               

               
Cow position:
               
chr17:21363227-21363427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
89, 156
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr17:18884529-18884309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
10-216
               

               
Cow position:
               
chr17:12216257-12216046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
72, 192
               

               
Conread position:
               
10-216
               

               
Cow position:
               
chr17:32651436-32651648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 191
               

               
Conread position:
               
10-217
               

               
Cow position:
               
chr17:3683838-3683630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr17:37480173-37479964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 75
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr17:4436411-4436199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr17:7760643-7760437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 91
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr17:17060862-17060645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr17:11056554-11056333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
10-235
               

               
Cow position:
               
chr17:20835413-20835643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
70, 178
               

               
Conread position:
               
10-235
               

               
Cow position:
               
chr17:20912717-20912936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
10-237
               

               
Cow position:
               
chr17:21312985-21312759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
31, 25
               

               
Conread position:
               
10-238
               

               
Cow position:
               
chr17:27679424-27679186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
72, 176
               

               
Conread position:
               
10-239
               

               
Cow position:
               
chr17:966919-966694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
88, 176
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr17:5896091-5895858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
64, 134
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr17:9565129-9565360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 153
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr17:30539427-30539206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr17:3781865-3782102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
89, 145
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr17:6624078-6624311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
89, 154
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr17:12059271-12059037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr17:13143870-13143633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
88, 202
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr17:21207315-21207086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
73, 120
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr17:24549989-24550232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr17:27765101-27765328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
152, 52
               

               
Conread position:
               
10-244
               

               
Cow position:
               
chr17:5695128-5694894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
10-244
               

               
Cow position:
               
chr17:33290991-33290753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
10-245
               

               
Cow position:
               
chr17:4612257-4612022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
10-247
               

               
Cow position:
               
chr17:1295751-1295511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
10-248
               

               
Cow position:
               
chr17:27305978-27306221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
72, 95
               

               
Conread position:
               
10-248
               

               
Cow position:
               
chr17:34208000-34207754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
10-251
               

               
Cow position:
               
chr17:20358698-20358930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
10-253
               

               
Cow position:
               
chr17:9778071-9778309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
10-258
               

               
Cow position:
               
chr17:3471241-3471490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 46
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr17:5733628-5733390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
167, 51
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr17:20839740-20839488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr17:21243967-21243709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
72, 134
               

               
Conread position:
               
10-267
               

               
Cow position:
               
chr17:5246715-5246974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 135
               

               
Conread position:
               
10-267
               

               
Cow position:
               
chr17:26224337-26224589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
120, 75
               

               
Conread position:
               
10-267
               

               
Cow position:
               
chr17:31231294-31231037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
10-272
               

               
Cow position:
               
chr17:8690620-8690357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
10-279
               

               
Cow position:
               
chr17:20870276-20870006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr17:14848703-14848446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
171, 60
               

               
Conread position:
               
10-285
               

               
Cow position:
               
chr17:34316889-34316619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 112
               

               
Conread position:
               
10-286
               

               
Cow position:
               
chr17:22806721-22806444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 144
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr17:37482259-37481969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
63, 204
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr17:40289184-40288900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 177
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr17:1275339-1275624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
34, 237
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr17:5224223-5224500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr17:11156673-11156393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
72, 157
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr17:18592260-18592543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 141
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr17:18860899-18860620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 86
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr17:25796520-25796236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
70, 202
               

               
Conread position:
               
10-297
               

               
Cow position:
               
chr17:40421488-40421781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
76, 114
               

               
Conread position:
               
10-350
               

               
Cow position:
               
chr17:39736005-39736337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
10-356
               

               
Cow position:
               
chr17:265476-265837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 168
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr17:9911583-9911927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 143
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr17:17405958-17406303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 75
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr17:21335878-21335519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 324
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr17:26764833-26765191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 173
               

               
Conread position:
               
10-358
               

               
Cow position:
               
chr17:20126434-20126768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr17:9117463-9117812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 191
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr17:20780330-20780687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 198
               

               
Conread position:
               
