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Cow genome map

           
Conread name:
           
Ss1.1-rpfco0128_b15.5
        

               
Conread position:
               
1-154
               

               
Cow position:
               
chr21:24797526-24797676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr21:13163724-13163886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
97, 83
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr21:9998889-9998692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr21:393853-394065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 146
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr21:9710869-9710648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 88
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr21:41455116-41454890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr21:21480351-21480112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr21:5455154-5454914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr21:3236362-3236604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr21:39450334-39450083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
81, 7
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr21:12961070-12960819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 167
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr21:3047517-3047757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr21:2785945-2785678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr21:20044941-20044654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
10, 167
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr21:1058907-1059198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 229
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr21:4998653-4998371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
98, 205
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr21:15610985-15611264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 141
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr21:45355668-45355957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 179
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr21:23322252-23321885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 150
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:38692023-38692430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 79
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr21:22856048-22856460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
79, 143
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr21:41579581-41579998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
81, 171
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr21:9310877-9311306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr21:10263872-10264287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr21:24296930-24296513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
115, 7
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr21:27569329-27568907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr21:33997390-33996998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr21:44565867-44565477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
107, 50
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr21:44826050-44825623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 64
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr21:47861027-47861433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 166
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr21:7672964-7673368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr21:42190334-42190148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
111, 60
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr21:28989447-28989688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
75, 165
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr21:40786505-40786905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
78, 137
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr21:4080189-4080373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr21:17174980-17175225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
58, 186
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr21:10514642-10514931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr21:39401430-39401714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
96, 194
               

               
Conread position:
               
3-417
               

               
Cow position:
               
chr21:3763903-3763499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
3-417
               

               
Cow position:
               
chr21:40133993-40134398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
4-414
               

               
Cow position:
               
chr21:19083766-19083336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 198
               

               
Conread position:
               
7-145
               

               
Cow position:
               
chr21:43631363-43631219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
7-246
               

               
Cow position:
               
chr21:5137650-5137405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
95, 162
               

               
Conread position:
               
7-416
               

               
Cow position:
               
chr21:14760420-14760808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
114, 67
               

               
Conread position:
               
7-417
               

               
Cow position:
               
chr21:41974539-41974115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 231
               

               
Conread position:
               
7-417
               

               
Cow position:
               
chr21:45971318-45970927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
155, 66
               

               
Conread position:
               
8-168
               

               
Cow position:
               
chr21:18934763-18934923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
113, 67
               

               
Conread position:
               
8-170
               

               
Cow position:
               
chr21:34835583-34835428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
154, 14
               

               
Conread position:
               
8-201
               

               
Cow position:
               
chr21:18935598-18935797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
75, 154
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr21:2679393-2679669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 167
               

               
Conread position:
               
8-390
               

               
Cow position:
               
chr21:4905132-4904739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 212
               

               
Conread position:
               
8-415
               

               
Cow position:
               
chr21:41155701-41156121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
8-417
               

               
Cow position:
               
chr21:3585518-3585112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
8-417
               

               
Cow position:
               
chr21:6910043-6909637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
72, 205
               

               
Conread position:
               
8-417
               

               
Cow position:
               
chr21:28244316-28244719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
154, 60
               

               
Conread position:
               
8-417
               

               
Cow position:
               
chr21:32297670-32297256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 187
               

               
Conread position:
               
9-359
               

               
Cow position:
               
chr21:33263692-33264037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
9-390
               

               
Cow position:
               
chr21:17643131-17642764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr21:15545529-15545112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 192
               

               
Conread position:
               
9-417
               

               
Cow position:
               
chr21:11027515-11027106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
9-417
               

               
Cow position:
               
chr21:20160525-20160930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 109
               

               
Conread position:
               
9-420
               

               
Cow position:
               
chr21:46912383-46912804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
10-114
               

               
Cow position:
               
chr21:18713126-18713232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
10-116
               

               
Cow position:
               
chr21:46626921-46627026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
10-122
               

               
Cow position:
               
chr21:31278622-31278735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 75
               

               
Conread position:
               
