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Cow genome map

           
Conread name:
           
Ss1.1-rpfco0128_b15.5
        

               
Conread position:
               
1-121
               

               
Cow position:
               
chr19:19490185-19490068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr19:19499795-19499633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 7
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr19:34911644-34911819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr19:3489256-3489472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 146
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr19:990654-990447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr19:42726113-42726361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 187
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr19:33882403-33882160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 184
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr19:35808359-35808132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
161, 7
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr19:1898475-1898227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 69
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr19:20693253-20693518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr19:15766969-15767229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr19:35380792-35380503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr19:42205691-42205975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr19:43418177-43418455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
111, 93
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr19:47109796-47110090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 225
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr19:15863281-15862943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr19:20622417-20622832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
112, 92
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr19:39576811-39576399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 302
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr19:30232488-30232886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
105, 154
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr19:39360897-39361329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr19:11191863-11191444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 265
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr19:25086296-25086686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr19:38340219-38339798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr19:39245657-39246086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr19:43034999-43035420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
11, 165
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr19:20935513-20935931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 61
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr19:17664398-17664827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 153
               

               
Conread position:
               
2-105
               

               
Cow position:
               
chr19:10972076-10971973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr19:7978801-7978579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 137
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr19:47727811-47727572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr19:22134385-22134146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
2-416
               

               
Cow position:
               
chr19:28924503-28924936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
69, 223
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr19:43058294-43058715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 208
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr19:46159820-46159978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr19:24956681-24956505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr19:19924843-19924592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 233
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr19:34000972-34001328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
7-417
               

               
Cow position:
               
chr19:24144782-24145198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 194
               

               
Conread position:
               
8-114
               

               
Cow position:
               
chr19:3858317-3858205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
8-234
               

               
Cow position:
               
chr19:37502901-37502684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
179, 77
               

               
Conread position:
               
8-287
               

               
Cow position:
               
chr19:34425354-34425627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
8-380
               

               
Cow position:
               
chr19:16566924-16567292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 125
               

               
Conread position:
               
8-409
               

               
Cow position:
               
chr19:11171453-11171046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
8-411
               

               
Cow position:
               
chr19:23832803-23832416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
189, 63
               

               
Conread position:
               
8-417
               

               
Cow position:
               
chr19:51621417-51621000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
99, 79
               

               
Conread position:
               
10-117
               

               
Cow position:
               
chr19:37633584-37633471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
10-128
               

               
Cow position:
               
chr19:38756066-38756184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
10-136
               

               
Cow position:
               
chr19:34654810-34654677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
10-147
               

               
Cow position:
               
chr19:46693921-46694058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 124
               

               
Conread position:
               
10-149
               

               
Cow position:
               
chr19:27104514-27104657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
10-159
               

               
Cow position:
               
chr19:20433010-20432856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
10-161
               

               
Cow position:
               
chr19:7492208-7492356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
10-167
               

               
Cow position:
               
chr19:54666889-54666725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
10-167
               

               
Cow position:
               
chr19:55210692-55210538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
10-183
               

               
Cow position:
               
chr19:51267663-51267839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
70, 51
               

               
Conread position:
               
10-187
               

               
Cow position:
               
chr19:30925550-30925373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 83
               

               
Conread position:
               
10-190
               

               
Cow position:
               
chr19:27348494-27348320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
152, 75
               

               
Conread position:
               
10-190
               

               
Cow position:
               
chr19:39794725-39794916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
10-195
               

               
Cow position:
               
chr19:54294815-54294632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
10-196
               

               
Cow position:
               
chr19:25696439-25696252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
73, 157
               

               
Conread position:
               
10-196
               

               
Cow position:
               
chr19:42664048-42663869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
10-199
               

               
Cow position:
               
chr19:52381300-52381490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 28
               

               
Conread position:
               
10-211
               

               
Cow position:
               
chr19:4537645-4537444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 58
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr19:46181046-46180842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
88, 153
               

               
Conread position:
               
10-217
               

               
Cow position:
               
chr19:25851720-25851502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
10-217
               

               
Cow position:
               
chr19:25852064-25851846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
10-217
               