10-360
               

               
Cow position:
               
chr17:4213576-4213915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
251, 75
               

               
Conread position:
               
10-360
               

               
Cow position:
               
chr17:27047983-27048327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr17:1410423-1410064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 296
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr17:8079137-8079489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr17:24553824-24554172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 142
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr17:38832862-38833216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 189
               

               
Conread position:
               
10-365
               

               
Cow position:
               
chr17:923698-924047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
101, 86
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr17:1061242-1060868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
10-369
               

               
Cow position:
               
chr17:35126534-35126885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 43
               

               
Conread position:
               
10-380
               

               
Cow position:
               
chr17:34079278-34078916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr17:9697881-9697478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr17:30665092-30665474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 75
               

               
Conread position:
               
10-393
               

               
Cow position:
               
chr17:14249203-14248808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 196
               

               
Conread position:
               
10-397
               

               
Cow position:
               
chr17:5767734-5768108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 149
               

               
Conread position:
               
10-402
               

               
Cow position:
               
chr17:44924355-44923986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
152, 48
               

               
Conread position:
               
10-407
               

               
Cow position:
               
chr17:16371071-16371477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
72, 192
               

               
Conread position:
               
10-408
               

               
Cow position:
               
chr17:5000756-5000381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
10-408
               

               
Cow position:
               
chr17:6566291-6566704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr17:4601728-4601338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 162
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr17:21115128-21114732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr17:24587438-24587846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 255
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr17:32279087-32278681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 197
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr17:6936843-6936451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr17:21293225-21292811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr17:21959860-21959456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr17:23063532-23063949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
96, 268
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr17:27795468-27795882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr17:29292547-29292163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
83, 181
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr17:30713173-30713573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr17:33793002-33793379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
118, 51
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr17:36331146-36330740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr17:11362003-11362404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr17:24773503-24773904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
70, 112
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr17:24787201-24786797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 108
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:1256684-1256269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:5730743-5731147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 67
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:5898705-5898295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 125
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:6155861-6156262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:6423580-6423983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:7132635-7132195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
72, 376
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:7810919-7810518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:9853806-9854211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
70, 132
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:10446736-10447142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:10528921-10528501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
70, 230
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:11101974-11101589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 73
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:11216063-11215664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:11278212-11277798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:11381900-11381496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
24, 146
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:11618400-11618816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 225
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:11664771-11664348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:13922295-13922711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 296
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:13940502-13940089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 171
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:14033824-14033412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 146
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:15103068-15102660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 135
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:15664489-15664905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 52
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:16446609-16446197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:17059259-17059647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 50
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:17222162-17222573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:18720628-18720223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:20072255-20071874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:20157435-20157837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:20993219-20992809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:21004011-21003602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 264
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:21434909-21434499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
73, 111
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:21739064-21738636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 207
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:21973313-21972898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 309
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:24490341-24490770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 314
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:24824072-24824475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 85
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:24973771-24974172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 186
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:25815429-25815824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:26230759-26231194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:26818633-26818243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 152
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:27429398-27429785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
72, 123
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:29084023-29084396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
304, 36
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:29715366-29714985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
89, 122
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:31481225-31480801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
61, 212
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:32027642-32027218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 208
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:32989312-32989702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 49
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:32993794-32993398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:33933917-33933519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 52
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:34948461-34948866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
102, 73
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:36275177-36275565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
152, 48
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:37163707-37163316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
72, 134
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:38614776-38615192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 298
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:40312541-40312928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
311, 76
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:40331585-40332008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 171
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr17:43717493-43717111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
10-418
               

               
Cow position:
               
chr17:5423252-5422848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
10-418
               

               
Cow position:
               
chr17:5514579-5514987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
10-418
               

               
Cow position:
               
chr17:23101391-23100992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 117
               

               
Conread position:
               
10-419
               

               
Cow position:
               
chr17:15300050-15299619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
10-419
               

               
Cow position:
               
chr17:20090801-20090398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 111
               

               
Conread position:
               
