Cow genome map

Conread name: Ss1.1-rpgl13_o20.5

Conread position: 1-226
Cow position: chr23:24626495-24626721 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 1-270
Cow position: chr23:25626133-25626404 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 1-272
Cow position: chr23:24522465-24522192 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 176
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 5-270
Cow position: chr23:24639323-24639590 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 73

Conread position: 5-272
Cow position: chr23:24560783-24560514 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 6-230
Cow position: chr23:24536021-24535796 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 119

Conread position: 6-248
Cow position: chr23:25723935-25723692 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 6-269
Cow position: chr23:24654141-24654406 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 6-270
Cow position: chr23:24547306-24547040 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 7

Conread position: 6-270
Cow position: chr23:24639240-24639506 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 187

Conread position: 6-270
Cow position: chr23:25698632-25698366 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 6-270
Cow position: chr23:25724103-25723837 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 19, 7

Conread position: 6-272
Cow position: chr23:24535937-24535669 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 35

Conread position: 6-272
Cow position: chr23:24560866-24560598 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 7-226
Cow position: chr23:24535684-24535464 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 7-228
Cow position: chr23:25626724-25626946 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 7-243
Cow position: chr23:24535768-24535530 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 7-253
Cow position: chr23:24546885-24546637 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 7-263
Cow position: chr23:24654058-24654316 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 7-266
Cow position: chr23:24521953-24521693 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 168
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 100

Conread position: 7-266
Cow position: chr23:24560361-24560102 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 24, 233

Conread position: 7-266
Cow position: chr23:25626223-25626483 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 22, 256

Conread position: 7-270
Cow position: chr23:24560445-24560180 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 7-270
Cow position: chr23:25660344-25660610 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 7-271
Cow position: chr23:24546969-24546703 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 21, 0

Conread position: 7-271
Cow position: chr23:24639409-24639675 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 171
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 7-271
Cow position: chr23:24639661-24639927 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 7-271
Cow position: chr23:24639829-24640095 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 21, 118

Conread position: 7-272
Cow position: chr23:24560613-24560346 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 0

Conread position: 7-272
Cow position: chr23:24626417-24626684 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 7-272
Cow position: chr23:24639493-24639760 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 7-272
Cow position: chr23:24639577-24639844 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 21, 181

Conread position: 7-272
Cow position: chr23:25626475-25626739 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 61

Conread position: 7-272
Cow position: chr23:25660428-25660695 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 181

Conread position: 7-273
Cow position: chr23:24560529-24560261 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 7-276
Cow position: chr23:24560697-24560426 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 23, 0

Conread position: 7-282
Cow position: chr23:24547221-24546943 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 22, 0

Conread position: 7-282
Cow position: chr23:25724018-25723740 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 180
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 190

Conread position: 7-285
Cow position: chr23:24626333-24626614 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 7-299
Cow position: chr23:24639745-24640040 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 40

Conread position: 7-306
Cow position: chr23:24522624-24522323 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 31

Conread position: 7-338
Cow position: chr23:24547137-24546801 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 292

Conread position: 50-265
Cow position: chr23:24639201-24639417 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 184, 0

Conread position: 60-272
Cow position: chr23:24626303-24626516 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 180, 0

Conread position: 66-276
Cow position: chr23:24522814-24522605 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 140
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 171, 24

Conread position: 74-272
Cow position: chr23:24654042-24654241 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 158, 0

Conread position: 81-270
Cow position: chr23:24536029-24535839 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 151, 0

Conread position: 81-272
Cow position: chr23:24547314-24547122 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 156, 0

Conread position: 81-272
Cow position: chr23:24560874-24560682 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 147, 0

Show alignments to all cow chromosomes.