Cow genome map

Conread name: Ss1.1-rpgl13_o20.5

Conread position: 1-230
Cow position: chr22:12499729-12499959 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 213

Conread position: 1-249
Cow position: chr22:12431805-12431555 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 198

Conread position: 1-270
Cow position: chr22:12399573-12399302 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 105

Conread position: 1-272
Cow position: chr22:14429749-14430022 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 0

Conread position: 1-272
Cow position: chr22:14441979-14442252 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 203

Conread position: 1-272
Cow position: chr22:14468078-14468351 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 30

Conread position: 5-307
Cow position: chr22:12430961-12430654 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 6-226
Cow position: chr22:12398980-12398759 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 6-226
Cow position: chr22:12458416-12458195 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 121

Conread position: 6-229
Cow position: chr22:11641218-11641442 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 147
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 6-230
Cow position: chr22:12385138-12384913 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 6-230
Cow position: chr22:12475525-12475300 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 121

Conread position: 6-265
Cow position: chr22:12499482-12499742 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 22, 257

Conread position: 6-270
Cow position: chr22:12399232-12398966 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 6-271
Cow position: chr22:12399148-12398881 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 6-271
Cow position: chr22:12399898-12399637 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 59

Conread position: 6-271
Cow position: chr22:12475945-12475678 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 6-272
Cow position: chr22:11640798-11641066 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 176
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 119

Conread position: 6-272
Cow position: chr22:12385390-12385122 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 6-272
Cow position: chr22:12399820-12399552 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 22, 100

Conread position: 6-272
Cow position: chr22:12431716-12431448 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 6-272
Cow position: chr22:12476113-12475845 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 6-272
Cow position: chr22:12476365-12476097 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 125

Conread position: 6-272
Cow position: chr22:14429670-14429938 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 105

Conread position: 6-272
Cow position: chr22:14430090-14430358 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 110

Conread position: 6-273
Cow position: chr22:12385476-12385205 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 6-278
Cow position: chr22:12399652-12399378 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 25, 19

Conread position: 6-281
Cow position: chr22:12498894-12499172 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 125

Conread position: 6-283
Cow position: chr22:12385644-12385362 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 195

Conread position: 6-285
Cow position: chr22:12475861-12475579 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 6-285
Cow position: chr22:12499398-12499680 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 6-299
Cow position: chr22:11640966-11641262 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 110

Conread position: 6-302
Cow position: chr22:12399064-12398765 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 26, 292

Conread position: 6-307
Cow position: chr22:12399316-12399010 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 7-228
Cow position: chr22:12418918-12418696 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 21, 112

Conread position: 7-228
Cow position: chr22:12457995-12457773 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 120

Conread position: 7-257
Cow position: chr22:12399735-12399483 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 100

Conread position: 7-257
Cow position: chr22:12419271-12419020 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 7-264
Cow position: chr22:12458079-12457820 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 105

Conread position: 7-265
Cow position: chr22:12431211-12430951 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 31

Conread position: 7-265
Cow position: chr22:12475776-12475517 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 21, 256

Conread position: 7-268
Cow position: chr22:12498979-12499241 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 30, 120

Conread position: 7-270
Cow position: chr22:12431043-12430778 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 114

Conread position: 7-270
Cow position: chr22:12431127-12430861 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 22, 185

Conread position: 7-270
Cow position: chr22:12432219-12431954 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 124

Conread position: 7-270
Cow position: chr22:12432387-12432123 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 186

Conread position: 7-270
Cow position: chr22:12458499-12458234 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 7-270
Cow position: chr22:14468000-14468265 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 111

Conread position: 7-271
Cow position: chr22:11640883-11641149 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 39

Conread position: 7-271
Cow position: chr22:12476196-12475930 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 174
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 21, 120

Conread position: 7-271
Cow position: chr22:12499063-12499329 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 21, 120

Conread position: 7-272
Cow position: chr22:12385221-12384954 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 7-272
Cow position: chr22:12399399-12399132 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 7-272
Cow position: chr22:12419002-12418735 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 7-272
Cow position: chr22:12431379-12431112 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 7-272
Cow position: chr22:12431463-12431196 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 173
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 21, 117

Conread position: 7-272
Cow position: chr22:12458331-12458064 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 7-272
Cow position: chr22:12475608-12475341 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 0

Conread position: 7-272
Cow position: chr22:12476280-12476013 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 120

Conread position: 7-272
Cow position: chr22:12499315-12499582 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 7-272
Cow position: chr22:14429923-14430190 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 7-274
Cow position: chr22:11701378-11701647 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 21, 30

Conread position: 7-281
Cow position: chr22:12458163-12457886 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 115

Conread position: 7-282
Cow position: chr22:12475692-12475414 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 7-301
Cow position: chr22:12499567-12499864 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 26-249
Cow position: chr22:12432451-12432227 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 211, 0

Conread position: 29-270
Cow position: chr22:12399460-12399218 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 203, 0

Conread position: 50-272
Cow position: chr22:12458623-12458400 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 181, 0

Conread position: 57-281
Cow position: chr22:12475977-12475751 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 175, 0

Show alignments to all cow chromosomes.