10-420
               

               
Cow position:
               
chr17:12536648-12536242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 293
               

               
Conread position:
               
11-110
               

               
Cow position:
               
chr17:10432375-10432277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 58
               

               
Conread position:
               
11-170
               

               
Cow position:
               
chr17:3182764-3182601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
11-202
               

               
Cow position:
               
chr17:35184856-35185057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 160
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr17:3442847-3442645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
92, 153
               

               
Conread position:
               
11-241
               

               
Cow position:
               
chr17:42347400-42347170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr17:21628303-21628579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
95, 69
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr17:34595760-34596041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 128
               

               
Conread position:
               
11-352
               

               
Cow position:
               
chr17:30718598-30718255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
84, 171
               

               
Conread position:
               
11-354
               

               
Cow position:
               
chr17:5900199-5900534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
151, 53
               

               
Conread position:
               
11-390
               

               
Cow position:
               
chr17:25097283-25097655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr17:8837128-8836722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 264
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr17:11296456-11296868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 291
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr17:12108624-12109037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr17:22564004-22564407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr17:29472296-29472686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr17:32138579-32138187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr17:32419297-32418888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 188
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr17:33275925-33275530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
84, 71
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr17:40741468-40741883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr17:42419552-42419934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
12-138
               

               
Cow position:
               
chr17:8644859-8644990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
12-147
               

               
Cow position:
               
chr17:36533483-36533616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
12-183
               

               
Cow position:
               
chr17:29040643-29040469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 115
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr17:25590414-25590225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
12-197
               

               
Cow position:
               
chr17:20815196-20815382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
12-200
               

               
Cow position:
               
chr17:16307202-16307393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
91, 60
               

               
Conread position:
               
12-201
               

               
Cow position:
               
chr17:4824316-4824509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
12-206
               

               
Cow position:
               
chr17:33926303-33926105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr17:11171617-11171813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
12-218
               

               
Cow position:
               
chr17:33999222-33999014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
12-219
               

               
Cow position:
               
chr17:27162474-27162684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
150, 134
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr17:8279887-8279652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 190
               

               
Conread position:
               
12-244
               

               
Cow position:
               
chr17:18824612-18824848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
83, 180
               

               
Conread position:
               
12-251
               

               
Cow position:
               
chr17:242458-242702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
87, 196
               

               
Conread position:
               
12-251
               

               
Cow position:
               
chr17:21697554-21697795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 190
               

               
Conread position:
               
12-272
               

               
Cow position:
               
chr17:15333889-15333625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
12-273
               

               
Cow position:
               
chr17:41290196-41289936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr17:5006669-5006390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 240
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr17:20889196-20889471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr17:1020745-1020460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr17:11172793-11172514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
95, 50
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr17:19891437-19891725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr17:20215993-20216268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr17:24580478-24580193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr17:27142578-27142846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 155
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr17:28539859-28540129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr17:38200943-38200662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 185
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr17:41892246-41891960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
70, 110
               

               
Conread position:
               
12-365
               

               
Cow position:
               
chr17:8544128-8544479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
87, 180
               

               
Conread position:
               
12-405
               

               
Cow position:
               
chr17:19998957-19999334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 135
               

               
Conread position:
               
12-411
               

               
Cow position:
               
chr17:20848352-20848747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 59
               

               
Conread position:
               
12-415
               

               
Cow position:
               
chr17:11281284-11280862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
12-415
               

               
Cow position:
               
chr17:25608684-25608290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
62, 168
               

               
Conread position:
               
12-416
               

               
Cow position:
               
chr17:1063011-1063396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 58
               

               
Conread position:
               
12-416
               

               
Cow position:
               
chr17:24004216-24004601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 48
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr17:12289593-12289181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
91, 124
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr17:20033094-20032679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 189
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr17:20800638-20801043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr17:21599860-21599451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr17:25128527-25128125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr17:25611915-25612316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr17:25875234-25875624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
338, 73
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr17:40771652-40772059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
47, 190
               

               
Conread position:
               