               
Cow position:
               
chr19:25865156-25864938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
10-224
               

               
Cow position:
               
chr19:44125416-44125632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
10-227
               

               
Cow position:
               
chr19:19561274-19561504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
10-228
               

               
Cow position:
               
chr19:8212069-8211844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
10-229
               

               
Cow position:
               
chr19:31762792-31763017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
72, 203
               

               
Conread position:
               
10-231
               

               
Cow position:
               
chr19:32955652-32955879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr19:2138337-2138109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
89, 200
               

               
Conread position:
               
10-235
               

               
Cow position:
               
chr19:33306864-33307097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 201
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr19:41187567-41187807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 149
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr19:39697839-39698066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 146
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr19:13390688-13390917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
10-244
               

               
Cow position:
               
chr19:36176513-36176754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 84
               

               
Conread position:
               
10-244
               

               
Cow position:
               
chr19:46918609-46918855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
55, 196
               

               
Conread position:
               
10-246
               

               
Cow position:
               
chr19:10286676-10286903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
10-248
               

               
Cow position:
               
chr19:1580815-1580578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 177
               

               
Conread position:
               
10-251
               

               
Cow position:
               
chr19:1901233-1900988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 195
               

               
Conread position:
               
10-251
               

               
Cow position:
               
chr19:4340139-4339904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
96, 77
               

               
Conread position:
               
10-251
               

               
Cow position:
               
chr19:38596383-38596630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
63, 202
               

               
Conread position:
               
10-253
               

               
Cow position:
               
chr19:1504911-1505143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
152, 28
               

               
Conread position:
               
10-262
               

               
Cow position:
               
chr19:33932373-33932125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
150, 44
               

               
Conread position:
               
10-264
               

               
Cow position:
               
chr19:32450846-32451110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
63, 120
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr19:25999400-25999647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 62
               

               
Conread position:
               
10-266
               

               
Cow position:
               
chr19:3222568-3222832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 165
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr19:31825247-31824981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
10-280
               

               
Cow position:
               
chr19:373421-373151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
102, 38
               

               
Conread position:
               
10-280
               

               
Cow position:
               
chr19:35741926-35742203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 107
               

               
Conread position:
               
10-282
               

               
Cow position:
               
chr19:36722092-36722355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 117
               

               
Conread position:
               
10-285
               

               
Cow position:
               
chr19:30533709-30533976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
10-286
               

               
Cow position:
               
chr19:51185195-51185471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 107
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr19:4445852-4445573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 68
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr19:21363675-21363389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 152
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr19:31873885-31874169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr19:2734220-2734499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr19:12036736-12036457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 100
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr19:17479192-17478910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 50
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr19:18750312-18750026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
72, 194
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr19:31595067-31595350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
92, 135
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr19:33823085-33823368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 205
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr19:36125352-36125636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
72, 195
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr19:42240523-42240246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 199
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr19:43440931-43441217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 86
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr19:51401240-51400965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 132
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr19:53657667-53657941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
10-296
               

               
Cow position:
               
chr19:38638033-38637761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
10-333
               

               
Cow position:
               
chr19:20310862-20310545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 137
               

               
Conread position:
               
10-340
               

               
Cow position:
               
chr19:20671133-20670805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 194
               

               
Conread position:
               
10-346
               

               
Cow position:
               
chr19:35540073-35540406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
10-351
               

               
Cow position:
               
chr19:5656342-5656012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
120, 107
               

               
Conread position:
               
10-351
               

               
Cow position:
               
chr19:24669600-24669268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
10-352
               

               
Cow position:
               
chr19:18786557-18786209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 131
               

               
Conread position:
               
10-354
               

               
Cow position:
               
chr19:34620260-34619916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
10-355
               

               
Cow position:
               
chr19:9542129-9541787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 192
               

               
Conread position:
               
10-355
               

               
Cow position:
               
chr19:33468792-33469137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 157
               

               
Conread position:
               
10-356
               

               
Cow position:
               
chr19:19919693-19919347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr19:8332062-8332419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
10-358
               

               
Cow position:
               
chr19:31846774-31846434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr19:21065544-21065888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
152, 61
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr19:47118731-47118386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
72, 202
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr19:8033508-8033870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 207
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr19:21335848-21335472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
72, 175
               

