Cow genome map

Conread name: Ss1.1-rpgl10_f12.5

Conread position: 229-767
Cow position: chr2:78754974-78755511 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 161

Conread position: 231-716
Cow position: chr2:86465662-86466147 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 309
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 66, 77

Conread position: 232-768
Cow position: chr2:78754074-78754605 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 331
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 41

Conread position: 239-768
Cow position: chr2:78754496-78755009 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 151

Conread position: 245-768
Cow position: chr2:78754586-78755093 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 329
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 104, 0

Conread position: 252-761
Cow position: chr2:78755249-78755754 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 88

Conread position: 252-763
Cow position: chr2:78754913-78755423 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 463, 424

Conread position: 257-757
Cow position: chr2:82799948-82800448 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 223

Conread position: 257-761
Cow position: chr2:82799864-82800368 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 310

Conread position: 257-763
Cow position: chr2:86465268-86465774 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 306
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 131, 137

Conread position: 258-768
Cow position: chr2:78755589-78756098 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 310
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 213, 78

Conread position: 259-680
Cow position: chr2:48689453-48689033 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 262
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 48, 38

Conread position: 259-767
Cow position: chr2:78754183-78754688 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 319
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 238, 12

Conread position: 262-682
Cow position: chr2:78756012-78756428 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 270
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 9

Conread position: 268-707
Cow position: chr2:82799539-82799978 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 268-766
Cow position: chr2:86465363-86465861 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 299
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 400, 390

Conread position: 268-768
Cow position: chr2:82799707-82800207 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 30

Conread position: 269-766
Cow position: chr2:78754442-78754923 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 322
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 41, 27

Conread position: 270-768
Cow position: chr2:78754847-78755344 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 288

Conread position: 270-768
Cow position: chr2:78755517-78756012 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 113

Conread position: 270-768
Cow position: chr2:82799457-82799955 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 188

Conread position: 271-761
Cow position: chr2:82799626-82800116 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 43

Conread position: 271-763
Cow position: chr2:86465198-86465690 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 293
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 51, 55

Conread position: 271-768
Cow position: chr2:82799794-82800291 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 372

Conread position: 277-713
Cow position: chr2:5874740-5874303 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 272
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 30

Conread position: 277-763
Cow position: chr2:5874992-5874506 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 293
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 295, 289

Conread position: 280-712
Cow position: chr2:86465795-86466225 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 256
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 207, 192

Conread position: 303-768
Cow position: chr2:86464980-86465443 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 276
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 169, 9

Conread position: 319-716
Cow position: chr2:78754410-78754801 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 240
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 226, 32

Conread position: 319-717
Cow position: chr2:48689477-48689080 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 250
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 302, 62

Conread position: 319-768
Cow position: chr2:78754812-78755261 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 319-768
Cow position: chr2:86465078-86465527 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 269
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 146, 171

Conread position: 324-766
Cow position: chr2:78755905-78756346 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 283
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 139, 145

Conread position: 324-768
Cow position: chr2:86465671-86466115 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 274
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 66

Conread position: 341-768
Cow position: chr2:5875180-5874753 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 254
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 279, 304

Conread position: 375-767
Cow position: chr2:86464966-86465358 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 235
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 133

Show alignments to all cow chromosomes.