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Cow genome map

           
Conread name:
           
Ss1.1-rpfco0128_b15.5
        

               
Conread position:
               
1-152
               

               
Cow position:
               
chr22:12897971-12898127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr22:36761395-36761575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr22:44386634-44386457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr22:19376477-19376663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr22:27581211-27581406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr22:33949237-33949023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr22:21407971-21408193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 174
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr22:2148338-2148625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr22:9520913-9521201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 132
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr22:34398690-34398399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
11, 72
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr22:34712479-34712783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr22:3316894-3317251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr22:864753-864351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 251
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr22:9127169-9127588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 224
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr22:28058278-28057860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr22:8324011-8324431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 147
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr22:5016277-5016675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr22:6092877-6092478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr22:6600921-6600490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 197
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr22:6610589-6610173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr22:6710011-6709605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr22:9372285-9372711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr22:10685321-10684913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 177
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr22:15568252-15567837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 126
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr22:25222138-25221718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 284
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr22:27825603-27826032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 191
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr22:36632997-36633385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr22:19340963-19341380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
13, 196
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr22:36569774-36569540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr22:4017242-4017602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 207
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr22:17764146-17764505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr22:18838016-18838433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr22:7967465-7967881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 261
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr22:11613189-11613611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr22:26106830-26107055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
96, 5
               

               
Conread position:
               
3-417
               

               
Cow position:
               
chr22:8733554-8733161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
3-417
               

               
Cow position:
               
chr22:23181267-23180861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
92, 112
               

               
Conread position:
               
3-417
               

               
Cow position:
               
chr22:24584272-24583887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr22:16235879-16235702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr22:27550124-27550368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr22:17814000-17814363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
4-417
               

               
Cow position:
               
chr22:6622474-6622066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
7-247
               

               
Cow position:
               
chr22:19787907-19787661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
7-415
               

               
Cow position:
               
chr22:33448302-33447895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
7-417
               

               
Cow position:
               
chr22:25237368-25236944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
72, 89
               

               
Conread position:
               
7-417
               

               
Cow position:
               
chr22:28356808-28357212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 175
               

               
Conread position:
               
8-220
               

               
Cow position:
               
chr22:1342512-1342727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
8-248
               

               
Cow position:
               
chr22:33415248-33415004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
8-252
               

               
Cow position:
               
chr22:13950946-13951201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
8-280
               

               
Cow position:
               
chr22:226669-226405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
8-288
               

               
Cow position:
               
chr22:13300183-13300468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
63, 163
               

               
Conread position:
               
8-416
               

               
Cow position:
               
chr22:59380-59797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
72, 252
               

               
Conread position:
               
8-417
               

               
Cow position:
               
chr22:1326192-1326603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
8-417
               

               
Cow position:
               
chr22:15153781-15154187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
110, 63
               

               
Conread position:
               
8-419
               

               
Cow position:
               
chr22:36560887-36560463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
72, 178
               

               
Conread position:
               
9-417
               

               
Cow position:
               
chr22:5616074-5616481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 194
               

               
Conread position:
               
9-417
               

               
Cow position:
               
chr22:26166840-26166433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
10-123
               

               
Cow position:
               
chr22:898532-898652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
10-129
               

               
Cow position:
               
chr22:28120567-28120692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
72, 121
               

               
Conread position:
               
10-137
               

               
Cow position:
               
chr22:4138331-4138197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
10-137
               

               
Cow position:
               
chr22:13889692-13889819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
10-137
               

               
Cow position:
               
chr22:34618509-34618637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 78
               

               
Conread position:
               
10-145
               

               
Cow position:
               
chr22:13720749-13720610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
10-145
               

               
Cow position:
               
chr22:28289861-28289996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-147
               

               
Cow position:
               
chr22:22013496-22013635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
10-147
               

               
Cow position:
               
chr22:33985990-33985847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
10-147
               

               
Cow position:
               
chr22:41980306-41980163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
10-150
               

               
Cow position:
               
chr22:8357390-8357532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
10-155
               

               
Cow position:
               
chr22:23249937-23249784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
10-160
               

               
Cow position:
               
chr22:15292920-15292772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
10-161
               

               
Cow position:
               
chr22:41137091-41137246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
10-162
               

               
Cow position:
               
chr22:11489319-11489463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
10-163
               

               
Cow position:
               
chr22:45106142-45105985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
89, 135
               

               
Conread position:
               
10-166
               

               
Cow position:
               
chr22:34930972-34930809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
10-170
               

               
Cow position:
               
chr22:21526816-21526653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
10-174
               

               
Cow position:
               
chr22:27700989-27701156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
10-179
               

               
Cow position:
               
chr22:11987441-11987266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
10-179
               

               
Cow position:
               
chr22:38107472-38107647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
89, 157
               

               
Conread position:
               
10-182
               

               
Cow position:
               
chr22:31194849-31195028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
10-185
               

