Cow genome map

Conread name: Ss1.1-rpgl10_f12.5

Conread position: 180-684
Cow position:
Alignm length: 506
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 438, 448

Conread position: 201-528
Cow position:
Alignm length: 331
Alignm identity: 222
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 8, 191

Conread position: 201-768
Cow position:
Alignm length: 568
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 212-768
Cow position:
Alignm length: 558
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 60

Conread position: 223-629
Cow position:
Alignm length: 412
Alignm identity: 262
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 177, 121

Conread position: 232-766
Cow position:
Alignm length: 535
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 233-629
Cow position:
Alignm length: 400
Alignm identity: 259
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 246, 240

Conread position: 233-670
Cow position:
Alignm length: 438
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 234-752
Cow position:
Alignm length: 519
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 237-768
Cow position:
Alignm length: 533
Alignm identity: 314
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 359, 160

Conread position: 239-768
Cow position:
Alignm length: 530
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 242-768
Cow position:
Alignm length: 534
Alignm identity: 333
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 76, 72

Conread position: 247-754
Cow position:
Alignm length: 514
Alignm identity: 322
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 198, 181

Conread position: 251-768
Cow position:
Alignm length: 523
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 212

Conread position: 252-551
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 266, 0

Conread position: 252-664
Cow position:
Alignm length: 416
Alignm identity: 248
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 49

Conread position: 252-719
Cow position:
Alignm length: 469
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 41

Conread position: 252-755
Cow position:
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 252-767
Cow position:
Alignm length: 517
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 463, 479

Conread position: 253-617
Cow position:
Alignm length: 365
Alignm identity: 235
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 253-684
Cow position:
Alignm length: 432
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 253-768
Cow position:
Alignm length: 516
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 253-768
Cow position:
Alignm length: 518
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 15

Conread position: 257-479
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 28, 43

Conread position: 257-479
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 146, 140

Conread position: 257-481
Cow position:
Alignm length: 227
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 217, 0

Conread position: 257-629
Cow position:
Alignm length: 374
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 0

Conread position: 257-717
Cow position:
Alignm length: 469
Alignm identity: 284
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 146, 140

Conread position: 257-719
Cow position:
Alignm length: 467
Alignm identity: 291
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 157, 140

Conread position: 257-719
Cow position:
Alignm length: 468
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 140

Conread position: 257-748
Cow position:
Alignm length: 494
Alignm identity: 302
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 53

Conread position: 257-768
Cow position:
Alignm length: 514
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 384

Conread position: 257-768
Cow position:
Alignm length: 512
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 257-768
Cow position:
Alignm length: 512
Alignm identity: 297
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 135, 0

Conread position: 257-768
Cow position:
Alignm length: 512
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 257-768
Cow position:
Alignm length: 512
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 258-768
Cow position:
Alignm length: 511
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 259-632
Cow position:
Alignm length: 376
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 193

Conread position: 268-573
Cow position:
Alignm length: 307
Alignm identity: 208
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 247, 0

Conread position: 268-608
Cow position:
Alignm length: 344
Alignm identity: 224
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 135, 129

Conread position: 268-763
Cow position:
Alignm length: 497
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 460, 442

Conread position: 268-767
Cow position:
Alignm length: 500
Alignm identity: 315
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 32, 0

Conread position: 268-767
Cow position:
Alignm length: 508
Alignm identity: 312
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 219, 212

Conread position: 269-556
Cow position:
Alignm length: 288
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 269-610
Cow position:
Alignm length: 342
Alignm identity: 219
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 269-768
Cow position:
Alignm length: 500
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 271-766
Cow position:
Alignm length: 498
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 10

Conread position: 274-768
Cow position:
Alignm length: 495
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 275-692
Cow position:
Alignm length: 419
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 197

Conread position: 275-768
Cow position:
Alignm length: 495
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 35

Conread position: 275-768
Cow position:
Alignm length: 495
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 456, 246

Conread position: 276-768
Cow position:
Alignm length: 497
Alignm identity: 308
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 121, 129

Conread position: 291-768
Cow position:
Alignm length: 479
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 94

Conread position: 304-768
Cow position:
Alignm length: 466
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 310-742
Cow position:
Alignm length: 442
Alignm identity: 275
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 45

Conread position: 319-621
Cow position:
Alignm length: 303
Alignm identity: 188
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 227, 0

Conread position: 319-767
Cow position:
Alignm length: 449
Alignm identity: 293
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 319-768
Cow position:
Alignm length: 451
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 158

Conread position: 336-719
Cow position:
Alignm length: 386
Alignm identity: 251
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 5, 0

Conread position: 339-767
Cow position:
Alignm length: 429
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 382-768
Cow position:
Alignm length: 394
Alignm identity: 259
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 90, 54

Conread position: 418-761
Cow position:
Alignm length: 345
Alignm identity: 222
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 104

Conread position: 424-765
Cow position:
Alignm length: 343
Alignm identity: 222
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 28

Conread position: 504-768
Cow position:
Alignm length: 269
Alignm identity: 175
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 5, 66

Conread position: 517-768
Cow position:
Alignm length: 252
Alignm identity: 163
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.