               
Conread position:
               
10-363
               

               
Cow position:
               
chr19:17795664-17796020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
10-365
               

               
Cow position:
               
chr19:8375533-8375177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
10-378
               

               
Cow position:
               
chr19:386912-387275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
10-379
               

               
Cow position:
               
chr19:36845016-36845392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
100, 65
               

               
Conread position:
               
10-379
               

               
Cow position:
               
chr19:55930407-55930033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 135
               

               
Conread position:
               
10-384
               

               
Cow position:
               
chr19:23403876-23403497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr19:23785957-23786326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 264
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr19:32457410-32457794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 199
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr19:40051617-40051237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
10-401
               

               
Cow position:
               
chr19:27612400-27612017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 140
               

               
Conread position:
               
10-403
               

               
Cow position:
               
chr19:1664426-1664020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
10-406
               

               
Cow position:
               
chr19:55247394-55247795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
97, 165
               

               
Conread position:
               
10-408
               

               
Cow position:
               
chr19:14473010-14472610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 185
               

               
Conread position:
               
10-408
               

               
Cow position:
               
chr19:31378841-31378439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 188
               

               
Conread position:
               
10-408
               

               
Cow position:
               
chr19:33912865-33912458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 297
               

               
Conread position:
               
10-409
               

               
Cow position:
               
chr19:39057013-39057417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr19:15437877-15438276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
102, 71
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr19:34955929-34955542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 185
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr19:5185482-5185083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 190
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr19:6417367-6417783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr19:6688237-6687822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
72, 205
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr19:41023997-41024396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr19:41584743-41585147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 192
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr19:44839131-44838765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr19:27180491-27180064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
89, 138
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr19:28014248-28014658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr19:35018479-35018055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr19:43431553-43431146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 44
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:255023-254621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:268122-268525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:433359-432948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:729962-729571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
155, 27
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:1355381-1355783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
149, 77
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:1968536-1968144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 121
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:3812247-3811845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 157
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:5116099-5115715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:6531659-6532051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:7637468-7637058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:7668473-7668872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:8209621-8209229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 144
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:10080837-10081265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 151
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:10186268-10186684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:10755079-10755478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 133
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:11376637-11376244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 259
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:11758833-11758452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
92, 42
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:12747997-12747600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:13129650-13130041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:14253402-14253812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 179
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:15068225-15067832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 28
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:15887554-15887139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:16096784-16096376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 157
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:20661647-20661235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:24062065-24062451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:28451173-28451568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 135
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:33033678-33033267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 284
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:33747621-33748029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:36059700-36060131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 157
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:38392566-38392985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 256
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:38842787-38842380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
96, 143
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:39661776-39661361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
62, 130
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:39751249-39751648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 133
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:46454619-46455018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:47671519-47671911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:48722793-48723210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 197
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:53776810-53776392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
70, 132
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr19:55357823-55358217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 159
               

               
Conread position:
               
10-418
               

               
Cow position:
               
chr19:742409-741996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
70, 134
               

               
Conread position:
               
10-419
               

               
Cow position:
               
chr19:14347780-14348205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 239
               

               
Conread position:
               
10-419
               

               
Cow position:
               
chr19:23304726-23304310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
10-420
               

               
Cow position:
               
chr19:10213439-10213848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
11-123
               

               
Cow position:
               
chr19:39078097-39078208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
11-148
               

               
Cow position:
               
chr19:12019227-12019360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
11-175
               

               
Cow position:
               
chr19:51334437-51334612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
11-190
               

               
Cow position:
               
chr19:25572215-25572398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
11-195
               

               
Cow position:
               
chr19:23244751-23244564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr19:56382916-56383096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
11-198
               

               
Cow position:
               
chr19:53953875-53953701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
106, 66
               

               
Conread position:
               
11-237
               

               
Cow position:
               
chr19:10786590-10786370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 71
               

               
Conread position:
               
11-241
               

               
Cow position:
               
chr19:38907586-38907353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 74
               

               
Conread position:
               