               
Cow position:
               
chr22:21905270-21905449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
94, 75
               

               
Conread position:
               
10-190
               

               
Cow position:
               
chr22:1991265-1991435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
94, 50
               

               
Conread position:
               
10-195
               

               
Cow position:
               
chr22:10323682-10323865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
10-195
               

               
Cow position:
               
chr22:15919859-15919665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
10-196
               

               
Cow position:
               
chr22:13242212-13242406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
10-201
               

               
Cow position:
               
chr22:30472822-30473018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
10-202
               

               
Cow position:
               
chr22:19848620-19848423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
10-206
               

               
Cow position:
               
chr22:11211823-11211622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 158
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr22:30689407-30689614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
72, 157
               

               
Conread position:
               
10-214
               

               
Cow position:
               
chr22:14602619-14602413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr22:1791764-1791979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
65, 207
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr22:8063550-8063331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr22:32952254-32952468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 65
               

               
Conread position:
               
10-227
               

               
Cow position:
               
chr22:1822099-1821875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
10-227
               

               
Cow position:
               
chr22:45685257-45685024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
10-228
               

               
Cow position:
               
chr22:20687069-20687299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 208
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr22:9734631-9734858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
10-237
               

               
Cow position:
               
chr22:34606366-34606589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
10-237
               

               
Cow position:
               
chr22:38980680-38980901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
10-239
               

               
Cow position:
               
chr22:14816649-14816423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 154
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr22:45271357-45271592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr22:18654277-18654033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 153
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr22:30712527-30712770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 201
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr22:34597706-34597944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr22:36539897-36539653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
72, 223
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr22:6123120-6122893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr22:6360712-6360475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr22:10585925-10585692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
89, 104
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr22:22146002-22146244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr22:43292125-43291886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 192
               

               
Conread position:
               
10-244
               

               
Cow position:
               
chr22:12777807-12777578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
10-245
               

               
Cow position:
               
chr22:23403865-23403632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
10-248
               

               
Cow position:
               
chr22:39494427-39494180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
10-251
               

               
Cow position:
               
chr22:2702004-2702251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
73, 195
               

               
Conread position:
               
10-253
               

               
Cow position:
               
chr22:23865237-23865492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
10-257
               

               
Cow position:
               
chr22:47582682-47582925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr22:27291878-27292125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
10-272
               

               
Cow position:
               
chr22:295161-294892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 186
               

               
Conread position:
               
10-277
               

               
Cow position:
               
chr22:8283757-8284027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
10-277
               

               
Cow position:
               
chr22:25629995-25629717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 190
               

               
Conread position:
               
10-281
               

               
Cow position:
               
chr22:13011501-13011218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr22:1640533-1640248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 208
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr22:8116306-8116032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr22:15090516-15090798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 199
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr22:18126959-18126678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:845678-845960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 129
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:911878-912155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:1279610-1279328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:3993386-3993667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 183
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:7153666-7153938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 100
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:7838381-7838647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
152, 67
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:7851735-7852021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
72, 157
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:13861364-13861637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:14882335-14882059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:15398802-15398520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
94, 207
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:16812387-16812107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
97, 130
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:17993254-17992974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:19775650-19775375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
182, 81
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:22155376-22155662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 126
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:22222968-22223244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:25943257-25943532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:27329108-27328837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:34476225-34475943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:41245024-41245312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr22:44180369-44180650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
89, 75
               

               
Conread position:
               
10-289
               

               
Cow position:
               
chr22:26097838-26097562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 48
               

               
Conread position:
               
10-332
               

               
Cow position:
               
chr22:21355369-21355040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 187
               

               
Conread position:
               
10-335
               

               
Cow position:
               
chr22:31593085-31592752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
10-341
               

               
Cow position:
               
chr22:26141048-26141384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 245
               

               
Conread position:
               
10-352
               

               
Cow position:
               
chr22:21502511-21502863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 304
               

               
Conread position:
               
10-355
               

               
Cow position:
               
chr22:10920088-10919733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
66, 306
               

               
Conread position:
               
10-356
               

               
Cow position:
               
chr22:2216600-2216933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
10-356
               

               
Cow position:
               
chr22:12968294-12967945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 50
               

               
Conread position:
               
10-356
               

               
Cow position:
               
chr22:34750453-34750798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
76, 166
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr22:35753530-35753179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr22:21295949-21295595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr22:23176674-23176312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
26, 184
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr22:1609980-1609643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr22:28665045-28665415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
67, 208
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr22:34726448-34726794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
93, 128
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr22:43119953-43119600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 185
               

               
Conread position:
               
10-365
               

               
Cow position:
               
chr22:1590796-1591155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr22:17295155-17294802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 108
               

               
Conread position:
               
10-369
               

               
Cow position:
               
chr22:2623739-2623384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
10-371
               

               
Cow position:
               
chr22:28351880-28351529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
10-380
               