10-129
               

               
Cow position:
               
chr21:28907801-28907683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 28
               

               
Conread position:
               
10-132
               

               
Cow position:
               
chr21:1510916-1511036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
10-138
               

               
Cow position:
               
chr21:35897325-35897455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
10-143
               

               
Cow position:
               
chr21:28029240-28029379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
10-152
               

               
Cow position:
               
chr21:26241667-26241815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
10-152
               

               
Cow position:
               
chr21:31159099-31159250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
10-158
               

               
Cow position:
               
chr21:28599614-28599769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
10-167
               

               
Cow position:
               
chr21:4268716-4268879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
10-169
               

               
Cow position:
               
chr21:17697018-17696858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
10-180
               

               
Cow position:
               
chr21:28512375-28512545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
152, 106
               

               
Conread position:
               
10-180
               

               
Cow position:
               
chr21:33419872-33419707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
10-189
               

               
Cow position:
               
chr21:7716948-7716760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
69, 163
               

               
Conread position:
               
10-190
               

               
Cow position:
               
chr21:34658877-34659060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
106, 81
               

               
Conread position:
               
10-190
               

               
Cow position:
               
chr21:48484601-48484421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
10-195
               

               
Cow position:
               
chr21:13303662-13303852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
89, 56
               

               
Conread position:
               
10-196
               

               
Cow position:
               
chr21:48108020-48107834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 155
               

               
Conread position:
               
10-200
               

               
Cow position:
               
chr21:33791525-33791329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
93, 57
               

               
Conread position:
               
10-203
               

               
Cow position:
               
chr21:5344498-5344697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
10-205
               

               
Cow position:
               
chr21:45375458-45375665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 112
               

               
Conread position:
               
10-211
               

               
Cow position:
               
chr21:37361625-37361430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
102, 60
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr21:48251187-48250977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 111
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr21:42023967-42024171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
152, 166
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr21:1464071-1464284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 155
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr21:4189677-4189891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 176
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr21:12616982-12617195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr21:7564479-7564259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr21:33729277-33729488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 66
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr21:45866779-45866992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
10-224
               

               
Cow position:
               
chr21:9872810-9873020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
152, 39
               

               
Conread position:
               
10-225
               

               
Cow position:
               
chr21:18494808-18495031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
10-227
               

               
Cow position:
               
chr21:31676341-31676562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
10-229
               

               
Cow position:
               
chr21:45850868-45850644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
10-233
               

               
Cow position:
               
chr21:47067046-47066828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr21:912124-911896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
10-235
               

               
Cow position:
               
chr21:17714156-17714389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 112
               

               
Conread position:
               
10-238
               

               
Cow position:
               
chr21:30990426-30990204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr21:35897783-35897563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr21:10151637-10151882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr21:13738411-13738637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr21:16612472-16612702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr21:18783841-18783611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
93, 108
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr21:46860259-46860041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr21:3381239-3381000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr21:3813640-3813405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 154
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr21:6102424-6102183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr21:8985392-8985630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
102, 81
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr21:18790713-18790484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr21:28617433-28617669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr21:47802417-47802181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
88, 156
               

               
Conread position:
               
10-243
               

               
Cow position:
               
chr21:21077173-21077405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
10-244
               

               
Cow position:
               
chr21:20925664-20925425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 217
               

               
Conread position:
               
10-244
               

               
Cow position:
               
chr21:28881985-28882218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
103, 58
               

               
Conread position:
               
10-244
               

               
Cow position:
               
chr21:42913903-42913663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
59, 110
               

               
Conread position:
               
10-248
               

               
Cow position:
               
chr21:7132620-7132394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 150
               

               
Conread position:
               
10-262
               

               
Cow position:
               
chr21:26829403-26829165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
160, 38
               

               
Conread position:
               
10-272
               

               
Cow position:
               
chr21:4795068-4795334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 109
               

               
Conread position:
               
10-280
               

               
Cow position:
               
chr21:23192675-23192393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
10-280
               