11-244
               

               
Cow position:
               
chr19:10171770-10172010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 221
               

               
Conread position:
               
11-283
               

               
Cow position:
               
chr19:10232633-10232365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
11-287
               

               
Cow position:
               
chr19:30886162-30886444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 201
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr19:6610232-6609948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 176
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr19:7473468-7473747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
11-346
               

               
Cow position:
               
chr19:36245717-36245387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
69, 156
               

               
Conread position:
               
11-411
               

               
Cow position:
               
chr19:5913181-5912786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
11-411
               

               
Cow position:
               
chr19:22765386-22765783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 209
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr19:23005596-23005184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 183
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr19:24358455-24358085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr19:55590002-55590410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
71, 141
               

               
Conread position:
               
11-416
               

               
Cow position:
               
chr19:21198896-21199326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 302
               

               
Conread position:
               
11-416
               

               
Cow position:
               
chr19:21378696-21378290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
11-416
               

               
Cow position:
               
chr19:26086964-26087374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 198
               

               
Conread position:
               
11-416
               

               
Cow position:
               
chr19:32177941-32177533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 188
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr19:4587951-4587551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 152
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr19:7053564-7053169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
61, 131
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr19:50025658-50026063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 6
               

               
Conread position:
               
12-190
               

               
Cow position:
               
chr19:8839373-8839554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
12-190
               

               
Cow position:
               
chr19:48409285-48409462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
87, 56
               

               
Conread position:
               
12-199
               

               
Cow position:
               
chr19:36380015-36380205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 137
               

               
Conread position:
               
12-215
               

               
Cow position:
               
chr19:29627604-29627404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
131, 51
               

               
Conread position:
               
12-238
               

               
Cow position:
               
chr19:19673188-19673416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 48
               

               
Conread position:
               
12-239
               

               
Cow position:
               
chr19:35622135-35622358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
150, 61
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr19:2260355-2260126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr19:19661812-19662051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 131
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr19:44757836-44757615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
12-244
               

               
Cow position:
               
chr19:17273950-17273727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr19:35782363-35782129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 126
               

               
Conread position:
               
12-251
               

               
Cow position:
               
chr19:54182980-54182733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
74, 229
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr19:55724929-55724684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
12-261
               

               
Cow position:
               
chr19:47187282-47187033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 74
               

               
Conread position:
               
12-265
               

               
Cow position:
               
chr19:6049891-6049647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr19:6516030-6516315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
56, 240
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr19:8496531-8496248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 197
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr19:36461757-36461479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 118
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr19:53738105-53738384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 213
               

               
Conread position:
               
12-342
               

               
Cow position:
               
chr19:4502990-4503323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
144, 73
               

               
Conread position:
               
12-342
               

               
Cow position:
               
chr19:16694278-16693929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr19:14592820-14593171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 295
               

               
Conread position:
               
12-376
               

               
Cow position:
               
chr19:23222405-23222763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
67, 196
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr19:28554579-28554197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
12-392
               

               
Cow position:
               
chr19:10545938-10545554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
12-409
               

               
Cow position:
               
chr19:41945959-41946351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 79
               

               
Conread position:
               
12-411
               

               
Cow position:
               
chr19:39104241-39103842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 137
               

               
Conread position:
               
12-411
               

               
Cow position:
               
chr19:39623016-39622613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
150, 41
               

               
Conread position:
               
12-411
               

               
Cow position:
               
chr19:52278688-52278290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
12-411
               

               
Cow position:
               
chr19:52456991-52456583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 169
               

               
Conread position:
               
12-415
               

               
Cow position:
               
chr19:8128086-8128483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 153
               

               
Conread position:
               
12-415
               

               
Cow position:
               
chr19:43413551-43413954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 76
               

               
Conread position:
               
12-416
               

               
Cow position:
               
chr19:19804762-19804345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 153
               

               
Conread position:
               
12-416
               

               
Cow position:
               
chr19:50562454-50562859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
149, 49
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr19:3621199-3621606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 198
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr19:25053903-25053483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
103, 197
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr19:25727107-25726708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr19:30471567-30471180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr19:36221706-36222110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr19:53372126-53371717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
86, 124
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr19:53543110-53542711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr19:53791660-53791256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
70, 155
               

