Cow genome map
| Conread name: | Ss1.1-rpgl01_e1.5 |
| Conread position: | 1-205 |
| Cow position: | chr17:44467526-44467730 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-205 |
| Cow position: | chr17:44468030-44468234 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 111, 118 |
| Conread position: | 1-212 |
| Cow position: | chr17:44467610-44467821 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-233 |
| Cow position: | chr17:41440533-41440300 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 1-235 |
| Cow position: | chr17:41440785-41440550 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 108 |
| Conread position: | 1-235 |
| Cow position: | chr17:41440953-41440718 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 62, 58 |
| Conread position: | 1-244 |
| Cow position: | chr17:44467862-44468106 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 126, 134 |
| Conread position: | 1-244 |
| Cow position: | chr17:44467946-44468190 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 186, 192 |
| Conread position: | 1-247 |
| Cow position: | chr17:44468114-44468361 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 1-253 |
| Cow position: | chr17:41440449-41440196 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 1-261 |
| Cow position: | chr17:41441037-41440776 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 1-261 |
| Cow position: | chr17:44467778-44468039 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 1-278 |
| Cow position: | chr17:44467442-44467721 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 1-279 |
| Cow position: | chr17:44467357-44467638 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 54 |
| Conread position: | 2-238 |
| Cow position: | chr17:41440616-41440379 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 2-238 |
| Cow position: | chr17:41440700-41440463 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 62 |
| Conread position: | 4-178 |
| Cow position: | chr17:41440362-41440188 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-216 |
| Cow position: | chr17:41441118-41440905 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 6-244 |
| Cow position: | chr17:41440864-41440625 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 200, 0 |
Show alignments to all cow chromosomes.