               
Cow position:
               
chr21:24607228-24607502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 162
               

               
Conread position:
               
10-280
               

               
Cow position:
               
chr21:43357418-43357140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr21:10118396-10118678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 191
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr21:23150177-23149902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr21:24130923-24131188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 132
               

               
Conread position:
               
10-285
               

               
Cow position:
               
chr21:36163120-36162838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
10-285
               

               
Cow position:
               
chr21:46143786-46144080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
10-286
               

               
Cow position:
               
chr21:10601526-10601253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
10-286
               

               
Cow position:
               
chr21:37345259-37344979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 202
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr21:3498341-3498616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr21:18845172-18844889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:395718-395991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
92, 57
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:725049-724761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 264
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:2367183-2367456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:4399642-4399927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:10000923-10001199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:13488362-13488651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:18065081-18064790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 158
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:18842395-18842113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:18850376-18850100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
152, 52
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:19363621-19363335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:28442587-28442856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 154
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:32454744-32455028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:34391128-34390851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:41597658-41597935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
74, 187
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr21:42384348-42384632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
72, 202
               

               
Conread position:
               
10-291
               

               
Cow position:
               
chr21:13409980-13409703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
109, 75
               

               
Conread position:
               
10-303
               

               
Cow position:
               
chr21:5636878-5636581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
10-329
               

               
Cow position:
               
chr21:36642750-36643069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
85, 80
               

               
Conread position:
               
10-333
               

               
Cow position:
               
chr21:38120950-38121270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 71
               

               
Conread position:
               
10-343
               

               
Cow position:
               
chr21:28626084-28626416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
10-345
               

               
Cow position:
               
chr21:33210041-33210369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 187
               

               
Conread position:
               
10-346
               

               
Cow position:
               
chr21:44671596-44671926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 135
               

               
Conread position:
               
10-351
               

               
Cow position:
               
chr21:28190871-28191217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
72, 142
               

               
Conread position:
               
10-356
               

               
Cow position:
               
chr21:45473914-45473567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 157
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr21:712777-713136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr21:5392700-5392344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 302
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr21:7582067-7581712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 195
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr21:18800686-18800341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
96, 154
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr21:18941986-18941641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr21:27624555-27624892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
10-360
               

               
Cow position:
               
chr21:42414260-42413900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 134
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr21:13365187-13365539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 60
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr21:29484826-29485173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr21:3818059-3818404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr21:12801904-12801549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 133
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr21:13128251-13127901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 108
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr21:33350585-33350937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 150
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr21:33562858-33563203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr21:36297321-36297690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 309
               

               
Conread position:
               
10-363
               

               
Cow position:
               
chr21:2927364-2927006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 251
               

               
Conread position:
               
10-364
               

               
Cow position:
               
chr21:30607245-30606897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
10-365
               

               
Cow position:
               
chr21:5153460-5153819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
89, 166
               

               
Conread position:
               
10-380
               

               
Cow position:
               
chr21:9990357-9990726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
10-383
               

               
Cow position:
               
chr21:21169652-21169275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
83, 75
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr21:9416085-9416475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 303
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr21:19258669-19259041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
70, 143
               

               
Conread position:
               
10-409
               

               
Cow position:
               
chr21:27521485-27521097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
10-409
               

               
Cow position:
               
chr21:31253379-31253777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
25, 189
               

               
Conread position:
               
10-409
               

               
Cow position:
               
