Cow genome map
Conread name: | Ss1.1-rpgl10_f12.5 |
Conread position: | 67-716 |
Cow position: | chr19:14960409-14959764 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 102 |
Conread position: | 75-763 |
Cow position: | chr19:14940314-14941002 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 80 |
Conread position: | 98-763 |
Cow position: | chr19:23614033-23614698 (view UCSC Genome Browser custom track) |
Alignm length: | 670 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 44 |
Conread position: | 215-767 |
Cow position: | chr19:23614319-23614870 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 20 |
Conread position: | 216-678 |
Cow position: | chr19:14959277-14958823 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 15 |
Conread position: | 217-768 |
Cow position: | chr19:23596828-23597376 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 0 |
Conread position: | 228-768 |
Cow position: | chr19:23614247-23614787 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 80 |
Conread position: | 229-768 |
Cow position: | chr19:14959509-14958985 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 344 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 91, 72 |
Conread position: | 229-768 |
Cow position: | chr19:14960331-14959796 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 427, 178 |
Conread position: | 232-625 |
Cow position: | chr19:23597344-23597736 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 40 |
Conread position: | 233-548 |
Cow position: | chr19:23614756-23615071 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 215 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 73, 66 |
Conread position: | 233-671 |
Cow position: | chr19:43570076-43569642 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 157 |
Conread position: | 233-763 |
Cow position: | chr19:14960411-14959883 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 39 |
Conread position: | 233-766 |
Cow position: | chr19:14916027-14916543 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 348 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 18, 27 |
Conread position: | 233-768 |
Cow position: | chr19:23613496-23614031 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 233-768 |
Cow position: | chr19:23614084-23614619 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 234-768 |
Cow position: | chr19:20677596-20678130 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 253, 248 |
Conread position: | 234-768 |
Cow position: | chr19:23649871-23650405 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 237-767 |
Cow position: | chr19:14940056-14940586 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 68 |
Conread position: | 239-500 |
Cow position: | chr19:14940814-14941075 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 182 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 46, 77 |
Conread position: | 239-572 |
Cow position: | chr19:14948313-14947979 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 222 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 248, 244 |
Conread position: | 239-624 |
Cow position: | chr19:14948397-14948011 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 280 |
Conread position: | 239-768 |
Cow position: | chr19:23613922-23614451 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 488, 478 |
Conread position: | 239-768 |
Cow position: | chr19:23649708-23650237 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 69 |
Conread position: | 240-767 |
Cow position: | chr19:23649289-23649816 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 240-768 |
Cow position: | chr19:14940143-14940671 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 245-768 |
Cow position: | chr19:43570552-43570045 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 334 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 134, 87 |
Conread position: | 246-767 |
Cow position: | chr19:14939981-14940502 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 250-768 |
Cow position: | chr19:14915960-14916463 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 329 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 37, 9 |
Conread position: | 250-768 |
Cow position: | chr19:20678117-20678634 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 251-768 |
Cow position: | chr19:23613431-23613947 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 252-716 |
Cow position: | chr19:14940575-14941039 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 145 |
Conread position: | 252-763 |
Cow position: | chr19:23649469-23649980 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 367, 374 |
Conread position: | 252-767 |
Cow position: | chr19:23613346-23613862 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 252-768 |
Cow position: | chr19:23649553-23650069 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 50 |
Conread position: | 252-768 |
Cow position: | chr19:23649805-23650321 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 147 |
Conread position: | 253-767 |
Cow position: | chr19:23613852-23614366 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 59 |
Conread position: | 253-768 |
Cow position: | chr19:20677531-20678046 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 56 |
Conread position: | 254-763 |
Cow position: | chr19:23649387-23649896 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 255-768 |
Cow position: | chr19:20635714-20635202 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 256-767 |
Cow position: | chr19:23597031-23597543 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 256-767 |
Cow position: | chr19:23614024-23614534 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 256-768 |
Cow position: | chr19:23613267-23613779 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 466, 483 |
Conread position: | 257-584 |
Cow position: | chr19:14940748-14941075 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 225 |
Conread position: | 257-681 |
Cow position: | chr19:23650062-23650486 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 257-683 |
Cow position: | chr19:23597285-23597711 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 399, 386 |
