Cow genome map
| Conread name: | Ss1.1-rpgl10_f12.5 |
| Conread position: | 83-767 |
| Cow position: | chr13:39983645-39984326 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 232-668 |
| Cow position: | chr13:39984463-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 232-767 |
| Cow position: | chr13:39984127-39984662 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 232-767 |
| Cow position: | chr13:39984295-39984830 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 232-768 |
| Cow position: | chr13:56333775-56334320 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 301 |
| Conread position: | 233-768 |
| Cow position: | chr13:56292469-56291939 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 347 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 24, 39 |
| Conread position: | 234-464 |
| Cow position: | chr13:56334122-56334350 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 210, 200 |
| Conread position: | 234-768 |
| Cow position: | chr13:56333693-56334236 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 64 |
| Conread position: | 239-575 |
| Cow position: | chr13:56292132-56291795 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 0 |
| Conread position: | 251-767 |
| Cow position: | chr13:39983895-39984410 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 467, 20 |
| Conread position: | 252-713 |
| Cow position: | chr13:56292702-56292235 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 136, 186 |
| Conread position: | 254-767 |
| Cow position: | chr13:39984233-39984746 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 365, 372 |
| Conread position: | 254-767 |
| Cow position: | chr13:56333545-56334058 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 318 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 148, 140 |
| Conread position: | 255-684 |
| Cow position: | chr13:56292197-56291770 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 30 |
| Conread position: | 257-756 |
| Cow position: | chr13:39984404-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-763 |
| Cow position: | chr13:39983987-39984490 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 268-661 |
| Cow position: | chr13:56292849-56292461 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 74 |
| Conread position: | 270-763 |
| Cow position: | chr13:39984081-39984574 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 447, 460 |
| Conread position: | 271-632 |
| Cow position: | chr13:56317361-56317714 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 277-719 |
| Cow position: | chr13:22124865-22125307 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 210, 195 |
| Conread position: | 277-763 |
| Cow position: | chr13:24162591-24163077 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 126, 120 |
| Conread position: | 277-768 |
| Cow position: | chr13:22125033-22125524 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 58 |
| Conread position: | 277-768 |
| Cow position: | chr13:24162759-24163250 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 297-768 |
| Cow position: | chr13:56333504-56333975 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 93, 86 |
| Conread position: | 311-630 |
| Cow position: | chr13:56317479-56317796 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 90, 65 |
| Conread position: | 311-761 |
| Cow position: | chr13:56292301-56291862 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 296 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 76, 88 |
| Conread position: | 319-668 |
| Cow position: | chr13:56317930-56318285 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 80, 66 |
| Conread position: | 319-719 |
| Cow position: | chr13:22125243-22125643 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 78, 84 |
| Conread position: | 319-719 |
| Cow position: | chr13:24162969-24163369 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 78, 84 |
| Conread position: | 319-719 |
| Cow position: | chr13:56317325-56317717 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 140, 133 |
| Conread position: | 360-767 |
| Cow position: | chr13:56333105-56333512 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 48 |
| Conread position: | 374-768 |
| Cow position: | chr13:56317296-56317682 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 412-755 |
| Cow position: | chr13:56292872-56292534 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 117, 18 |
Show alignments to all cow chromosomes.