13-150
               

               
Cow position:
               
chr17:16117605-16117460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
13-261
               

               
Cow position:
               
chr17:38363148-38362909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
147, 14
               

               
Conread position:
               
13-361
               

               
Cow position:
               
chr17:32273861-32273515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
13-415
               

               
Cow position:
               
chr17:12325923-12325543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr17:5280819-5280421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr17:18201597-18201990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr17:24149000-24149418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 202
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr17:25999939-26000348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
67, 242
               

               
Conread position:
               
13-418
               

               
Cow position:
               
chr17:28285205-28284806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
14-197
               

               
Cow position:
               
chr17:19756077-19755888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr17:21680592-21680794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
112, 71
               

               
Conread position:
               
14-227
               

               
Cow position:
               
chr17:15363738-15363522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
85, 194
               

               
Conread position:
               
14-235
               

               
Cow position:
               
chr17:35311245-35311475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 195
               

               
Conread position:
               
14-383
               

               
Cow position:
               
chr17:18495686-18495324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 26
               

               
Conread position:
               
14-388
               

               
Cow position:
               
chr17:18109262-18108886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 258
               

               
Conread position:
               
14-390
               

               
Cow position:
               
chr17:25189103-25189492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
58, 228
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr17:11397490-11397896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
69, 139
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr17:33288830-33288429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 112
               

               
Conread position:
               
14-418
               

               
Cow position:
               
chr17:30529712-30529317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
15-217
               

               
Cow position:
               
chr17:12278315-12278525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 199
               

               
Conread position:
               
15-225
               

               
Cow position:
               
chr17:26515911-26515695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 112
               

               
Conread position:
               
15-241
               

               
Cow position:
               
chr17:5255551-5255319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 185
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr17:21620539-21620771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 187
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr17:36268221-36268440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
96, 77
               

               
Conread position:
               
15-258
               

               
Cow position:
               
chr17:33403115-33402864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 191
               

               
Conread position:
               
15-280
               

               
Cow position:
               
chr17:2034370-2034622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
147, 40
               

               
Conread position:
               
15-347
               

               
Cow position:
               
chr17:12590988-12591334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 297
               

               
Conread position:
               
15-357
               

               
Cow position:
               
chr17:4225666-4225335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
15-414
               

               
Cow position:
               
chr17:39771221-39771628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 107
               

               
Conread position:
               
15-417
               

               
Cow position:
               
chr17:26514540-26514944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
68, 147
               

               
Conread position:
               
16-417
               

               
Cow position:
               
chr17:3467595-3467980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
17-237
               

               
Cow position:
               
chr17:26881510-26881283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
52, 216
               

               
Conread position:
               
17-240
               

               
Cow position:
               
chr17:44232892-44232659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 150
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr17:20990367-20990029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 155
               

               
Conread position:
               
18-237
               

               
Cow position:
               
chr17:32950100-32950325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 208
               

               
Conread position:
               
18-242
               

               
Cow position:
               
chr17:21495202-21495433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
18-411
               

               
Cow position:
               
chr17:1634654-1634270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
18-414
               

               
Cow position:
               
chr17:18419501-18419911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
19-362
               

               
Cow position:
               
chr17:15340908-15340577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
143, 46
               

               
Conread position:
               
19-415
               

               
Cow position:
               
chr17:20932158-20932556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 284
               

               
Conread position:
               
19-417
               

               
Cow position:
               
chr17:12447570-12447173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 43
               

               
Conread position:
               
21-288
               

               
Cow position:
               
chr17:22032863-22032594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
64, 174
               

               
Conread position:
               
22-288
               

               
Cow position:
               
chr17:21918042-21917772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
22-415
               

               
Cow position:
               
chr17:24883736-24883343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 97
               

               
Conread position:
               
23-144
               

               
Cow position:
               
chr17:21039108-21039235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
23-361
               

               
Cow position:
               
chr17:23246043-23246372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
64, 143
               

               
Conread position:
               
23-420
               

               
Cow position:
               
chr17:12306563-12306168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
24-257
               