               
Conread position:
               
12-419
               

               
Cow position:
               
chr19:29368169-29368574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 157
               

               
Conread position:
               
12-419
               

               
Cow position:
               
chr19:29625674-29626079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 157
               

               
Conread position:
               
12-419
               

               
Cow position:
               
chr19:50161785-50162174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
251, 41
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr19:10706052-10706444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
52, 181
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr19:54942745-54943146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
13-183
               

               
Cow position:
               
chr19:53037383-53037208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 65
               

               
Conread position:
               
13-265
               

               
Cow position:
               
chr19:11565380-11565134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
13-283
               

               
Cow position:
               
chr19:44366798-44367067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
149, 84
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr19:35344707-35344977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 117
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr19:52773405-52773123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr19:12601583-12601979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr19:42694759-42695166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
63, 295
               

               
Conread position:
               
14-211
               

               
Cow position:
               
chr19:1713371-1713173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 162
               

               
Conread position:
               
14-226
               

               
Cow position:
               
chr19:31381225-31381006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
68, 152
               

               
Conread position:
               
14-241
               

               
Cow position:
               
chr19:53645643-53645423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 129
               

               
Conread position:
               
14-242
               

               
Cow position:
               
chr19:1152994-1153219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
92, 119
               

               
Conread position:
               
14-255
               

               
Cow position:
               
chr19:14993151-14992908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
14-283
               

               
Cow position:
               
chr19:37647067-37646792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 219
               

               
Conread position:
               
14-415
               

               
Cow position:
               
chr19:8864520-8864918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
5, 72
               

               
Conread position:
               
14-416
               

               
Cow position:
               
chr19:4252200-4251779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr19:13267411-13267029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr19:26976276-26975894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
15-172
               

               
Cow position:
               
chr19:56001089-56000925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
15-183
               

               
Cow position:
               
chr19:25835583-25835408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
15-221
               

               
Cow position:
               
chr19:12608124-12607918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
15-243
               

               
Cow position:
               
chr19:736694-736926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
65, 171
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr19:2349484-2349249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 195
               

               
Conread position:
               
15-287
               

               
Cow position:
               
chr19:22799310-22799029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
65, 171
               

               
Conread position:
               
15-288
               

               
Cow position:
               
chr19:12712107-12711826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 147
               

               
Conread position:
               
15-405
               

               
Cow position:
               
chr19:39777397-39776984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
15-408
               

               
Cow position:
               
chr19:22778976-22779381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
70, 325
               

               
Conread position:
               
15-416
               

               
Cow position:
               
chr19:11003857-11003451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 174
               

               
Conread position:
               
15-417
               

               
Cow position:
               
chr19:35762483-35762078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 164
               

               
Conread position:
               
15-420
               

               
Cow position:
               
chr19:44397273-44397687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
60, 305
               

               
Conread position:
               
16-264
               

               
Cow position:
               
chr19:56094314-56094565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
16-359
               

               
Cow position:
               
chr19:20984996-20984653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
16-411
               

               
Cow position:
               
chr19:10093070-10093480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
16-411
               

               
Cow position:
               
chr19:12698097-12698489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 141
               

               
Conread position:
               
17-173
               

               
Cow position:
               
chr19:7612400-7612555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
17-175
               

               
Cow position:
               
chr19:52136921-52136756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
17-244
               

               
Cow position:
               
chr19:18788329-18788099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 205
               

               
Conread position:
               
17-398
               

               
Cow position:
               
chr19:8793902-8793513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 68
               

               
Conread position:
               
18-288
               

               
Cow position:
               
chr19:3496399-3496124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
13, 154
               

               
Conread position:
               
18-357
               

               
Cow position:
               
chr19:51231044-51230708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
146, 37
               

               
Conread position:
               
18-392
               

               
Cow position:
               
chr19:44144133-44143787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
19-186
               

               
Cow position:
               
chr19:37423499-37423321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
19-187
               

               
Cow position:
               
chr19:25025715-25025546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
19-402
               

               
Cow position:
               
chr19:35846672-35847066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
61, 103
               