               
Cow position:
               
chr22:15039409-15039036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr22:3842403-3842784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
152, 73
               

               
Conread position:
               
10-392
               

               
Cow position:
               
chr22:4119792-4119403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
10-402
               

               
Cow position:
               
chr22:34894748-34895129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
92, 75
               

               
Conread position:
               
10-404
               

               
Cow position:
               
chr22:29290361-29289977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 137
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr22:29013653-29014057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
89, 221
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr22:38930738-38930331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
70, 251
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr22:47555620-47556026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
10-408
               

               
Cow position:
               
chr22:30515028-30515446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 202
               

               
Conread position:
               
10-408
               

               
Cow position:
               
chr22:41982939-41982543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 132
               

               
Conread position:
               
10-409
               

               
Cow position:
               
chr22:14366178-14365775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
10-409
               

               
Cow position:
               
chr22:16044653-16044222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 6
               

               
Conread position:
               
10-409
               

               
Cow position:
               
chr22:23115529-23115129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 151
               

               
Conread position:
               
10-410
               

               
Cow position:
               
chr22:30483688-30484082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 203
               

               
Conread position:
               
10-410
               

               
Cow position:
               
chr22:32892471-32892874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 131
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr22:6493946-6494354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 132
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr22:12572979-12573384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 237
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr22:12682016-12681622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr22:17950181-17949798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 60
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr22:21012166-21012564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 139
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr22:26151344-26150937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 127
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr22:43397793-43398178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr22:44740879-44741249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 70
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr22:45513745-45513344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
63, 161
               

               
Conread position:
               
10-414
               

               
Cow position:
               
chr22:13957874-13957463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 77
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr22:3301548-3301153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr22:4061167-4060765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr22:5290619-5291038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr22:8877048-8877432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 147
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr22:11130647-11131052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 50
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr22:25206194-25205783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
68, 155
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr22:43812642-43812258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 42
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr22:534269-534673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 192
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr22:7882326-7882734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 137
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr22:8138482-8138071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
89, 129
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr22:8732786-8732380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
31, 157
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr22:10302786-10303199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 193
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr22:10567915-10567535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr22:10631148-10631572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 382
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr22:14691200-14690775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 166
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr22:25361266-25361661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 76
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr22:40121102-40120689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 146
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr22:40349126-40349525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 132
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:644985-644596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:1289743-1289345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 115
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:1484638-1485051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 129
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:1986785-1987156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
152, 69
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:2010575-2010977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:2470471-2470053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
109, 75
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:3251214-3250795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 10
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:3325357-3325772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 273
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:4108963-4108543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
89, 303
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:5467593-5467180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
69, 48
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:5596015-5595623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
310, 73
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:6215778-6215372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:6721290-6720896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 6
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:6754478-6754078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
89, 167
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:8882801-8883195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
315, 11
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:9977595-9977979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
73, 132
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:10122164-10122553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 134
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:10294826-10295213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 64
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:10532270-10532678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 189
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:10937057-10936664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
72, 146
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:11813941-11813539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:13670394-13669982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:13866421-13866853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 325
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:14091456-14091036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
96, 183
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:14245649-14245253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
186, 61
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:15490435-15490840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 154
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:15950601-15950205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:16251791-16251380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
77, 193
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:16273406-16273826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
70, 278
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:16532856-16533257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 102
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:16620949-16621377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
88, 73
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:17152455-17152873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:17852847-17852453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 75
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:18196286-18196695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:18259004-18259401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:18926127-18926541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 124
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:20626617-20627018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 143
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:22022662-22023089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 202
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:22612888-22613287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 76
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:22861136-22860726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 194
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:25246685-25247094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
95, 137
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:25743176-25742781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 286
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:26134459-26134036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
70, 293
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:26339536-26339949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:26786129-26786543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
70, 87
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:27171482-27171084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:27431907-27431499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
278, 89
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:27577509-27577930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
77, 209
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:27818779-27819182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
102, 65
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:28071330-28071743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 287
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:28370722-28371116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:29641886-29642297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 45
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:31196721-31196308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 62
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:32651283-32651699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:36193637-36194016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:37201633-37202033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:38313688-38313289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
89, 72
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:38439382-38438973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 130
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:39508258-39507855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 35
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:40048339-40048743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 60
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:40374382-40374791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
96, 245
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:40386948-40387336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 38
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:41045138-41044724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 285
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:41971381-41970972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:43788353-43787957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
43, 173
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:44717486-44717905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr22:46611005-46610592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 124
               

               
Conread position:
               
10-418
               

               
Cow position:
               
chr22:31646270-31646670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
10-419
               

               
Cow position:
               
chr22:4076123-4075698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 307
               

               
Conread position:
               
10-419
               

               
Cow position:
               
chr22:14143330-14142937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
151, 50
               

               
Conread position:
               
10-419
               

               
Cow position:
               
chr22:21746416-21746825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
10-420
               

