Cow genome map

Conread name: Ss1.1-rpgl10_f12.5

Conread position: 61-757
Cow position: chr8:46816690-46817386 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 22

Conread position: 99-768
Cow position: chr8:45201029-45201698 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 57

Conread position: 189-768
Cow position: chr8:48407695-48407118 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 24

Conread position: 224-547
Cow position: chr8:55581378-55581701 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 214
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 80, 72

Conread position: 228-758
Cow position: chr8:45201410-45201940 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 176

Conread position: 229-766
Cow position: chr8:46816438-46816975 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 488, 497

Conread position: 229-767
Cow position: chr8:46816186-46816724 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 229-767
Cow position: chr8:46816690-46817228 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 265

Conread position: 229-768
Cow position: chr8:55581047-55581586 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 231-767
Cow position: chr8:46816524-46817060 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 289

Conread position: 232-668
Cow position: chr8:6958020-6957587 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 269
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 303, 233

Conread position: 232-682
Cow position: chr8:45201750-45202191 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 280
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 297, 234

Conread position: 232-707
Cow position: chr8:55581218-55581693 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 232-763
Cow position: chr8:48407318-48406787 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 234-510
Cow position: chr8:46817115-46817391 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 180
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 234-767
Cow position: chr8:46816779-46817312 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 156

Conread position: 234-768
Cow position: chr8:45201248-45201782 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 238-766
Cow position: chr8:46816027-46816555 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 59

Conread position: 239-768
Cow position: chr8:45201001-45201530 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 151

Conread position: 239-768
Cow position: chr8:46816364-46816893 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 165

Conread position: 253-767
Cow position: chr8:55580820-55581333 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 254-768
Cow position: chr8:55580735-55581250 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 99

Conread position: 256-681
Cow position: chr8:48406705-48406281 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 12

Conread position: 257-751
Cow position: chr8:48407209-48406716 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 304

Conread position: 257-758
Cow position: chr8:55580991-55581492 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 257-766
Cow position: chr8:45201691-45202191 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 326
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 140, 147

Conread position: 257-767
Cow position: chr8:48407545-48407035 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 372

Conread position: 257-768
Cow position: chr8:46816298-46816809 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 257-768
Cow position: chr8:48407041-48406530 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 210

Conread position: 259-513
Cow position: chr8:55581497-55581751 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 228, 221

Conread position: 259-623
Cow position: chr8:45201609-45201973 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 266-768
Cow position: chr8:45200776-45201278 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 19

Conread position: 268-767
Cow position: chr8:48406862-48406363 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 120

Conread position: 268-768
Cow position: chr8:45201366-45201866 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 136

Conread position: 268-768
Cow position: chr8:46815886-46816389 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 200

Conread position: 271-669
Cow position: chr8:55581341-55581739 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 130

Conread position: 271-764
Cow position: chr8:55581173-55581666 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 287

Conread position: 271-767
Cow position: chr8:48407447-48406951 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 297

Conread position: 271-768
Cow position: chr8:45200949-45201446 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 65

Conread position: 271-768
Cow position: chr8:46816648-46817145 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 308

Conread position: 271-768
Cow position: chr8:48406943-48406446 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 40

Conread position: 271-768
Cow position: chr8:48407363-48406866 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 271-768
Cow position: chr8:55580921-55581418 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 276-767
Cow position: chr8:46815651-46816136 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 296
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 122

Conread position: 276-768
Cow position: chr8:46815981-46816473 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 105

Conread position: 277-624
Cow position: chr8:6958059-6957713 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 0

Conread position: 285-753
Cow position: chr8:48406760-48406293 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 21

Conread position: 304-767
Cow position: chr8:45200898-45201361 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 254

Conread position: 444-768
Cow position: chr8:6958060-6957737 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 211
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 273, 0

Show alignments to all cow chromosomes.