Cow genome map
| Conread name: | Ss1.1-rpgl10_f12.5 |
| Conread position: | 229-760 |
| Cow position: | chr24:17070516-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 229-763 |
| Cow position: | chr24:17036321-17035787 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 229-766 |
| Cow position: | chr24:17035481-17034945 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 229-767 |
| Cow position: | chr24:17035733-17035195 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 229-768 |
| Cow position: | chr24:17036237-17035698 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 230-768 |
| Cow position: | chr24:17035564-17035026 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 252 |
| Conread position: | 239-441 |
| Cow position: | chr24:17013315-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 239-767 |
| Cow position: | chr24:17078362-17077834 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 240-682 |
| Cow position: | chr24:17070611-17071053 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 252-767 |
| Cow position: | chr24:17070371-17070886 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 254-767 |
| Cow position: | chr24:17036630-17036119 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 49 |
| Conread position: | 255-469 |
| Cow position: | chr24:16986429-16986643 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 255-618 |
| Cow position: | chr24:17013163-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 227 |
| Conread position: | 257-604 |
| Cow position: | chr24:17070712-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 257-755 |
| Cow position: | chr24:17035621-17035123 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 257-761 |
| Cow position: | chr24:17078092-17077588 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 15 |
| Conread position: | 257-766 |
| Cow position: | chr24:17078008-17077499 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 142 |
| Conread position: | 257-767 |
| Cow position: | chr24:17035873-17035363 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 257-767 |
| Cow position: | chr24:17036041-17035531 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 210 |
| Conread position: | 257-767 |
| Cow position: | chr24:17036545-17036035 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 257-768 |
| Cow position: | chr24:17035957-17035446 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 126 |
| Conread position: | 257-768 |
| Cow position: | chr24:17036125-17035614 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 294 |
| Conread position: | 259-768 |
| Cow position: | chr24:17036375-17035866 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-768 |
| Cow position: | chr24:17078249-17077749 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 383 |
| Conread position: | 271-768 |
| Cow position: | chr24:17036447-17035950 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 277-761 |
| Cow position: | chr24:17070480-17070964 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-767 |
| Cow position: | chr24:17078153-17077666 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 287 |
| Conread position: | 310-767 |
| Cow position: | chr24:17035736-17035279 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 307 |
| Conread position: | 322-553 |
| Cow position: | chr24:16986412-16986643 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 137, 130 |
| Conread position: | 323-682 |
| Cow position: | chr24:17013147-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 244 |
| Conread position: | 404-763 |
| Cow position: | chr24:17078365-17078006 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 406-766 |
| Cow position: | chr24:17013146-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 422-648 |
| Cow position: | chr24:16986428-16986654 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 502-768 |
| Cow position: | chr24:17036551-17036286 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 503-719 |
| Cow position: | chr24:16986425-16986641 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 507-767 |
| Cow position: | chr24:17013165-17013423 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 523-768 |
| Cow position: | chr24:17070390-17070635 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 24 |
Show alignments to all cow chromosomes.