Cow genome map
Conread name: | Ss1.1-rpgl01_e1.5 |
Conread position: | 1-171 |
Cow position: | chr18:56329008-56328838 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 120 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-178 |
Cow position: | chr18:49033211-49033034 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 126 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-179 |
Cow position: | chr18:53635537-53635359 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 128 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-179 |
Cow position: | chr18:56128628-56128806 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 126 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-180 |
Cow position: | chr18:55497199-55497019 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 124 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 165, 0 |
Conread position: | 1-197 |
Cow position: | chr18:33064263-33064067 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 133 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-197 |
Cow position: | chr18:56316136-56316332 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 133 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-197 |
Cow position: | chr18:56316808-56317004 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 133 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-199 |
Cow position: | chr18:55067023-55066825 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 135 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 126, 145 |
Conread position: | 1-205 |
Cow position: | chr18:52012272-52012068 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 144 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 134, 148 |
Conread position: | 1-205 |
Cow position: | chr18:53610212-53610008 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-205 |
Cow position: | chr18:53635621-53635417 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-205 |
Cow position: | chr18:56128544-56128748 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 144 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-205 |
Cow position: | chr18:56316388-56316592 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 143 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 45, 31 |
Conread position: | 1-205 |
Cow position: | chr18:56329092-56328888 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 138 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-208 |
Cow position: | chr18:53610296-53610089 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 144 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-208 |
Cow position: | chr18:56128208-56128416 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 142 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 195, 0 |
Conread position: | 1-216 |
Cow position: | chr18:53610044-53609828 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 144 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 195, 0 |
Conread position: | 1-223 |
Cow position: | chr18:42724165-42723942 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 152 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 32, 37 |
Conread position: | 1-226 |
Cow position: | chr18:56128796-56129022 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 149 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 1-232 |
Cow position: | chr18:52012188-52011956 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 155 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 215, 0 |
Conread position: | 1-233 |
Cow position: | chr18:55497367-55497134 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 164 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 137, 148 |
Conread position: | 1-233 |
Cow position: | chr18:55497535-55497302 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 157 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 197, 0 |
Conread position: | 1-233 |
Cow position: | chr18:56329260-56329027 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 164 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 51, 44 |
Conread position: | 1-234 |
Cow position: | chr18:56267373-56267139 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 155 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 210, 0 |
Conread position: | 1-238 |
Cow position: | chr18:49033295-49033057 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 158 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 1-238 |
Cow position: | chr18:56330016-56329778 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 160 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 1-238 |
Cow position: | chr18:56391176-56390938 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 165 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 116, 141 |
Conread position: | 1-238 |
Cow position: | chr18:56391260-56391022 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 165 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 65, 59 |
Conread position: | 1-239 |
Cow position: | chr18:56391428-56391189 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 159 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 135, 141 |
Conread position: | 1-244 |
Cow position: | chr18:49032455-49032211 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 163 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 196, 0 |
Conread position: | 1-244 |
Cow position: | chr18:49033127-49032883 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 167 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 204, 0 |
Conread position: | 1-244 |
Cow position: | chr18:52012020-52011776 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 164 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 1-244 |
Cow position: | chr18:52012104-52011860 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 167 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 144, 126 |
Conread position: | 1-244 |
Cow position: | chr18:55497451-55497207 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 166 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 127, 134 |
Conread position: | 1-244 |
Cow position: | chr18:56128460-56128704 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 167 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 1-244 |
Cow position: | chr18:56316472-56316716 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 162 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 1-244 |
Cow position: | chr18:56316556-56316800 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 163 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 195, 0 |
Conread position: | 1-244 |
Cow position: | chr18:56329176-56328932 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 166 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 1-244 |
Cow position: | chr18:56329428-56329184 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 168 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 1-244 |
Cow position: | chr18:56329512-56329268 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 170 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 1-244 |
Cow position: | chr18:56329764-56329520 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 161 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 204, 0 |
Conread position: | 1-244 |
Cow position: | chr18:56391512-56391268 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 166 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 36, 31 |
Conread position: | 1-245 |
Cow position: | chr18:53609960-53609715 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 160 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 213, 0 |
Conread position: | 1-245 |
Cow position: | chr18:56128880-56129125 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 156 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 213, 0 |
Conread position: | 1-246 |
Cow position: | chr18:42724501-42724255 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 158 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 202, 0 |
Conread position: | 1-248 |
Cow position: | chr18:56391899-56391651 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 172 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 57, 63 |
Conread position: | 1-254 |
Cow position: | chr18:56316640-56316894 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 174 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 111, 119 |
Conread position: | 1-255 |
Cow position: | chr18:56391092-56390837 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 173 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 32, 48 |
Conread position: | 1-260 |
Cow position: | chr18:56316724-56316984 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 176 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 1-261 |
Cow position: | chr18:49032959-49032698 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 173 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 137, 148 |
Conread position: | 1-261 |
Cow position: | chr18:56267457-56267196 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 181 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 1-263 |
Cow position: | chr18:53635285-53635023 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 174 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 213, 247 |
Conread position: | 1-264 |
Cow position: | chr18:53610380-53610116 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 178 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 1-264 |
Cow position: | chr18:53635453-53635189 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 168 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 205, 227 |
Conread position: | 1-264 |
Cow position: | chr18:53635705-53635441 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 180 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 1-264 |
Cow position: | chr18:56128712-56128976 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 168 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 205, 227 |
Conread position: | 1-265 |
Cow position: | chr18:56329344-56329079 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 189 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 129, 148 |
Conread position: | 1-276 |
Cow position: | chr18:33064515-33064238 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 176 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 126, 134 |
Conread position: | 1-276 |
Cow position: | chr18:56329680-56329403 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 185 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 146, 126 |
Conread position: | 1-276 |
Cow position: | chr18:56330184-56329907 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 180 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 148, 135 |
Conread position: | 1-278 |
Cow position: | chr18:56316304-56316583 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 179 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 186, 193 |
Conread position: | 1-278 |
Cow position: | chr18:56329596-56329317 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 188 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 136, 142 |
Conread position: | 1-278 |
Cow position: | chr18:56329848-56329569 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 188 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 49, 56 |
Conread position: | 2-205 |
Cow position: | chr18:42724584-42724381 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 135 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-244 |
Cow position: | chr18:49033378-49033135 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 160 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 204, 222 |
Conread position: | 2-244 |
Cow position: | chr18:55497282-55497039 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 167 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 56, 61 |
Conread position: | 3-205 |
Cow position: | chr18:33093101-33092899 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 137 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 62, 49 |
Conread position: | 3-205 |
Cow position: | chr18:53636039-53635837 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 134 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-205 |
Cow position: | chr18:56128126-56128328 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 141 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 49, 60 |
Conread position: | 3-233 |
Cow position: | chr18:53610462-53610231 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 156 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 193, 0 |
Conread position: | 3-239 |
Cow position: | chr18:55497617-55497380 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 163 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 221, 0 |
Conread position: | 9-261 |
Cow position: | chr18:55497695-55497442 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 169 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 51, 56 |
Conread position: | 15-244 |
Cow position: | chr18:56391969-56391739 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 152 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 43, 49 |
Show alignments to all cow chromosomes.