Cow genome map
| Conread name: | Ss1.1-rpgl13_o20.5 |
| Conread position: | 1-226 |
| Cow position: | chr14:25794406-25794179 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 25, 111 |
| Conread position: | 1-249 |
| Cow position: | chr14:25783616-25783866 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-249 |
| Cow position: | chr14:25795162-25794912 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 105 |
| Conread position: | 1-264 |
| Cow position: | chr14:25783448-25783713 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-264 |
| Cow position: | chr14:25784204-25784469 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-265 |
| Cow position: | chr14:25783784-25784049 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 262 |
| Conread position: | 1-270 |
| Cow position: | chr14:25784372-25784643 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-272 |
| Cow position: | chr14:25783868-25784141 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-273 |
| Cow position: | chr14:25783700-25783974 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-273 |
| Cow position: | chr14:25784036-25784310 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 37, 190 |
| Conread position: | 2-285 |
| Cow position: | chr14:25836740-25837026 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 6-190 |
| Cow position: | chr14:25836660-25836845 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-249 |
| Cow position: | chr14:25795409-25795164 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 6-264 |
| Cow position: | chr14:25783369-25783629 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 6-270 |
| Cow position: | chr14:25783957-25784223 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 6-270 |
| Cow position: | chr14:25784125-25784391 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 104 |
| Conread position: | 6-270 |
| Cow position: | chr14:25784461-25784727 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 104 |
| Conread position: | 6-270 |
| Cow position: | chr14:25795325-25795059 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 6-272 |
| Cow position: | chr14:25783537-25783805 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 6-272 |
| Cow position: | chr14:25836492-25836760 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-273 |
| Cow position: | chr14:25794821-25794552 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 25, 116 |
| Conread position: | 6-328 |
| Cow position: | chr14:25794989-25794662 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 111 |
| Conread position: | 7-257 |
| Cow position: | chr14:25836241-25836493 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 21, 124 |
| Conread position: | 7-264 |
| Cow position: | chr14:3080148-3079889 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-264 |
| Cow position: | chr14:3155924-3156183 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 124 |
| Conread position: | 7-271 |
| Cow position: | chr14:3127744-3127478 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-272 |
| Cow position: | chr14:681005-681272 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 116 |
| Conread position: | 7-272 |
| Cow position: | chr14:3127912-3127645 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 7-272 |
| Cow position: | chr14:3155435-3155702 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 195 |
| Conread position: | 7-272 |
| Cow position: | chr14:3156176-3156443 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 195 |
| Conread position: | 7-272 |
| Cow position: | chr14:25836577-25836844 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 196 |
| Conread position: | 7-274 |
| Cow position: | chr14:25794904-25794635 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 7-281 |
| Cow position: | chr14:3156092-3156369 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 7-326 |
| Cow position: | chr14:25877605-25877928 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 121 |
| Conread position: | 13-272 |
| Cow position: | chr14:3156014-3156275 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-270 |
| Cow position: | chr14:25783312-25783551 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 153, 165 |
| Conread position: | 32-282 |
| Cow position: | chr14:25795466-25795214 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 169, 158 |
| Conread position: | 50-249 |
| Cow position: | chr14:447575-447775 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 56-270 |
| Cow position: | chr14:25794434-25794218 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 101, 139 |
| Conread position: | 68-271 |
| Cow position: | chr14:25794590-25794386 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 133, 145 |
Show alignments to all cow chromosomes.