Conread position: | 257-686 |
Cow position: | chr19:20635377-20634951 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 277 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 126, 133 |
Conread position: | 257-686 |
Cow position: | chr19:20678375-20678801 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 278 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 230, 209 |
Conread position: | 257-753 |
Cow position: | chr19:23614612-23615108 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 39 |
Conread position: | 257-763 |
Cow position: | chr19:20635545-20635039 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 301 |
Conread position: | 257-763 |
Cow position: | chr19:20635629-20635123 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 15 |
Conread position: | 257-767 |
Cow position: | chr19:14940328-14940838 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 308 |
Conread position: | 257-767 |
Cow position: | chr19:14959565-14959070 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 226, 213 |
Conread position: | 257-767 |
Cow position: | chr19:23613688-23614198 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 257-767 |
Cow position: | chr19:23649642-23650152 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 306 |
Conread position: | 257-768 |
Cow position: | chr19:14959397-14958901 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 326 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 63, 57 |
Conread position: | 257-768 |
Cow position: | chr19:14959969-14959474 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 28 |
Conread position: | 257-768 |
Cow position: | chr19:20677955-20678466 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 53 |
Conread position: | 257-768 |
Cow position: | chr19:23613604-23614115 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 257-768 |
Cow position: | chr19:43570220-43569711 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 301 |
Conread position: | 258-768 |
Cow position: | chr19:23614445-23614955 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 207 |
Conread position: | 259-511 |
Cow position: | chr19:23614866-23615118 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 174 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 219, 207 |
Conread position: | 259-767 |
Cow position: | chr19:23613774-23614282 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 259-768 |
Cow position: | chr19:14959647-14959147 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 145 |
Conread position: | 259-768 |
Cow position: | chr19:23614530-23615039 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 122 |
Conread position: | 259-768 |
Cow position: | chr19:43570376-43569878 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 262-762 |
Cow position: | chr19:20677709-20678208 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 9 |
Conread position: | 267-762 |
Cow position: | chr19:14959312-14958823 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 0 |
Conread position: | 268-744 |
Cow position: | chr19:14948451-14947978 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 388, 47 |
Conread position: | 269-761 |
Cow position: | chr19:20678219-20678711 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 224 |
Conread position: | 269-762 |
Cow position: | chr19:23597213-23597706 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 183 |
Conread position: | 269-767 |
Cow position: | chr19:14940424-14940922 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 209 |
Conread position: | 270-758 |
Cow position: | chr19:23649991-23650479 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 271-669 |
Cow position: | chr19:14940678-14941076 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 300, 296 |
Conread position: | 271-768 |
Cow position: | chr19:20677465-20677962 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 133 |
Conread position: | 276-682 |
Cow position: | chr19:14959712-14959308 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 34 |
Conread position: | 277-768 |
Cow position: | chr19:23596972-23597460 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 277-768 |
Cow position: | chr19:23597137-23597628 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 444, 449 |
Conread position: | 280-767 |
Cow position: | chr19:43570278-43569794 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 292-768 |
Cow position: | chr19:14960436-14959962 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 0 |
Conread position: | 322-765 |
Cow position: | chr19:14939973-14940416 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 330-761 |
Cow position: | chr19:20677440-20677871 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 274 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 388, 396 |
Conread position: | 330-768 |
Cow position: | chr19:14915955-14916390 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 284 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 50, 13 |
Conread position: | 337-763 |
Cow position: | chr19:14960475-14960051 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 131 |
Conread position: | 364-761 |
Cow position: | chr19:20677309-20677703 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 247 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 282, 50 |
Conread position: | 367-767 |
Cow position: | chr19:14948514-14948121 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 403-768 |
Cow position: | chr19:23649284-23649649 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 235 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 83, 69 |
Conread position: | 421-768 |
Cow position: | chr19:14960475-14960130 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 322, 0 |
Conread position: | 434-763 |
Cow position: | chr19:20677295-20677621 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 203 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 260, 56 |
Conread position: | 487-768 |
Cow position: | chr19:14948484-14948204 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 183 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.