               
Conread position:
               
19-407
               

               
Cow position:
               
chr19:51751394-51750999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 77
               

               
Conread position:
               
19-417
               

               
Cow position:
               
chr19:33903645-33903249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
20-264
               

               
Cow position:
               
chr19:55967912-55967677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
21-405
               

               
Cow position:
               
chr19:35073661-35073273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
21-415
               

               
Cow position:
               
chr19:22039550-22039948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 151
               

               
Conread position:
               
21-417
               

               
Cow position:
               
chr19:7158954-7158538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
61, 219
               

               
Conread position:
               
22-242
               

               
Cow position:
               
chr19:29755127-29754904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
72, 163
               

               
Conread position:
               
22-411
               

               
Cow position:
               
chr19:6079579-6079179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
22-415
               

               
Cow position:
               
chr19:24137038-24137440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 171
               

               
Conread position:
               
23-356
               

               
Cow position:
               
chr19:13316631-13316306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 148
               

               
Conread position:
               
23-415
               

               
Cow position:
               
chr19:55688922-55688519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
23-417
               

               
Cow position:
               
chr19:16621574-16621181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
25-363
               

               
Cow position:
               
chr19:10242367-10242697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
25-417
               

               
Cow position:
               
chr19:23784618-23784249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
185, 61
               

               
Conread position:
               
25-417
               

               
Cow position:
               
chr19:42903802-42904169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
137, 49
               

               
Conread position:
               
26-288
               

               
Cow position:
               
chr19:8270823-8270551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 196
               

               
Conread position:
               
26-411
               

               
Cow position:
               
chr19:36097005-36097395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
57, 177
               

               
Conread position:
               
26-417
               

               
Cow position:
               
chr19:17972475-17972091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
27-415
               

               
Cow position:
               
chr19:9531029-9531425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
135, 35
               

               
Conread position:
               
27-416
               

               
Cow position:
               
chr19:3246261-3245879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
27-417
               

               
Cow position:
               
chr19:20686829-20687198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 106
               

               
Conread position:
               
27-417
               

               
Cow position:
               
chr19:22043558-22043180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
28-237
               

               
Cow position:
               
chr19:42746546-42746339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
28-417
               

               
Cow position:
               
chr19:34166150-34166545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
70, 136
               

               
Conread position:
               
29-151
               

               
Cow position:
               
chr19:48744753-48744629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
29-242
               

               
Cow position:
               
chr19:11232143-11231926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
29-288
               

               
Cow position:
               
chr19:33290269-33290533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 138
               

               
Conread position:
               
30-280
               

               
Cow position:
               
chr19:29477085-29477338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
71, 176
               

               
Conread position:
               
31-200
               

               
Cow position:
               
chr19:51327256-51327434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
31-417
               

               
Cow position:
               
chr19:48960179-48960570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 236
               

               
Conread position:
               
32-223
               

               
Cow position:
               
chr19:4576878-4576684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 75
               

               
Conread position:
               
32-390
               

               
Cow position:
               
chr19:25673729-25673374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
32-417
               

               
Cow position:
               
chr19:51285416-51285814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 258
               

               
Conread position:
               
33-417
               

               
Cow position:
               
chr19:25769452-25769851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 231
               

               
Conread position:
               
33-417
               

               
Cow position:
               
chr19:42563923-42564324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 281
               

               
Conread position:
               
35-202
               

               
Cow position:
               
chr19:6092558-6092734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
35-417
               

               
Cow position:
               
chr19:22450139-22449740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
36-379
               

               
Cow position:
               
chr19:16105268-16104944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
126, 45
               

               
Conread position:
               
38-287
               

               
Cow position:
               
chr19:35233854-35233604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
38-288
               

               
Cow position:
               
chr19:53840312-53840565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 154
               

               
Conread position:
               
39-417
               

               
Cow position:
               
chr19:25655441-25655067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 272
               

               
Conread position:
               
39-417
               

               
Cow position:
               
chr19:25855107-25854702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 309
               

               
Conread position:
               
40-244
               

               
Cow position:
               
chr19:38724052-38723840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
25, 187
               

               
Conread position:
               