               
Cow position:
               
chr22:891364-890969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
11-138
               

               
Cow position:
               
chr22:12381676-12381808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
11-152
               

               
Cow position:
               
chr22:19714703-19714844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
11-197
               

               
Cow position:
               
chr22:35902918-35902736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
11-199
               

               
Cow position:
               
chr22:30954816-30955001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
11-199
               

               
Cow position:
               
chr22:47927538-47927725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
88, 6
               

               
Conread position:
               
11-203
               

               
Cow position:
               
chr22:11837424-11837234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
11-206
               

               
Cow position:
               
chr22:2141591-2141784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 155
               

               
Conread position:
               
11-209
               

               
Cow position:
               
chr22:8446708-8446917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
11-218
               

               
Cow position:
               
chr22:23854758-23854961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
11-222
               

               
Cow position:
               
chr22:24734536-24734320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
11-241
               

               
Cow position:
               
chr22:25341797-25342026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
68, 153
               

               
Conread position:
               
11-265
               

               
Cow position:
               
chr22:3960516-3960249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
62, 205
               

               
Conread position:
               
11-267
               

               
Cow position:
               
chr22:12946388-12946138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr22:4645554-4645830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 51
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr22:16327282-16327554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
102, 73
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr22:22160497-22160783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr22:30963908-30964185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr22:40720511-40720238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
71, 125
               

               
Conread position:
               
11-295
               

               
Cow position:
               
chr22:7884768-7885054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
151, 210
               

               
Conread position:
               
11-313
               

               
Cow position:
               
chr22:6960645-6960924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
259, 53
               

               
Conread position:
               
11-346
               

               
Cow position:
               
chr22:10632692-10633029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
71, 154
               

               
Conread position:
               
11-354
               

               
Cow position:
               
chr22:8481424-8481763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 77
               

               
Conread position:
               
11-369
               

               
Cow position:
               
chr22:10314854-10315214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
11-373
               

               
Cow position:
               
chr22:21890583-21890218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 144
               

               
Conread position:
               
11-392
               

               
Cow position:
               
chr22:1068139-1067754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 187
               

               
Conread position:
               
11-405
               

               
Cow position:
               
chr22:23806769-23806365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 157
               

               
Conread position:
               
11-414
               

               
Cow position:
               
chr22:38940172-38939770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 179
               

               
Conread position:
               
11-414
               

               
Cow position:
               
chr22:45132875-45132468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
75, 56
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr22:42684677-42685065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 231
               

               
Conread position:
               
11-416
               

               
Cow position:
               
chr22:4563139-4563540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 291
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr22:4043710-4044108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr22:4994144-4993731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
69, 199
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr22:6327987-6327589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr22:10161738-10162152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 158
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr22:11146679-11147094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 296
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr22:14844347-14844729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
11-420
               

               
Cow position:
               
chr22:11697431-11697007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 256
               

               
Conread position:
               
11-420
               

               
Cow position:
               
chr22:24066459-24066051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 127
               

               
Conread position:
               
12-152
               

               
Cow position:
               
chr22:34986324-34986186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
12-161
               

               
Cow position:
               
chr22:41417360-41417204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
12-186
               

               
Cow position:
               
chr22:3713043-3713220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr22:4026386-4026572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr22:10683887-10683695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 174
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr22:23861369-23861185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 69
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr22:39293969-39293783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 154
               

               
Conread position:
               
12-200
               

               
Cow position:
               
chr22:29256537-29256338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
12-202
               

               
Cow position:
               
chr22:4161835-4161640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
84, 126
               

               
Conread position:
               
12-206
               

               
Cow position:
               
chr22:37554848-37554649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 189
               

               
Conread position:
               
12-217
               

               
Cow position:
               
chr22:36546153-36545939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
12-229
               

               
Cow position:
               
chr22:22054194-22054423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr22:11500556-11500790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
68, 198
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr22:28179621-28179869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr22:33918121-33917887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
115, 197
               

               
Conread position:
               
12-244
               

               
Cow position:
               
chr22:14118752-14118994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
71, 132
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr22:11257958-11257729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
12-251
               

               
Cow position:
               
chr22:10603170-10603403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
12-285
               

               
Cow position:
               
chr22:33094339-33094622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
12-286
               

               
Cow position:
               
chr22:34611246-34611531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr22:2913056-2913335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
78, 73
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr22:4650959-4651234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr22:5337820-5337541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
49, 120
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr22:5384433-5384712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr22:24611298-24611035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr22:25476841-25477103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 108
               

               
Conread position:
               
12-358
               

               
Cow position:
               
chr22:30049795-30049441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
71, 312
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr22:2502615-2502955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr22:3950019-3950383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
44, 166
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr22:13840915-13841269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
58, 137
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr22:32189061-32188723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr22:13735487-13735114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
67, 149
               

               
Conread position:
               