chr21:42841750-42841341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr21:49700193-49699791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 172
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr21:33564-33983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
89, 80
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr21:802451-802073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr21:1483332-1483724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr21:13840165-13840578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr21:18568807-18568387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
73, 213
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr21:40899179-40899591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
70, 174
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr21:10114486-10114082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
96, 80
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr21:25344720-25345115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr21:27229952-27229552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr21:28027646-28028050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
67, 184
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr21:31691321-31691723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 266
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr21:36762896-36763313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
97, 38
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:81913-82311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 190
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:641427-641836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:4282025-4281631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 60
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:5426786-5427179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:5649749-5650150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:6051349-6051757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 166
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:6833895-6834302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:8618117-8618513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 187
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:11645126-11644714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:11740288-11739867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 135
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:13035205-13034783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:13048354-13047938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
89, 119
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:14464419-14464838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
72, 179
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:15445236-15444830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
73, 237
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:17183765-17184170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:17193917-17193496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
88, 305
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:20262491-20262095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:22194268-22193842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
107, 58
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:22718938-22718531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
73, 158
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:23535559-23535965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:23586719-23587124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
72, 300
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:23672586-23672997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:24858154-24858568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 151
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:27863677-27863267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 298
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:28734069-28733660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 109
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:29069486-29069071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 294
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:29214306-29213907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:30592461-30592062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 153
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:32559511-32559119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:33982966-33982562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 108
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:37479799-37480216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 157
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:37706564-37706160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:38449609-38449200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 83
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:38900617-38901015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:38918057-38918454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
89, 137
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:39403696-39403276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
76, 157
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:39888901-39888474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:41590714-41590314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 76
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:42500875-42501304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
72, 309
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:44114287-44113884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:44251983-44251589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
196, 62
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:46264019-46264443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:47465278-47464867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr21:47760618-47761023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
126, 75
               

               
Conread position:
               
10-418
               

               
Cow position:
               
chr21:15584567-15584170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
10-418
               

               
Cow position:
               
chr21:22860844-22861245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 62
               

               
Conread position:
               
10-419
               

               
Cow position:
               
chr21:30231859-30231442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 164
               

               
Conread position:
               
10-419
               

               
Cow position:
               
chr21:30849096-30848694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
10-419
               

               
Cow position:
               
chr21:32339894-32339491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
10-420
               

               
Cow position:
               
chr21:28211039-28211432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
66, 133
               

               
Conread position:
               
11-124
               

               
Cow position:
               
chr21:46132134-46132019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
11-147
               

               
Cow position:
               
chr21:14125889-14126030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
11-164
               

               
Cow position:
               
chr21:42465673-42465831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 153
               

               
Conread position:
               
11-176
               

               
Cow position:
               
chr21:23683394-23683560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
11-178
               

               
Cow position:
               
chr21:42348834-42348660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
11-186
               

               
Cow position:
               
chr21:31511137-31511308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
149, 24
               

               
Conread position:
               
11-197
               

               
Cow position:
               
chr21:11706908-11706712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
11-212
               

               
Cow position:
               
chr21:41957330-41957127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
11-286
               

               
Cow position:
               
chr21:10727124-10727399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 72
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr21:15911244-15911524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr21:42540376-42540098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr21:44515118-44515388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr21:45921215-45920934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
91, 196
               

               
Conread position:
               
11-347
               

               
Cow position:
               
chr21:25764478-25764820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
69, 154
               

               
Conread position:
               
11-362
               

               
Cow position:
               
chr21:36795447-36795803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
11-411
               

               
Cow position:
               
chr21:41620963-41621374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 299
               

               
Conread position:
               
11-414
               

               
Cow position:
               
chr21:3361171-3360767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 106
               

               
Conread position:
               
11-414
               

               
Cow position:
               
chr21:41198567-41198148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 305
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr21:5970994-5970594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr21:24598505-24598895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 151
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr21:39664545-39664146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
88, 134
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr21:40589639-40589228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
71, 111
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr21:45151779-45151373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
95, 161
               

               
Conread position:
               
11-418
               

               
Cow position:
               
chr21:28810419-28810022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
12-172
               

               
Cow position:
               
chr21:46829423-46829264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
12-179
               

               
Cow position:
               
chr21:42463996-42463819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
12-201
               

               
Cow position:
               
chr21:21223134-21223323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 148
               

               
Conread position:
               
12-202
               

               
Cow position:
               
chr21:36793737-36793931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
89, 103
               

               
Conread position:
               
12-216
               

               
Cow position:
               
chr21:16789566-16789775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 151
               

               
Conread position:
               