40-277
               

               
Cow position:
               
chr19:33116391-33116635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
48-354
               

               
Cow position:
               
chr19:25628326-25628016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
48-417
               

               
Cow position:
               
chr19:24760078-24759710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
49-417
               

               
Cow position:
               
chr19:6601900-6601540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
52-288
               

               
Cow position:
               
chr19:6849395-6849146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 153
               

               
Conread position:
               
54-417
               

               
Cow position:
               
chr19:25526096-25526456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
55-237
               

               
Cow position:
               
chr19:15442579-15442760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 134
               

               
Conread position:
               
55-417
               

               
Cow position:
               
chr19:55394719-55395085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
42, 106
               

               
Conread position:
               
58-417
               

               
Cow position:
               
chr19:51306957-51307326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 112
               

               
Conread position:
               
63-242
               

               
Cow position:
               
chr19:56140819-56140999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
35, 144
               

               
Conread position:
               
65-380
               

               
Cow position:
               
chr19:47859492-47859171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 143
               

               
Conread position:
               
65-417
               

               
Cow position:
               
chr19:38111297-38111645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
68-417
               

               
Cow position:
               
chr19:11646400-11646741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
68-417
               

               
Cow position:
               
chr19:36138682-36139031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
69-417
               

               
Cow position:
               
chr19:38499997-38500333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
69-417
               

               
Cow position:
               
chr19:47453262-47453608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
73-417
               

               
Cow position:
               
chr19:35107360-35107693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
75-362
               

               
Cow position:
               
chr19:7404546-7404252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
75-408
               

               
Cow position:
               
chr19:34287858-34288181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
77-240
               

               
Cow position:
               
chr19:25807467-25807299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
77-415
               

               
Cow position:
               
chr19:41497795-41497467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
26, 106
               

               
Conread position:
               
78-417
               

               
Cow position:
               
chr19:52187331-52187661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr19:15719778-15719473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
81-416
               

               
Cow position:
               
chr19:21816801-21817142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
18, 191
               

               
Conread position:
               
81-417
               

               
Cow position:
               
chr19:11724678-11724342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 110
               

               
Conread position:
               
82-362
               

               
Cow position:
               
chr19:43203149-43202869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
85-407
               

               
Cow position:
               
chr19:54121122-54121432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
86-414
               

               
Cow position:
               
chr19:46094795-46094453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
16, 221
               

               
Conread position:
               
88-415
               

               
Cow position:
               
chr19:24005516-24005828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
226, 13
               

               
Conread position:
               
88-417
               

               
Cow position:
               
chr19:18129406-18129737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
89-415
               

               
Cow position:
               
chr19:15852795-15853101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
17, 75
               

               
Conread position:
               
92-417
               

               
Cow position:
               
chr19:49221757-49221445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
98-361
               

               
Cow position:
               
chr19:39485177-39485439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
64, 194
               

               
Conread position:
               
98-417
               

               
Cow position:
               
chr19:15092269-15091968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
98-417
               

               
Cow position:
               
chr19:52158393-52158719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
64, 200
               

               
Conread position:
               
100-417
               

               
Cow position:
               
chr19:8869439-8869752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
105-417
               

               
Cow position:
               
chr19:22992527-22992212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
105-418
               

               
Cow position:
               
chr19:23394650-23394963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 37
               

               
Conread position:
               
106-417
               

               
Cow position:
               
chr19:6334023-6334308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
208, 40
               

               
Conread position:
               
109-416
               

               
Cow position:
               
chr19:42517388-42517078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 195
               

               
Conread position:
               
110-417
               

               
Cow position:
               
chr19:23378557-23378854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
115-417
               

               
Cow position:
               
chr19:11110857-11110552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 155
               

               
Conread position:
               
116-383
               

               
Cow position:
               
chr19:39385156-39384897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
116-417
               

               
Cow position:
               
chr19:2221202-2220895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 189
               

               
Conread position:
               
121-414
               

               
Cow position:
               
chr19:10929322-10929620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
121-417
               

               
Cow position:
               
chr19:14632154-14631864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
41, 71
               

               
Conread position:
               
122-419
               

               
Cow position:
               
chr19:24453627-24453329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
123-417
               

