Cow genome map

Conread name: Ss1.1-rpgl10_f12.5

Conread position: 229-524
Cow position:
Alignm length: 296
Alignm identity: 201
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 233-768
Cow position:
Alignm length: 537
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 265

Conread position: 234-713
Cow position:
Alignm length: 482
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 18

Conread position: 234-713
Cow position:
Alignm length: 483
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 38

Conread position: 234-747
Cow position:
Alignm length: 515
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 285

Conread position: 239-714
Cow position:
Alignm length: 476
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 249-768
Cow position:
Alignm length: 520
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 249-768
Cow position:
Alignm length: 523
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 36

Conread position: 252-768
Cow position:
Alignm length: 518
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 398

Conread position: 252-768
Cow position:
Alignm length: 519
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 319

Conread position: 253-632
Cow position:
Alignm length: 383
Alignm identity: 249
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 16, 0

Conread position: 254-551
Cow position:
Alignm length: 300
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 138, 150

Conread position: 257-514
Cow position:
Alignm length: 258
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 257-516
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 257-530
Cow position:
Alignm length: 275
Alignm identity: 185
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 147, 140

Conread position: 257-537
Cow position:
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 0

Conread position: 257-607
Cow position:
Alignm length: 352
Alignm identity: 235
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 314, 308

Conread position: 257-633
Cow position:
Alignm length: 379
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 144

Conread position: 257-636
Cow position:
Alignm length: 383
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 51

Conread position: 257-669
Cow position:
Alignm length: 413
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 257-684
Cow position:
Alignm length: 430
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 209

Conread position: 257-763
Cow position:
Alignm length: 508
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 475, 483

Conread position: 257-767
Cow position:
Alignm length: 511
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 257-768
Cow position:
Alignm length: 512
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 259-763
Cow position:
Alignm length: 505
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 259-768
Cow position:
Alignm length: 512
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 456, 212

Conread position: 268-763
Cow position:
Alignm length: 497
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 160

Conread position: 268-767
Cow position:
Alignm length: 503
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 221

Conread position: 268-768
Cow position:
Alignm length: 501
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 268-768
Cow position:
Alignm length: 502
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 32

Conread position: 268-768
Cow position:
Alignm length: 501
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 459, 0

Conread position: 269-544
Cow position:
Alignm length: 277
Alignm identity: 185
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 193, 236

Conread position: 269-615
Cow position:
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 0

Conread position: 269-757
Cow position:
Alignm length: 490
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 16

Conread position: 269-764
Cow position:
Alignm length: 499
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 455, 419

Conread position: 270-758
Cow position:
Alignm length: 490
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 26

Conread position: 271-684
Cow position:
Alignm length: 414
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 0

Conread position: 271-713
Cow position:
Alignm length: 443
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 271-745
Cow position:
Alignm length: 475
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 271-754
Cow position:
Alignm length: 484
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 271-761
Cow position:
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 271-767
Cow position:
Alignm length: 498
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 73

Conread position: 271-768
Cow position:
Alignm length: 498
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 271-768
Cow position:
Alignm length: 498
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 275-685
Cow position:
Alignm length: 415
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 10

Conread position: 280-768
Cow position:
Alignm length: 489
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 309-767
Cow position:
Alignm length: 468
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 77

Conread position: 319-768
Cow position:
Alignm length: 450
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 334-752
Cow position:
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 300

Conread position: 334-768
Cow position:
Alignm length: 436
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 117

Conread position: 337-767
Cow position:
Alignm length: 431
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 345-628
Cow position:
Alignm length: 286
Alignm identity: 187
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 201, 252

Conread position: 348-761
Cow position:
Alignm length: 417
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 375

Conread position: 353-747
Cow position:
Alignm length: 398
Alignm identity: 250
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 330, 149

Conread position: 360-752
Cow position:
Alignm length: 395
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 108

Conread position: 364-768
Cow position:
Alignm length: 405
Alignm identity: 257
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 382-752
Cow position:
Alignm length: 373
Alignm identity: 243
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 81, 88

Conread position: 424-766
Cow position:
Alignm length: 344
Alignm identity: 230
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 244, 29

Conread position: 432-766
Cow position:
Alignm length: 335
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 439-767
Cow position:
Alignm length: 331
Alignm identity: 219
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 149, 159

Conread position: 445-763
Cow position:
Alignm length: 322
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 7

Conread position: 517-768
Cow position:
Alignm length: 252
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 529-768
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 22, 12

Show alignments to all cow chromosomes.