12-226
               

               
Cow position:
               
chr21:42053420-42053204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 79
               

               
Conread position:
               
12-231
               

               
Cow position:
               
chr21:28443533-28443306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
73, 164
               

               
Conread position:
               
12-235
               

               
Cow position:
               
chr21:42170475-42170704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 189
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr21:7067889-7068130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 202
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr21:24765128-24765360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 186
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr21:34565368-34565131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 125
               

               
Conread position:
               
12-244
               

               
Cow position:
               
chr21:28993781-28993536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr21:17616480-17616240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 136
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr21:30150421-30150182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 196
               

               
Conread position:
               
12-251
               

               
Cow position:
               
chr21:27743587-27743836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
12-266
               

               
Cow position:
               
chr21:11639865-11640123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr21:21769969-21770230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 199
               

               
Conread position:
               
12-269
               

               
Cow position:
               
chr21:32535821-32536082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
12-285
               

               
Cow position:
               
chr21:41878321-41878592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr21:34739691-34739967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 102
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr21:4098720-4098993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
126, 58
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr21:9028465-9028740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 202
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr21:18828465-18828178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr21:25536841-25537122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr21:28429294-28429568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
151, 94
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr21:31662305-31662591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 175
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr21:35997018-35997296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 219
               

               
Conread position:
               
12-289
               

               
Cow position:
               
chr21:1591393-1591679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr21:13489487-13489778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
12-320
               

               
Cow position:
               
chr21:24887853-24888157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
68, 110
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr21:10633796-10633443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
95, 265
               

               
Conread position:
               
12-373
               

               
Cow position:
               
chr21:19766699-19767065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 185
               

               
Conread position:
               
12-380
               

               
Cow position:
               
chr21:45330096-45329739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
12-384
               

               
Cow position:
               
chr21:8549522-8549902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
71, 246
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr21:47764268-47763892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
12-402
               

               
Cow position:
               
chr21:643178-643560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 81
               

               
Conread position:
               
12-414
               

               
Cow position:
               
chr21:7710010-7710410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr21:5898553-5898157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 73
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr21:29002317-29001894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 297
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr21:34653927-34654322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr21:46849278-46848881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 79
               

               
Conread position:
               
13-221
               

               
Cow position:
               
chr21:40058651-40058864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
13-270
               

               
Cow position:
               
chr21:10608609-10608345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr21:24642364-24642644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr21:28477467-28477753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 185
               

               
Conread position:
               
13-357
               

               
Cow position:
               
chr21:26244777-26245105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
307, 47
               

               
Conread position:
               
13-409
               

               
Cow position:
               
chr21:42135778-42135375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 296
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr21:9477004-9477416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 190
               

               
Conread position:
               
14-241
               

               
Cow position:
               
chr21:29942853-29943081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
85, 104
               

               
Conread position:
               
14-272
               

               
Cow position:
               
chr21:2904613-2904370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
175, 48
               

               
Conread position:
               
14-282
               

               
Cow position:
               
chr21:33727614-33727343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
14-288
               

               
Cow position:
               
chr21:23801275-23801004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
14-288
               

               
Cow position:
               
chr21:45330761-45330483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
69, 208
               

               
Conread position:
               
14-408
               

               
Cow position:
               
chr21:19196320-19195918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 186
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr21:29979909-29979520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr21:34010544-34010144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr21:37299314-37299712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
14-420
               

               
Cow position:
               
chr21:27146145-27145730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
71, 174
               

               
Conread position:
               
15-187
               

               
Cow position:
               
chr21:32237145-32237318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
97, 76
               

               
Conread position:
               
15-209
               

               
Cow position:
               
chr21:41033129-41033324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 117
               

               
Conread position:
               
15-218
               

               
Cow position:
               
chr21:9212443-9212649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 148
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr21:10882282-10882506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 203
               

               
Conread position:
               
15-228
               

               
Cow position:
               
chr21:21216293-21216077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
15-241
               

               
Cow position:
               
chr21:48176674-48176901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
71, 89
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr21:13898036-13898266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
15-244
               