               
Cow position:
               
chr17:10510828-10510587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
58, 188
               

               
Conread position:
               
24-417
               

               
Cow position:
               
chr17:17683064-17682685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 56
               

               
Conread position:
               
25-243
               

               
Cow position:
               
chr17:979318-979103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
25-420
               

               
Cow position:
               
chr17:20093292-20092897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
163, 61
               

               
Conread position:
               
26-417
               

               
Cow position:
               
chr17:4106150-4105763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
26-417
               

               
Cow position:
               
chr17:4121886-4121498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
28-258
               

               
Cow position:
               
chr17:21298062-21298303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
70, 208
               

               
Conread position:
               
28-417
               

               
Cow position:
               
chr17:1562936-1562562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 144
               

               
Conread position:
               
28-417
               

               
Cow position:
               
chr17:7142702-7143086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 137
               

               
Conread position:
               
28-417
               

               
Cow position:
               
chr17:27058715-27058320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
134, 167
               

               
Conread position:
               
29-214
               

               
Cow position:
               
chr17:6263747-6263936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 160
               

               
Conread position:
               
29-217
               

               
Cow position:
               
chr17:36499739-36499548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 177
               

               
Conread position:
               
29-227
               

               
Cow position:
               
chr17:10473667-10473874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 183
               

               
Conread position:
               
29-243
               

               
Cow position:
               
chr17:27463985-27464199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
84, 150
               

               
Conread position:
               
29-408
               

               
Cow position:
               
chr17:15188242-15187849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 287
               

               
Conread position:
               
30-417
               

               
Cow position:
               
chr17:26631976-26631578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
50, 138
               

               
Conread position:
               
31-416
               

               
Cow position:
               
chr17:28467977-28468352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
68, 111
               

               
Conread position:
               
31-417
               

               
Cow position:
               
chr17:13244190-13243825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
131, 40
               

               
Conread position:
               
32-286
               

               
Cow position:
               
chr17:14762277-14762023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 97
               

               
Conread position:
               
32-417
               

               
Cow position:
               
chr17:24559141-24559522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
33-237
               

               
Cow position:
               
chr17:31336-31547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 156
               

               
Conread position:
               
34-246
               

               
Cow position:
               
chr17:5382142-5381935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 60
               

               
Conread position:
               
35-417
               

               
Cow position:
               
chr17:4786651-4786252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr17:4967956-4968232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
49, 119
               

               
Conread position:
               
36-415
               

               
Cow position:
               
chr17:9966187-9965795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 157
               

               
Conread position:
               
36-417
               

               
Cow position:
               
chr17:5144322-5143943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
5, 272
               

               
Conread position:
               
36-417
               

               
Cow position:
               
chr17:31037534-31037148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 271
               

               
Conread position:
               
38-416
               

               
Cow position:
               
chr17:21414991-21414602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 174
               

               
Conread position:
               
38-416
               

               
Cow position:
               
chr17:21437474-21437085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 174
               

               
Conread position:
               
38-416
               

               
Cow position:
               
chr17:31701285-31701663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 157
               

               
Conread position:
               
39-417
               

               
Cow position:
               
chr17:18146031-18146419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
42-417
               

               
Cow position:
               
chr17:17410145-17410529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
42-417
               

               
Cow position:
               
chr17:25117742-25118116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
42-419
               

               
Cow position:
               
chr17:14003669-14004055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 270
               

               
Conread position:
               
43-405
               

               
Cow position:
               
chr17:6328961-6329329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 293
               

               
Conread position:
               
45-417
               

               
Cow position:
               
chr17:1040604-1040957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
49-415
               

               
Cow position:
               
chr17:24928338-24928705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
52-265
               

               
Cow position:
               
chr17:32009577-32009362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
56-409
               

               
Cow position:
               
chr17:14026054-14025686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 253
               

               
Conread position:
               
56-411
               

               
Cow position:
               
chr17:32280531-32280891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
28, 151
               

               
Conread position:
               
56-417
               

               
Cow position:
               
chr17:26233964-26233598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
24, 88
               