12-392
               

               
Cow position:
               
chr22:11038052-11038425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
12-411
               

               
Cow position:
               
chr22:2403650-2404059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 257
               

               
Conread position:
               
12-414
               

               
Cow position:
               
chr22:8412302-8412712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 199
               

               
Conread position:
               
12-415
               

               
Cow position:
               
chr22:8418246-8418647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
12-415
               

               
Cow position:
               
chr22:25916820-25917227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
96, 119
               

               
Conread position:
               
12-415
               

               
Cow position:
               
chr22:46665724-46665313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
68, 156
               

               
Conread position:
               
12-416
               

               
Cow position:
               
chr22:29955221-29954832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr22:1975390-1975805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
87, 314
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr22:2095327-2095741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr22:4535549-4535137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 199
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr22:13286222-13286633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 252
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr22:14179054-14178647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 202
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr22:15951098-15950681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr22:21567777-21568176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr22:32661290-32661699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
95, 50
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr22:36563245-36562841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
77, 198
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr22:37029825-37029420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr22:38977627-38978027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr22:28146462-28146870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
87, 129
               

               
Conread position:
               
13-218
               

               
Cow position:
               
chr22:5476582-5476785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 78
               

               
Conread position:
               
13-224
               

               
Cow position:
               
chr22:12974614-12974394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
13-248
               

               
Cow position:
               
chr22:13849671-13849432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 98
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr22:23856827-23857103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 106
               

               
Conread position:
               
13-362
               

               
Cow position:
               
chr22:3964964-3965317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
13-362
               

               
Cow position:
               
chr22:9335504-9335155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
85, 54
               

               
Conread position:
               
13-414
               

               
Cow position:
               
chr22:15068204-15068611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
13-416
               

               
Cow position:
               
chr22:11370812-11370408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 151
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr22:32326580-32326984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
14-245
               

               
Cow position:
               
chr22:6202693-6202929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 124
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr22:1309948-1309553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
82, 189
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr22:6149606-6149203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
69, 147
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr22:30698959-30699350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 117
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr22:39472596-39472176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
92, 104
               

               
Conread position:
               
15-152
               

               
Cow position:
               
chr22:17339982-17339844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
15-219
               

               
Cow position:
               
chr22:12736108-12736314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
83, 170
               

               
Conread position:
               
15-262
               

               
Cow position:
               
chr22:42612238-42612490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 142
               

               
Conread position:
               
15-288
               

               
Cow position:
               
chr22:26184380-26184104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
15-288
               

               
Cow position:
               
chr22:27480672-27480952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
54, 181
               

               
Conread position:
               
15-288
               

               
Cow position:
               
chr22:31213354-31213636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
65, 153
               

               
Conread position:
               
15-415
               

               
Cow position:
               
chr22:37067017-37066624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 165
               

               
Conread position:
               
15-417
               

               
Cow position:
               
chr22:3987293-3987707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 194
               

               
Conread position:
               
15-417
               

               
Cow position:
               
chr22:7081806-7082214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 147
               

               
Conread position:
               
15-417
               

               
Cow position:
               
chr22:13702185-13701775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 199
               

               
Conread position:
               
16-200
               

               
Cow position:
               
chr22:3944956-3945145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr22:5042103-5042331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
82, 101
               

               
Conread position:
               
18-288
               

               
Cow position:
               
chr22:37324330-37324601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
84, 94
               

               
Conread position:
               
19-409
               

               
Cow position:
               
chr22:28640369-28639979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
64, 192
               

               
Conread position:
               
19-416
               

               
Cow position:
               
chr22:2642902-2643297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
144, 62
               

               
Conread position:
               
21-417
               

               
Cow position:
               
chr22:34441848-34441447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 146
               

               
Conread position:
               
22-411
               

               
Cow position:
               
chr22:3533733-3534110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
23-198
               

               
Cow position:
               
chr22:27512374-27512199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
23-288
               

               
Cow position:
               
chr22:43743541-43743288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
197, 63
               

               
Conread position:
               
24-288
               

               
Cow position:
               
chr22:10598187-10598442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 162
               

               
Conread position:
               
25-218
               

               
Cow position:
               
chr22:2945881-2945684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 171
               

               
Conread position:
               
25-417
               

               
Cow position:
               
chr22:12313210-12313604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 169
               

               
Conread position:
               
25-417
               

               
Cow position:
               
chr22:12803592-12803203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
26-222
               

               
Cow position:
               
chr22:1081295-1081497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
26-280
               

               
Cow position:
               
chr22:30471896-30471645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
26-288
               

               
Cow position:
               
chr22:17125374-17125639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 66
               

               
Conread position:
               
26-414
               

               
Cow position:
               
chr22:41829438-41829053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
28-243
               

               
Cow position:
               
chr22:1601977-1602202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 179
               

               
Conread position:
               
28-416
               

               
Cow position:
               
chr22:17126248-17126631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
28-417
               

