Cow genome map

Conread name: Ss1.1-rpgl10_f12.5

Conread position: 64-763
Cow position:
Alignm length: 702
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 121

Conread position: 72-767
Cow position:
Alignm length: 700
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 10

Conread position: 148-561
Cow position:
Alignm length: 417
Alignm identity: 252
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 88

Conread position: 170-768
Cow position:
Alignm length: 599
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 229-531
Cow position:
Alignm length: 305
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 150, 118

Conread position: 229-754
Cow position:
Alignm length: 527
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 161

Conread position: 229-768
Cow position:
Alignm length: 541
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 154

Conread position: 231-768
Cow position:
Alignm length: 545
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 41

Conread position: 232-633
Cow position:
Alignm length: 404
Alignm identity: 248
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 328, 295

Conread position: 232-761
Cow position:
Alignm length: 532
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 231

Conread position: 232-767
Cow position:
Alignm length: 536
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 232-767
Cow position:
Alignm length: 544
Alignm identity: 340
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 66, 92

Conread position: 234-763
Cow position:
Alignm length: 536
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 137

Conread position: 234-767
Cow position:
Alignm length: 534
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 234-767
Cow position:
Alignm length: 535
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 231

Conread position: 234-768
Cow position:
Alignm length: 544
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 37

Conread position: 236-767
Cow position:
Alignm length: 533
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 327

Conread position: 239-513
Cow position:
Alignm length: 276
Alignm identity: 185
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 233, 192

Conread position: 239-768
Cow position:
Alignm length: 531
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 240

Conread position: 239-768
Cow position:
Alignm length: 531
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 322

Conread position: 240-768
Cow position:
Alignm length: 531
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 230

Conread position: 245-464
Cow position:
Alignm length: 223
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 181, 198

Conread position: 245-586
Cow position:
Alignm length: 342
Alignm identity: 225
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 247-768
Cow position:
Alignm length: 525
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 249-757
Cow position:
Alignm length: 510
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 12

Conread position: 250-768
Cow position:
Alignm length: 524
Alignm identity: 326
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 70, 21

Conread position: 252-547
Cow position:
Alignm length: 299
Alignm identity: 200
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 152, 139

Conread position: 252-551
Cow position:
Alignm length: 304
Alignm identity: 208
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 140, 152

Conread position: 252-616
Cow position:
Alignm length: 365
Alignm identity: 227
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 252-630
Cow position:
Alignm length: 380
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 84

Conread position: 252-767
Cow position:
Alignm length: 523
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 130

Conread position: 252-768
Cow position:
Alignm length: 517
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 253-754
Cow position:
Alignm length: 504
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 18

Conread position: 253-767
Cow position:
Alignm length: 520
Alignm identity: 323
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 152, 15

Conread position: 253-768
Cow position:
Alignm length: 523
Alignm identity: 328
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 56, 51

Conread position: 253-768
Cow position:
Alignm length: 525
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 18

Conread position: 253-768
Cow position:
Alignm length: 516
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 255-767
Cow position:
Alignm length: 518
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 50

Conread position: 255-767
Cow position:
Alignm length: 513
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 256-767
Cow position:
Alignm length: 516
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 18

Conread position: 257-558
Cow position:
Alignm length: 303
Alignm identity: 202
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 138, 147

Conread position: 257-681
Cow position:
Alignm length: 425
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 257-692
Cow position:
Alignm length: 442
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 53

Conread position: 257-713
Cow position:
Alignm length: 464
Alignm identity: 298
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 55

Conread position: 257-716
Cow position:
Alignm length: 465
Alignm identity: 290
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 55

Conread position: 257-721
Cow position:
Alignm length: 470
Alignm identity: 297
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 64, 43

Conread position: 257-763
Cow position:
Alignm length: 507
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 257-766
Cow position:
Alignm length: 510
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 257-766
Cow position:
Alignm length: 511
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 241

Conread position: 257-766
Cow position:
Alignm length: 519
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 45

Conread position: 257-767
Cow position:
Alignm length: 511
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 257-767
Cow position:
Alignm length: 516
Alignm identity: 315
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 139, 148

Conread position: 257-767
Cow position:
Alignm length: 514
Alignm identity: 311
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 147, 134

Conread position: 257-767
Cow position:
Alignm length: 519
Alignm identity: 324
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 147, 132

Conread position: 257-768
Cow position:
Alignm length: 512
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 507, 0

Conread position: 257-768
Cow position:
Alignm length: 516
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 294

Conread position: 257-768
Cow position:
Alignm length: 516
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 136

Conread position: 257-768
Cow position:
Alignm length: 512
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 257-768
Cow position:
Alignm length: 513
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 463, 470

Conread position: 258-767
Cow position:
Alignm length: 514
Alignm identity: 320
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 62, 52

Conread position: 259-763
Cow position:
Alignm length: 506
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 456, 432

Conread position: 259-768
Cow position:
Alignm length: 511
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 131

Conread position: 261-768
Cow position:
Alignm length: 514
Alignm identity: 321
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 143, 130

Conread position: 266-768
Cow position:
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 268-767
Cow position:
Alignm length: 501
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 458

Conread position: 268-767
Cow position:
Alignm length: 502
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 359

Conread position: 269-714
Cow position:
Alignm length: 449
Alignm identity: 274
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 176, 93

Conread position: 269-720
Cow position:
Alignm length: 453
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 41

Conread position: 269-768
Cow position:
Alignm length: 505
Alignm identity: 316
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 56, 33

Conread position: 270-768
Cow position:
Alignm length: 501
Alignm identity: 300
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 39, 32

Conread position: 271-768
Cow position:
Alignm length: 498
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 273-720
Cow position:
Alignm length: 449
Alignm identity: 275
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 277, 285

Conread position: 288-768
Cow position:
Alignm length: 485
Alignm identity: 306
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 31, 17

Conread position: 311-768
Cow position:
Alignm length: 460
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 77

Conread position: 321-768
Cow position:
Alignm length: 449
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 199

Conread position: 325-763
Cow position:
Alignm length: 440
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 54

Conread position: 336-768
Cow position:
Alignm length: 438
Alignm identity: 266
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 44

Conread position: 403-701
Cow position:
Alignm length: 305
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 65

Conread position: 421-768
Cow position:
Alignm length: 354
Alignm identity: 234
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 50

Conread position: 439-768
Cow position:
Alignm length: 330
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 482-768
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 69, 79

Conread position: 516-768
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.