               
Conread position:
               
57-287
               

               
Cow position:
               
chr17:14060909-14060674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 169
               

               
Conread position:
               
62-414
               

               
Cow position:
               
chr17:1113757-1114124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 133
               

               
Conread position:
               
62-417
               

               
Cow position:
               
chr17:6318989-6318639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
64-242
               

               
Cow position:
               
chr17:24946975-24947154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
49, 130
               

               
Conread position:
               
64-417
               

               
Cow position:
               
chr17:9056826-9056470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 240
               

               
Conread position:
               
64-417
               

               
Cow position:
               
chr17:32348948-32349292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
64-419
               

               
Cow position:
               
chr17:20884397-20884756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
64-420
               

               
Cow position:
               
chr17:45296308-45296638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
65-416
               

               
Cow position:
               
chr17:10432102-10431736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
70-339
               

               
Cow position:
               
chr17:33658190-33657917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
33, 233
               

               
Conread position:
               
70-417
               

               
Cow position:
               
chr17:7803295-7802943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
75-288
               

               
Cow position:
               
chr17:25501995-25502211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 192
               

               
Conread position:
               
75-419
               

               
Cow position:
               
chr17:23563904-23563581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
24, 111
               

               
Conread position:
               
76-378
               

               
Cow position:
               
chr17:35339029-35338724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
79-412
               

               
Cow position:
               
chr17:40851872-40852192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
80-357
               

               
Cow position:
               
chr17:11832229-11831945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 101
               

               
Conread position:
               
81-416
               

               
Cow position:
               
chr17:37699465-37699113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 331
               

               
Conread position:
               
86-363
               

               
Cow position:
               
chr17:34751509-34751229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 128
               

               
Conread position:
               
88-238
               

               
Cow position:
               
chr17:32017979-32017825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
88-287
               

               
Cow position:
               
chr17:11368947-11368749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr17:23798179-23798382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
88-417
               

               
Cow position:
               
chr17:25616157-25616474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
11, 72
               

               
Conread position:
               
89-388
               

               
Cow position:
               
chr17:14652881-14652576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 239
               

               
Conread position:
               
90-417
               

               
Cow position:
               
chr17:35573663-35573976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
91-416
               

               
Cow position:
               
chr17:11912596-11912277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
94-417
               

               
Cow position:
               
chr17:21743842-21744165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
95-360
               

               
Cow position:
               
chr17:23517035-23516772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
67, 204
               

               
Conread position:
               
98-396
               

               
Cow position:
               
chr17:21489714-21489415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
98-417
               

               
Cow position:
               
chr17:25514213-25513889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 123
               

               
Conread position:
               
99-415
               

               
Cow position:
               
chr17:21325244-21325571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 77
               

               
Conread position:
               
100-417
               

               
Cow position:
               
chr17:25342828-25342511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
15, 106
               

               
Conread position:
               
103-288
               

               
Cow position:
               
chr17:21758223-21758040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
106-352
               

               
Cow position:
               
chr17:38263568-38263326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
107-416
               

               
Cow position:
               
chr17:22127846-22128151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
109-417
               

               
Cow position:
               
chr17:9824590-9824896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 96
               

               
Conread position:
               
110-349
               

               
Cow position:
               
chr17:40406366-40406606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 83
               

               
Conread position:
               
111-416
               

               
Cow position:
               
chr17:31856594-31856900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
51, 193
               

               
Conread position:
               
111-419
               

               
Cow position:
               
chr17:29025991-29026306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 99
               

               
Conread position:
               
113-411
               

               
Cow position:
               
chr17:36864556-36864846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
114-417
               

               
Cow position:
               
chr17:12511049-12510756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
115-288
               

               
Cow position:
               
chr17:21478995-21478821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 155
               

               
Conread position:
               
117-417
               

               
Cow position:
               
chr17:3153642-3153339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
118-417
               

               
Cow position:
               
chr17:36814290-36814594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
45, 209
               

               
Conread position:
               
