Cow genome map
Conread name: | Ss1.1-rpgl10_f12.5 |
Conread position: | 61-757 |
Cow position: | chr8:46816690-46817386 (view UCSC Genome Browser custom track) |
Alignm length: | 700 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 22 |
Conread position: | 99-768 |
Cow position: | chr8:45201029-45201698 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 57 |
Conread position: | 189-768 |
Cow position: | chr8:48407695-48407118 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 24 |
Conread position: | 224-547 |
Cow position: | chr8:55581378-55581701 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 214 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 80, 72 |
Conread position: | 228-758 |
Cow position: | chr8:45201410-45201940 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 176 |
Conread position: | 229-766 |
Cow position: | chr8:46816438-46816975 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 488, 497 |
Conread position: | 229-767 |
Cow position: | chr8:46816186-46816724 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 229-767 |
Cow position: | chr8:46816690-46817228 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 265 |
Conread position: | 229-768 |
Cow position: | chr8:55581047-55581586 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 231-767 |
Cow position: | chr8:46816524-46817060 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 289 |
Conread position: | 232-668 |
Cow position: | chr8:6958020-6957587 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 269 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 303, 233 |
Conread position: | 232-682 |
Cow position: | chr8:45201750-45202191 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 280 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 297, 234 |
Conread position: | 232-707 |
Cow position: | chr8:55581218-55581693 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 232-763 |
Cow position: | chr8:48407318-48406787 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 234-510 |
Cow position: | chr8:46817115-46817391 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 180 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 234-767 |
Cow position: | chr8:46816779-46817312 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 156 |
Conread position: | 234-768 |
Cow position: | chr8:45201248-45201782 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 238-766 |
Cow position: | chr8:46816027-46816555 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 59 |
Conread position: | 239-768 |
Cow position: | chr8:45201001-45201530 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 151 |
Conread position: | 239-768 |
Cow position: | chr8:46816364-46816893 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 165 |
Conread position: | 253-767 |
Cow position: | chr8:55580820-55581333 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 254-768 |
Cow position: | chr8:55580735-55581250 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 99 |
Conread position: | 256-681 |
Cow position: | chr8:48406705-48406281 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 12 |
Conread position: | 257-751 |
Cow position: | chr8:48407209-48406716 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 300, 304 |
Conread position: | 257-758 |
Cow position: | chr8:55580991-55581492 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 257-766 |
Cow position: | chr8:45201691-45202191 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 326 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 140, 147 |
Conread position: | 257-767 |
Cow position: | chr8:48407545-48407035 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 364, 372 |
Conread position: | 257-768 |
Cow position: | chr8:46816298-46816809 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 257-768 |
Cow position: | chr8:48407041-48406530 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 210 |
Conread position: | 259-513 |
Cow position: | chr8:55581497-55581751 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 171 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 228, 221 |
Conread position: | 259-623 |
Cow position: | chr8:45201609-45201973 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 266-768 |
Cow position: | chr8:45200776-45201278 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 19 |
Conread position: | 268-767 |
Cow position: | chr8:48406862-48406363 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 120 |
Conread position: | 268-768 |
Cow position: | chr8:45201366-45201866 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 136 |
Conread position: | 268-768 |
Cow position: | chr8:46815886-46816389 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 200 |
Conread position: | 271-669 |
Cow position: | chr8:55581341-55581739 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 262 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 126, 130 |
Conread position: | 271-764 |
Cow position: | chr8:55581173-55581666 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 287 |
Conread position: | 271-767 |
Cow position: | chr8:48407447-48406951 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 281, 297 |
Conread position: | 271-768 |
Cow position: | chr8:45200949-45201446 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 65 |
Conread position: | 271-768 |
Cow position: | chr8:46816648-46817145 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 312, 308 |
Conread position: | 271-768 |
Cow position: | chr8:48406943-48406446 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 40 |
Conread position: | 271-768 |
Cow position: | chr8:48407363-48406866 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 271-768 |
Cow position: | chr8:55580921-55581418 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 276-767 |
Cow position: | chr8:46815651-46816136 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 296 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 111, 122 |
Conread position: | 276-768 |
Cow position: | chr8:46815981-46816473 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 105 |
Conread position: | 277-624 |
Cow position: | chr8:6958059-6957713 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 272, 0 |
Conread position: | 285-753 |
Cow position: | chr8:48406760-48406293 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 21 |
Conread position: | 304-767 |
Cow position: | chr8:45200898-45201361 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 246, 254 |
Conread position: | 444-768 |
Cow position: | chr8:6958060-6957737 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 211 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 273, 0 |
Show alignments to all cow chromosomes.