               
Cow position:
               
chr22:18025763-18025369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
29-189
               

               
Cow position:
               
chr22:13016999-13016837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 118
               

               
Conread position:
               
29-211
               

               
Cow position:
               
chr22:6285713-6285534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
84, 150
               

               
Conread position:
               
29-217
               

               
Cow position:
               
chr22:2560461-2560265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 174
               

               
Conread position:
               
29-279
               

               
Cow position:
               
chr22:5675377-5675132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
29-282
               

               
Cow position:
               
chr22:19653190-19652932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 195
               

               
Conread position:
               
29-288
               

               
Cow position:
               
chr22:3366992-3367243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
29-347
               

               
Cow position:
               
chr22:46568094-46567779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 167
               

               
Conread position:
               
29-390
               

               
Cow position:
               
chr22:27322120-27322465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
29-417
               

               
Cow position:
               
chr22:8429677-8430075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
53, 161
               

               
Conread position:
               
30-175
               

               
Cow position:
               
chr22:11200833-11200980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
30-417
               

               
Cow position:
               
chr22:30998693-30999075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 145
               

               
Conread position:
               
31-200
               

               
Cow position:
               
chr22:3269682-3269505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
31-417
               

               
Cow position:
               
chr22:23689410-23689019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 183
               

               
Conread position:
               
31-417
               

               
Cow position:
               
chr22:30269210-30269586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
68, 109
               

               
Conread position:
               
31-417
               

               
Cow position:
               
chr22:41898652-41898264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
32-288
               

               
Cow position:
               
chr22:14924931-14924675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
32-417
               

               
Cow position:
               
chr22:18021227-18020846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
32-417
               

               
Cow position:
               
chr22:27274895-27274504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
48, 155
               

               
Conread position:
               
33-190
               

               
Cow position:
               
chr22:7252849-7252683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
33-288
               

               
Cow position:
               
chr22:27835337-27835590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
33-416
               

               
Cow position:
               
chr22:14378885-14378508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
35-362
               

               
Cow position:
               
chr22:10420832-10421162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
72, 122
               

               
Conread position:
               
35-414
               

               
Cow position:
               
chr22:1848865-1849257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 279
               

               
Conread position:
               
36-415
               

               
Cow position:
               
chr22:4372843-4373217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
36-417
               

               
Cow position:
               
chr22:12800465-12800859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 273
               

               
Conread position:
               
37-417
               

               
Cow position:
               
chr22:12315614-12315992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 169
               

               
Conread position:
               
38-302
               

               
Cow position:
               
chr22:10678181-10677921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
45, 122
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr22:16053116-16053498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
39-406
               

               
Cow position:
               
chr22:15025299-15024935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
121, 27
               

               
Conread position:
               
39-417
               

               
Cow position:
               
chr22:44410541-44410901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
142, 44
               

               
Conread position:
               
40-242
               

               
Cow position:
               
chr22:22907999-22908202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
40-417
               

               
Cow position:
               
chr22:11600840-11601220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 163
               

               
Conread position:
               
41-288
               

               
Cow position:
               
chr22:877318-877572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
45-343
               

               
Cow position:
               
chr22:590146-590451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
41, 122
               

               
Conread position:
               
45-417
               

               
Cow position:
               
chr22:39696099-39696482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
47-293
               

               
Cow position:
               
chr22:41271187-41270938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 161
               

               
Conread position:
               
48-411
               

               
Cow position:
               
chr22:36433156-36432792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 51
               

               
Conread position:
               
48-415
               

               
Cow position:
               
chr22:4583369-4583744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
38, 205
               

               
Conread position:
               
55-417
               

               
Cow position:
               
chr22:43131728-43131369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
55-420
               

               
Cow position:
               
chr22:12388913-12389290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
56-418
               

               
Cow position:
               
chr22:4162767-4162397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
57-417
               

               
Cow position:
               
chr22:23980394-23980022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 256
               

               
Conread position:
               
59-416
               

               
Cow position:
               
chr22:17132585-17132223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
61-417
               

               
Cow position:
               
chr22:15618441-15618792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 131
               

               
Conread position:
               
62-415
               

               
Cow position:
               
chr22:8090701-8090352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 205
               

               
Conread position:
               
62-415
               

               
Cow position:
               
chr22:32698588-32698946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 208
               

               
Conread position:
               
62-417
               

               
Cow position:
               
chr22:27635307-27635665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
169, 15
               

               
Conread position:
               
63-409
               

               
Cow position:
               
chr22:6097198-6096839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
63-417
               

               
Cow position:
               
chr22:32480654-32480282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
63-417
               

               
Cow position:
               
chr22:45796168-45796529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
64-336
               

               
Cow position:
               
chr22:9283772-9283494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
21, 244
               

               
Conread position:
               
66-332
               

               
Cow position:
               
chr22:14638652-14638376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 242
               

               
Conread position:
               