120-409
               

               
Cow position:
               
chr17:40638882-40639168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
120-417
               

               
Cow position:
               
chr17:27730472-27730775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 185
               

               
Conread position:
               
121-420
               

               
Cow position:
               
chr17:39606362-39606654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
122-417
               

               
Cow position:
               
chr17:24750851-24751141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
123-416
               

               
Cow position:
               
chr17:1025885-1025606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
123-417
               

               
Cow position:
               
chr17:34791131-34790836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
125-418
               

               
Cow position:
               
chr17:26575291-26574992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
129-417
               

               
Cow position:
               
chr17:5372588-5372303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
136-417
               

               
Cow position:
               
chr17:21039512-21039785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
184, 26
               

               
Conread position:
               
136-417
               

               
Cow position:
               
chr17:22051644-22051362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
26, 123
               

               
Conread position:
               
136-420
               

               
Cow position:
               
chr17:18934205-18934488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
26, 136
               

               
Conread position:
               
141-362
               

               
Cow position:
               
chr17:22017134-22016916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 156
               

               
Conread position:
               
143-417
               

               
Cow position:
               
chr17:33155200-33154929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
144-417
               

               
Cow position:
               
chr17:35051563-35051849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
145-417
               

               
Cow position:
               
chr17:25800925-25800655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
146-417
               

               
Cow position:
               
chr17:8815149-8815416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
54, 170
               

               
Conread position:
               
150-417
               

               
Cow position:
               
chr17:17044371-17044106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 153
               

               
Conread position:
               
156-417
               

               
Cow position:
               
chr17:32333124-32332863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
6, 147
               

               
Conread position:
               
156-417
               

               
Cow position:
               
chr17:40412554-40412808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
6, 60
               

               
Conread position:
               
161-417
               

               
Cow position:
               
chr17:25511216-25511471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
161-417
               

               
Cow position:
               
chr17:29995464-29995206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
34, 140
               

               
Conread position:
               
164-407
               

               
Cow position:
               
chr17:12959082-12959321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
164-417
               

               
Cow position:
               
chr17:8948989-8948738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
165-417
               

               
Cow position:
               
chr17:33164839-33164591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
167-417
               

               
Cow position:
               
chr17:25473300-25473052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
153, 136
               

               
Conread position:
               
168-419
               

               
Cow position:
               
chr17:24163018-24163265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
172-417
               

               
Cow position:
               
chr17:3388809-3389063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
172-417
               

               
Cow position:
               
chr17:9932317-9932082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 128
               

               
Conread position:
               
175-417
               

               
Cow position:
               
chr17:37341053-37340802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
22, 174
               

               
Conread position:
               
178-417
               

               
Cow position:
               
chr17:7959170-7959408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 130
               

               
Conread position:
               
181-416
               

               
Cow position:
               
chr17:21466270-21466030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
183-411
               

               
Cow position:
               
chr17:21472185-21471964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
16, 112
               

               
Conread position:
               
189-416
               

               
Cow position:
               
chr17:17034953-17035174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
192-415
               

               
Cow position:
               
chr17:43315281-43315063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
128, 53
               

               
Conread position:
               
192-417
               

               
Cow position:
               
chr17:40276745-40276965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 76
               

               
Conread position:
               
192-417
               

               
Cow position:
               
chr17:42150396-42150617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
150, 107
               

               
Conread position:
               
215-417
               

               
Cow position:
               
chr17:946385-946585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 86
               

               
Conread position:
               
223-417
               

               
Cow position:
               
chr17:21718961-21718768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
97, 78
               

               
Conread position:
               
230-417
               

               
Cow position:
               
chr17:10016322-10016506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
233-417
               

               
Cow position:
               
chr17:21676936-21677120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
87, 66
               

               
Conread position:
               
246-420
               

               
Cow position:
               
chr17:20881750-20881583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
264-415
               

               
Cow position:
               
chr17:9260535-9260384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
318-417
               

               
Cow position:
               
chr17:20930435-20930532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               
Show alignments to all cow chromosomes.