               
Cow position:
               
chr21:16909906-16910141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 185
               

               
Conread position:
               
15-285
               

               
Cow position:
               
chr21:13316231-13316507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
75, 70
               

               
Conread position:
               
15-416
               

               
Cow position:
               
chr21:11456962-11456554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
15-417
               

               
Cow position:
               
chr21:23606522-23606919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 143
               

               
Conread position:
               
16-222
               

               
Cow position:
               
chr21:10823402-10823623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 205
               

               
Conread position:
               
16-239
               

               
Cow position:
               
chr21:46607735-46607512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
16-244
               

               
Cow position:
               
chr21:49662268-49662041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
16-280
               

               
Cow position:
               
chr21:24222689-24222421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr21:6764853-6764616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
17-418
               

               
Cow position:
               
chr21:17455234-17455635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 229
               

               
Conread position:
               
17-419
               

               
Cow position:
               
chr21:8351455-8351040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
18-419
               

               
Cow position:
               
chr21:6713674-6713270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr21:35569521-35569285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
19-417
               

               
Cow position:
               
chr21:23822019-23822404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
80, 176
               

               
Conread position:
               
20-235
               

               
Cow position:
               
chr21:14515700-14515926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
21-273
               

               
Cow position:
               
chr21:18041989-18041737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
21-285
               

               
Cow position:
               
chr21:16187952-16187686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
21-417
               

               
Cow position:
               
chr21:10005032-10004631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
22-242
               

               
Cow position:
               
chr21:26648151-26647930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 7
               

               
Conread position:
               
22-288
               

               
Cow position:
               
chr21:19673669-19673930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
100, 53
               

               
Conread position:
               
22-417
               

               
Cow position:
               
chr21:957521-957921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 123
               

               
Conread position:
               
23-228
               

               
Cow position:
               
chr21:8235689-8235491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
141, 67
               

               
Conread position:
               
23-333
               

               
Cow position:
               
chr21:35354393-35354702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
23-414
               

               
Cow position:
               
chr21:7825320-7824941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
24-378
               

               
Cow position:
               
chr21:42007603-42007246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
25-417
               

               
Cow position:
               
chr21:23311090-23310702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 138
               

               
Conread position:
               
25-417
               

               
Cow position:
               
chr21:23568071-23568477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 164
               

               
Conread position:
               
26-241
               

               
Cow position:
               
chr21:603522-603312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 99
               

               
Conread position:
               
26-417
               

               
Cow position:
               
chr21:9301067-9301477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 293
               

               
Conread position:
               
26-417
               

               
Cow position:
               
chr21:23980328-23979927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 188
               

               
Conread position:
               
26-418
               

               
Cow position:
               
chr21:29978903-29978512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
46, 6
               

               
Conread position:
               
27-417
               

               
Cow position:
               
chr21:17637758-17638147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 117
               

               
Conread position:
               
27-417
               

               
Cow position:
               
chr21:48234299-48233924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
76, 135
               

               
Conread position:
               
28-409
               

               
Cow position:
               
chr21:937899-938265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
29-218
               

               
Cow position:
               
chr21:30680628-30680819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 102
               

               
Conread position:
               
29-241
               

               
Cow position:
               
chr21:46037374-46037159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 177
               

               
Conread position:
               
29-283
               

               
Cow position:
               
chr21:11359899-11360155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 135
               

               
Conread position:
               
29-363
               

               
Cow position:
               
chr21:28923978-28924307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
84, 108
               

               
Conread position:
               
29-417
               

               
Cow position:
               
chr21:12462109-12461717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 322
               

               
Conread position:
               
29-417
               

               
Cow position:
               
chr21:18318588-18318965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
134, 57
               

               
Conread position:
               
30-272
               

               
Cow position:
               
chr21:44733299-44733065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
132, 55
               

               
Conread position:
               
30-417
               

               
Cow position:
               
chr21:20152810-20153209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 288
               

               
Conread position:
               