68-416
               

               
Cow position:
               
chr22:27729890-27730226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
69-417
               

               
Cow position:
               
chr22:9668402-9668764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 244
               

               
Conread position:
               
71-417
               

               
Cow position:
               
chr22:16095062-16094721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
71-417
               

               
Cow position:
               
chr22:33399644-33399304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
72-380
               

               
Cow position:
               
chr22:3315949-3316250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
73-242
               

               
Cow position:
               
chr22:32895057-32895231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
73-417
               

               
Cow position:
               
chr22:30818050-30818394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
74-242
               

               
Cow position:
               
chr22:10292801-10292979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
75-361
               

               
Cow position:
               
chr22:19173540-19173830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
75-416
               

               
Cow position:
               
chr22:12929435-12929094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 127
               

               
Conread position:
               
79-417
               

               
Cow position:
               
chr22:45807685-45808014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
24, 147
               

               
Conread position:
               
81-337
               

               
Cow position:
               
chr22:45845993-45846247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 106
               

               
Conread position:
               
81-362
               

               
Cow position:
               
chr22:31510521-31510249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
81-417
               

               
Cow position:
               
chr22:1563403-1563055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
82-288
               

               
Cow position:
               
chr22:1874541-1874750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
85-411
               

               
Cow position:
               
chr22:39215761-39215433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
85-416
               

               
Cow position:
               
chr22:27066246-27066567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
86-416
               

               
Cow position:
               
chr22:15668622-15668299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
13, 180
               

               
Conread position:
               
87-415
               

               
Cow position:
               
chr22:42635578-42635249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
88-417
               

               
Cow position:
               
chr22:14372039-14372352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 94
               

               
Conread position:
               
89-395
               

               
Cow position:
               
chr22:17224809-17224506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
89-420
               

               
Cow position:
               
chr22:40789424-40789745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
91-253
               

               
Cow position:
               
chr22:27267397-27267563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
93-417
               

               
Cow position:
               
chr22:530716-530393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
43, 117
               

               
Conread position:
               
93-417
               

               
Cow position:
               
chr22:19890821-19891144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 117
               

               
Conread position:
               
95-417
               

               
Cow position:
               
chr22:17581562-17581237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 148
               

               
Conread position:
               
96-360
               

               
Cow position:
               
chr22:25387188-25387456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
96-417
               

               
Cow position:
               
chr22:19828001-19827676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
98-411
               

               
Cow position:
               
chr22:34632003-34632330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 106
               

               
Conread position:
               
98-415
               

               
Cow position:
               
chr22:11767184-11766865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 109
               

               
Conread position:
               
98-417
               

               
Cow position:
               
chr22:31599316-31599617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
97, 38
               

               
Conread position:
               
99-362
               

               
Cow position:
               
chr22:31153823-31154086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
99-419
               

               
Cow position:
               
chr22:39602146-39602472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
100-286
               

               
Cow position:
               
chr22:45019967-45019789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
100-417
               

               
Cow position:
               
chr22:2123162-2123475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
100-417
               

               
Cow position:
               
chr22:29962279-29961966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 134
               

               
Conread position:
               
103-356
               

               
Cow position:
               
chr22:21393448-21393203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 182
               

               
Conread position:
               
103-417
               

               
Cow position:
               
chr22:17193258-17193579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
104-288
               

               
Cow position:
               
chr22:12341066-12341253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
11, 174
               
UCSC Genome Browser

               
Conread position:
               
110-416
               

               
Cow position:
               
chr22:10609232-10609541 (view  custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 219
               
UCSC Genome Browser

               
               
               
Conread position:
111-401

               
               
               
Cow position:
chr22:43237528-43237238 (view  custom track)

               
               
               
Alignm length:
294

               
               
               
Alignm identity:
199

               
               
               
Alignm E-value:
8e-35

               
               
               
Alignm gaps (pig, cow):
51, 89
UCSC Genome Browser

               
               
               
Conread position:
111-417

               
               
               
Cow position:
chr22:5837147-5837446 (view  custom track)

               
               
               
Alignm length:
310

               
               
               
Alignm identity:
202

               
               
               
Alignm E-value:
1e-26

               
               
               
Alignm gaps (pig, cow):
49, 194

               
               
               Conread position:111-417
               
               
               Cow position:chr22:27828263-27828562 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:195
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):51, 77

               
               
               Conread position:115-417
               
               
               Cow position:chr22:898730-899023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:206
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):47, 21

               
               
               Conread position:115-417
               
               
               Cow position:chr22:38320795-38320522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:216
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):47, 71

               
               
               Conread position:116-417
               
               
               Cow position:chr22:12829727-12829425 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:206
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):46, 84

               
               
               Conread position:120-392
               
               
               Cow position:chr22:37947611-37947886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:184
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):42, 173

               
               
