Cow genome map
| Conread name: | Ss1.1-rpgl10_f12.5 |
| Conread position: | 171-767 |
| Cow position: | chr10:8996931-8996335 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 229-505 |
| Cow position: | chr10:9031388-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-716 |
| Cow position: | chr10:9010344-9009862 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 230 |
| Conread position: | 252-767 |
| Cow position: | chr10:8996682-8996167 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 253-717 |
| Cow position: | chr10:21938913-21938448 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 283, 150 |
| Conread position: | 253-768 |
| Cow position: | chr10:8996764-8996250 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 256-673 |
| Cow position: | chr10:9031247-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 257-706 |
| Cow position: | chr10:21939077-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 63, 58 |
| Conread position: | 257-759 |
| Cow position: | chr10:8996425-8995932 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 426, 0 |
| Conread position: | 257-763 |
| Cow position: | chr10:8996509-8996003 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 213 |
| Conread position: | 257-768 |
| Cow position: | chr10:8996593-8996082 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-659 |
| Cow position: | chr10:9010231-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 260 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 142, 9 |
| Conread position: | 271-763 |
| Cow position: | chr10:9010391-9009899 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 272-753 |
| Cow position: | chr10:9031664-9032144 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 149, 336 |
| Conread position: | 275-757 |
| Cow position: | chr10:9031182-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 115 |
| Conread position: | 277-761 |
| Cow position: | chr10:9010469-9009985 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 379, 371 |
| Conread position: | 281-768 |
| Cow position: | chr10:21939137-21938653 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 107, 123 |
| Conread position: | 292-768 |
| Cow position: | chr10:8996894-8996418 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 228 |
| Conread position: | 303-761 |
| Cow position: | chr10:9010527-9010069 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 101 |
| Conread position: | 323-719 |
| Cow position: | chr10:9010591-9010195 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 164, 149 |
| Conread position: | 331-707 |
| Cow position: | chr10:21939171-21938795 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 144, 139 |
| Conread position: | 337-767 |
| Cow position: | chr10:8996933-8996503 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 364-672 |
| Cow position: | chr10:9031672-9031991 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 364-768 |
| Cow position: | chr10:21939222-21938818 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 207, 195 |
| Conread position: | 406-767 |
| Cow position: | chr10:9010592-9010231 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 151, 158 |
| Conread position: | 408-768 |
| Cow position: | chr10:9031231-9031591 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 532-768 |
| Cow position: | chr10:9031187-9031423 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 571-768 |
| Cow position: | chr10:9010511-9010314 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 67, 80 |
Show alignments to all cow chromosomes.