31-345
               

               
Cow position:
               
chr21:12723020-12723332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 114
               

               
Conread position:
               
31-417
               

               
Cow position:
               
chr21:17875332-17874938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
55, 187
               

               
Conread position:
               
32-288
               

               
Cow position:
               
chr21:20418825-20418558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
32-300
               

               
Cow position:
               
chr21:17856408-17856681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
53, 86
               

               
Conread position:
               
32-417
               

               
Cow position:
               
chr21:20260456-20260045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
38-206
               

               
Cow position:
               
chr21:22353364-22353193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 129
               

               
Conread position:
               
38-287
               

               
Cow position:
               
chr21:17428369-17428619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
38-416
               

               
Cow position:
               
chr21:34151451-34151827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 234
               

               
Conread position:
               
39-285
               

               
Cow position:
               
chr21:20192774-20193015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
40-417
               

               
Cow position:
               
chr21:46911-47299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
41-415
               

               
Cow position:
               
chr21:27810278-27810642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 157
               

               
Conread position:
               
42-180
               

               
Cow position:
               
chr21:949794-949659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 42
               

               
Conread position:
               
42-416
               

               
Cow position:
               
chr21:14452111-14452484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 121
               

               
Conread position:
               
44-284
               

               
Cow position:
               
chr21:46552224-46551983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 43
               

               
Conread position:
               
44-417
               

               
Cow position:
               
chr21:30222218-30222594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 107
               

               
Conread position:
               
48-417
               

               
Cow position:
               
chr21:18155693-18155312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
38, 253
               

               
Conread position:
               
49-286
               

               
Cow position:
               
chr21:18414932-18415174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 205
               

               
Conread position:
               
50-236
               

               
Cow position:
               
chr21:4568168-4568357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
56-222
               

               
Cow position:
               
chr21:21143786-21143959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
59-287
               

               
Cow position:
               
chr21:10673023-10673244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
103, 57
               

               
Conread position:
               
63-417
               

               
Cow position:
               
chr21:30835260-30835618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
64-414
               

               
Cow position:
               
chr21:10561687-10561336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 263
               

               
Conread position:
               
64-417
               

               
Cow position:
               
chr21:20032943-20032580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
65-415
               

               
Cow position:
               
chr21:16914669-16915031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
67-415
               

               
Cow position:
               
chr21:37790102-37789752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 215
               

               
Conread position:
               
69-417
               

               
Cow position:
               
chr21:12916522-12916166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 140
               

               
Conread position:
               
73-414
               

               
Cow position:
               
chr21:44658488-44658810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
75-386
               

               
Cow position:
               
chr21:4280759-4280454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
75-416
               

               
Cow position:
               
chr21:6997846-6998192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 133
               

               
Conread position:
               
75-417
               

               
Cow position:
               
chr21:45906713-45906369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 133
               

               
Conread position:
               
77-417
               

               
Cow position:
               
chr21:37014493-37014173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
81-417
               

               
Cow position:
               
chr21:22210330-22209991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
91-243
               

               
Cow position:
               
chr21:33360110-33359955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
91-346
               

               
Cow position:
               
chr21:45262886-45262628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
53, 75
               

               
Conread position:
               
95-417
               

               
Cow position:
               
chr21:16569831-16570141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 95
               

               
Conread position:
               
95-417
               

               
Cow position:
               
chr21:37640485-37640818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
23, 111
               

               
Conread position:
               
97-417
               

               
Cow position:
               
chr21:15544286-15543987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 103
               

               
Conread position:
               
98-417
               

               
Cow position:
               
chr21:1511224-1511538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 168
               

               
Conread position:
               
98-417
               

               
Cow position:
               
chr21:44214057-44214363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
64, 171
               

               
Conread position:
               
100-417
               

               
Cow position:
               
chr21:16152373-16152692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 5
               

               
Conread position:
               
100-417
               

               
Cow position:
               
chr21:40266056-40266376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
100-417
               

               
Cow position:
               
chr21:41140783-41140463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
103-417
               

