Cow genome map

Conread name: Ss1.1-rpgl10_f12.5

Conread position: 50-767
Cow position:
Alignm length: 725
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 215-618
Cow position:
Alignm length: 404
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 229-611
Cow position:
Alignm length: 384
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 68

Conread position: 229-767
Cow position:
Alignm length: 542
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 88

Conread position: 232-768
Cow position:
Alignm length: 537
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 234-761
Cow position:
Alignm length: 530
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 317

Conread position: 234-768
Cow position:
Alignm length: 535
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 531, 0

Conread position: 239-692
Cow position:
Alignm length: 456
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 281

Conread position: 239-767
Cow position:
Alignm length: 533
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 46

Conread position: 239-767
Cow position:
Alignm length: 530
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 488, 477

Conread position: 239-768
Cow position:
Alignm length: 531
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 488, 478

Conread position: 239-768
Cow position:
Alignm length: 533
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 251

Conread position: 240-629
Cow position:
Alignm length: 391
Alignm identity: 250
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 247, 225

Conread position: 245-713
Cow position:
Alignm length: 471
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 304

Conread position: 245-759
Cow position:
Alignm length: 519
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 413

Conread position: 251-766
Cow position:
Alignm length: 517
Alignm identity: 318
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 53

Conread position: 251-768
Cow position:
Alignm length: 519
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 8

Conread position: 252-546
Cow position:
Alignm length: 296
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 152, 129

Conread position: 252-767
Cow position:
Alignm length: 516
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 252-767
Cow position:
Alignm length: 516
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 252-767
Cow position:
Alignm length: 519
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 399

Conread position: 252-768
Cow position:
Alignm length: 518
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 231

Conread position: 253-768
Cow position:
Alignm length: 517
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 18

Conread position: 253-768
Cow position:
Alignm length: 518
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 18

Conread position: 256-767
Cow position:
Alignm length: 513
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 15

Conread position: 257-691
Cow position:
Alignm length: 436
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 147

Conread position: 257-762
Cow position:
Alignm length: 509
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 231

Conread position: 257-763
Cow position:
Alignm length: 511
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 147

Conread position: 257-768
Cow position:
Alignm length: 512
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 257-768
Cow position:
Alignm length: 513
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 503, 0

Conread position: 257-768
Cow position:
Alignm length: 512
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 257-768
Cow position:
Alignm length: 512
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 258-768
Cow position:
Alignm length: 511
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 265-767
Cow position:
Alignm length: 505
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 387

Conread position: 269-511
Cow position:
Alignm length: 244
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 28

Conread position: 269-692
Cow position:
Alignm length: 424
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 0

Conread position: 269-768
Cow position:
Alignm length: 500
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 270-755
Cow position:
Alignm length: 486
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 271-768
Cow position:
Alignm length: 499
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 133

Conread position: 271-768
Cow position:
Alignm length: 500
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 296

Conread position: 277-722
Cow position:
Alignm length: 447
Alignm identity: 263
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 120

Conread position: 277-763
Cow position:
Alignm length: 491
Alignm identity: 292
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 31

Conread position: 277-767
Cow position:
Alignm length: 491
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 277-768
Cow position:
Alignm length: 495
Alignm identity: 287
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 79

Conread position: 282-767
Cow position:
Alignm length: 486
Alignm identity: 290
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 304-763
Cow position:
Alignm length: 462
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 44

Conread position: 304-768
Cow position:
Alignm length: 467
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 414

Conread position: 318-767
Cow position:
Alignm length: 453
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 319-713
Cow position:
Alignm length: 395
Alignm identity: 229
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 319-763
Cow position:
Alignm length: 446
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 133

Conread position: 323-719
Cow position:
Alignm length: 400
Alignm identity: 241
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 78

Conread position: 343-719
Cow position:
Alignm length: 380
Alignm identity: 237
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 61, 54

Conread position: 393-766
Cow position:
Alignm length: 374
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 404-768
Cow position:
Alignm length: 366
Alignm identity: 233
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 227, 238

Conread position: 406-768
Cow position:
Alignm length: 363
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 486-768
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 561-768
Cow position:
Alignm length: 208
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.