               Conread position:121-359
               
               
               Cow position:chr22:1870990-1871226 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:167
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):73, 39

               
               
               Conread position:121-417
               
               
               Cow position:chr22:12892477-12892176 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:207
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):60, 33

               
               
               Conread position:123-417
               
               
               Cow position:chr22:27619620-27619922 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:201
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):42, 184

               
               
               Conread position:124-417
               
               
               Cow position:chr22:285467-285182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:214
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):41, 51

               
               
               Conread position:129-416
               
               
               Cow position:chr22:9597683-9597401 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:194
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):33, 192

               
               
               Conread position:133-419
               
               
               Cow position:chr22:1983753-1984044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:213
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):29, 66

               
               
               Conread position:137-409
               
               
               Cow position:chr22:14214457-14214194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:189
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):25, 12

               
               
               Conread position:139-417
               
               
               Cow position:chr22:1659069-1659352 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:208
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):63, 120

               
               
               Conread position:140-416
               
               
               Cow position:chr22:43321256-43321535 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:188
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):25, 95

               
               
               Conread position:141-414
               
               
               Cow position:chr22:25254084-25254356 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:181
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):24, 62

               
               
               Conread position:141-417
               
               
               Cow position:chr22:17652342-17652617 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):21, 163

               
               
               Conread position:141-417
               
               
               Cow position:chr22:24903498-24903776 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:205
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):21, 87

               
               
               Conread position:142-399
               
               
               Cow position:chr22:4315538-4315803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:192
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):21, 67

               
               
               Conread position:146-417
               
               
               Cow position:chr22:12678506-12678236 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):16, 57

               
               
               Conread position:146-417
               
               
               Cow position:chr22:16541738-16541464 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:182
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):17, 52

               
               
               Conread position:156-415
               
               
               Cow position:chr22:1025811-1026086 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:195
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):6, 53

               
               
               Conread position:157-415
               
               
               Cow position:chr22:12981798-12981542 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):5, 113

               
               
               Conread position:161-415
               
               
               Cow position:chr22:26056940-26056684 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:183
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):33, 145

               
               
               Conread position:161-419
               
               
               Cow position:chr22:12157913-12157662 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):37, 18

               
               
               Conread position:164-346
               
               
               Cow position:chr22:4137718-4137535 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:127
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):150, 134

               
               
               Conread position:164-401
               
               
               Cow position:chr22:1349756-1350001 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):35, 183

               
               
               Conread position:164-417
               
               
               Cow position:chr22:2109690-2109445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:177
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):156, 26

               
               
               Conread position:165-417
               
               
               Cow position:chr22:42617932-42618180 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:180
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):32, 138

               
               
               Conread position:169-417
               
               
               Cow position:chr22:18099555-18099804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):18, 134

               
               
               Conread position:175-417
               
               
               Cow position:chr22:2101003-2100764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):33, 82

               
               
               Conread position:188-415
               
               
               Cow position:chr22:12902892-12902673 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):11, 60

               
               
               Conread position:189-417
               
               
               Cow position:chr22:24134366-24134138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):17, 81

               
               
               Conread position:193-417
               
               
               Cow position:chr22:10557244-10557457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:155
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):110, 13

               
               
               Conread position:194-417
               
               
               Cow position:chr22:33985835-33985622 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):120, 10

               
               
               Conread position:195-417
               
               
               Cow position:chr22:14141378-14141156 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:157
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):124, 106

               
               
               Conread position:196-417
               
               
               Cow position:chr22:4163943-4164164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:162
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):12, 60

               
               
               Conread position:197-417
               
               
               Cow position:chr22:6176320-6176097 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:159
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):13, 51

               
               
               Conread position:200-417
               
               
               Cow position:chr22:1776028-1776248 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):107, 101

               
               
               Conread position:205-417
               
               
               Cow position:chr22:4156843-4156631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:144
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):66, 71

               
               
               Conread position:209-414
               
               
               Cow position:chr22:26233611-26233815 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):112, 15

               
               
               Conread position:215-415
               
               
               Cow position:chr22:33948989-33948794 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:142
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):36, 78

               
               
               Conread position:216-416
               
               
               Cow position:chr22:7584251-7584059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:146
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):104, 51

               
               
               Conread position:216-417
               
               
               Cow position:chr22:16813783-16813980 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:154
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):104, 66

               
               
               Conread position:230-415
               
               
               Cow position:chr22:24890220-24890403 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):15, 21

               
               
               Conread position:233-417
               
               
               Cow position:chr22:26188872-26189057 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:128
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):87, 68

               
               
               Conread position:236-417
               
               
               Cow position:chr22:7518560-7518739 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):66, 72

               
               
               Conread position:245-417
               
               
               Cow position:chr22:9735283-9735453 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:125
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):75, 58

               
               
               Conread position:268-420
               
               
               Cow position:chr22:33566057-33565907 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):46, 35
Show alignments to all cow chromosomes.