               
Cow position:
               
chr19:26753922-26754215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
125-414
               

               
Cow position:
               
chr19:31652446-31652735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
130-417
               

               
Cow position:
               
chr19:19549658-19549378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 160
               

               
Conread position:
               
136-415
               

               
Cow position:
               
chr19:20666175-20665892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
139-287
               

               
Cow position:
               
chr19:25954839-25954690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
141-415
               

               
Cow position:
               
chr19:37467159-37466886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
141-417
               

               
Cow position:
               
chr19:48744366-48744092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
142-417
               

               
Cow position:
               
chr19:34758097-34757815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
144-417
               

               
Cow position:
               
chr19:55583432-55583713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
145-417
               

               
Cow position:
               
chr19:18054340-18054082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
145-417
               

               
Cow position:
               
chr19:40127261-40126988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
150-417
               

               
Cow position:
               
chr19:23889571-23889309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
150-417
               

               
Cow position:
               
chr19:33575433-33575696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
153-417
               

               
Cow position:
               
chr19:12052934-12052670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
153-417
               

               
Cow position:
               
chr19:12067657-12067921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
155-414
               

               
Cow position:
               
chr19:25763028-25763279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
156-417
               

               
Cow position:
               
chr19:4459525-4459265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 171
               

               
Conread position:
               
156-417
               

               
Cow position:
               
chr19:34420329-34420586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
161-416
               

               
Cow position:
               
chr19:13488583-13488330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
161-417
               

               
Cow position:
               
chr19:47185160-47184903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
163-417
               

               
Cow position:
               
chr19:7148141-7147879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
164-409
               

               
Cow position:
               
chr19:28447365-28447609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 96
               

               
Conread position:
               
164-416
               

               
Cow position:
               
chr19:11560118-11559859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
164-417
               

               
Cow position:
               
chr19:3498028-3497770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
164-417
               

               
Cow position:
               
chr19:42768174-42767926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 137
               

               
Conread position:
               
166-414
               

               
Cow position:
               
chr19:33913451-33913704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
172-418
               

               
Cow position:
               
chr19:33987997-33988247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
175-417
               

               
Cow position:
               
chr19:10238671-10238913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
177-417
               

               
Cow position:
               
chr19:37067076-37067310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
19, 123
               

               
Conread position:
               
180-417
               

               
Cow position:
               
chr19:6344011-6344259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
182-411
               

               
Cow position:
               
chr19:23087927-23088152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
132, 116
               

               
Conread position:
               
185-417
               

               
Cow position:
               
chr19:28810373-28810139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
190-419
               

               
Cow position:
               
chr19:39795141-39795368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
113, 135
               

               
Conread position:
               
192-417
               

               
Cow position:
               
chr19:10538597-10538381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
122, 10
               

               
Conread position:
               
194-417
               

               
Cow position:
               
chr19:23756787-23756574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
125, 104
               

               
Conread position:
               
196-415
               

               
Cow position:
               
chr19:34608240-34608024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
198-417
               

               
Cow position:
               
chr19:40002397-40002180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
102, 81
               

               
Conread position:
               
205-417
               

               
Cow position:
               
chr19:10930450-10930249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
115, 41
               

               
Conread position:
               
205-417
               

               
Cow position:
               
chr19:38732105-38732315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 96
               

               
Conread position:
               
208-417
               

               
Cow position:
               
chr19:34654641-34654433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
111, 60
               

               
Conread position:
               
217-417
               

               
Cow position:
               
chr19:24692986-24693181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
33, 39
               

               
Conread position:
               
220-417
               

               
Cow position:
               
chr19:12279711-12279903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
220-417
               

               
Cow position:
               
chr19:25832218-25832023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
220-417
               

               
Cow position:
               
chr19:39981717-39981916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
220-417
               

               
Cow position:
               
chr19:52728593-52728788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
226-416
               

               
Cow position:
               
chr19:19916433-19916247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
259-417
               

               
Cow position:
               
chr19:22871235-22871079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
263-415
               

               
Cow position:
               
chr19:4602670-4602521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 38
               
Show alignments to all cow chromosomes.