               
Cow position:
               
chr21:8426379-8426695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 108
               

               
Conread position:
               
105-417
               

               
Cow position:
               
chr21:18060017-18059707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
105-417
               

               
Cow position:
               
chr21:28919583-28919279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
106-287
               

               
Cow position:
               
chr21:297694-297877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
106-411
               

               
Cow position:
               
chr21:47719358-47719058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
107-248
               

               
Cow position:
               
chr21:35899786-35899928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
107-417
               

               
Cow position:
               
chr21:12339581-12339869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
107-417
               

               
Cow position:
               
chr21:13656687-13656382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
184, 48
               

               
Conread position:
               
108-417
               

               
Cow position:
               
chr21:868982-868667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
55, 195
               

               
Conread position:
               
108-417
               

               
Cow position:
               
chr21:8349271-8349574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 152
               

               
Conread position:
               
111-244
               

               
Cow position:
               
chr21:41598064-41598200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
111-416
               

               
Cow position:
               
chr21:22014133-22014442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
111-417
               

               
Cow position:
               
chr21:17890249-17890555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
111-419
               

               
Cow position:
               
chr21:47714057-47713753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
115-416
               

               
Cow position:
               
chr21:41522457-41522162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
52, 84
               

               
Conread position:
               
116-417
               

               
Cow position:
               
chr21:19060136-19059839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
122-417
               

               
Cow position:
               
chr21:742245-742526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
125-410
               

               
Cow position:
               
chr21:45835442-45835145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 84
               

               
Conread position:
               
128-417
               

               
Cow position:
               
chr21:10657139-10656849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
136-417
               

               
Cow position:
               
chr21:14126259-14126524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
142-417
               

               
Cow position:
               
chr21:71563-71838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 116
               

               
Conread position:
               
148-408
               

               
Cow position:
               
chr21:829227-828967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
150-417
               

               
Cow position:
               
chr21:44724380-44724124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
155-357
               

               
Cow position:
               
chr21:30980588-30980387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
7, 114
               

               
Conread position:
               
161-416
               

               
Cow position:
               
chr21:19240880-19240627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
34, 140
               

               
Conread position:
               
161-417
               

               
Cow position:
               
chr21:7169683-7169939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
164-417
               

               
Cow position:
               
chr21:8431102-8430845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
37, 163
               

               
Conread position:
               
164-417
               

               
Cow position:
               
chr21:46599359-46599610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 136
               

               
Conread position:
               
167-417
               

               
Cow position:
               
chr21:12104367-12104605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
41, 136
               

               
Conread position:
               
174-361
               

               
Cow position:
               
chr21:19360167-19359981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
22, 124
               

               
Conread position:
               
175-361
               

               
Cow position:
               
chr21:36682332-36682520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 127
               

               
Conread position:
               
183-418
               

               
Cow position:
               
chr21:8713942-8713704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
186-417
               

               
Cow position:
               
chr21:21615805-21616028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
187-417
               

               
Cow position:
               
chr21:6851195-6851417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
188-417
               

               
Cow position:
               
chr21:17252952-17252725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
193-417
               

               
Cow position:
               
chr21:22850951-22851167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
194-415
               

               
Cow position:
               
chr21:16498550-16498765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
200-417
               

               
Cow position:
               
chr21:39393784-39394001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
114, 98
               

               
Conread position:
               
206-415
               

               
Cow position:
               
chr21:24875394-24875602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 94
               

               
Conread position:
               
216-415
               

               
Cow position:
               
chr21:40820801-40820601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 85
               

               
Conread position:
               
217-417
               

               
Cow position:
               
chr21:11182606-11182801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 84
               

               
Conread position:
               
217-417
               

               
Cow position:
               
chr21:25012135-25012330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
224-417
               

               
Cow position:
               
chr21:8506486-8506295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
224-417
               

               
Cow position:
               
chr21:8509374-8509183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
96, 79
               

               
Conread position:
               
259-417
               

               
Cow position:
               
chr21:44732948-44732791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 9
               
Show alignments to all cow chromosomes.