Cow genome map
| Conread name: | Ss1.1-rpgl13_o20.5 |
| Conread position: | 6-265 |
| Cow position: | chr24:17013187-17013448 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 6-270 |
| Cow position: | chr24:17035935-17035669 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 189 |
| Conread position: | 6-270 |
| Cow position: | chr24:17070734-17071000 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-272 |
| Cow position: | chr24:17036355-17036087 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 22, 173 |
| Conread position: | 6-272 |
| Cow position: | chr24:17036604-17036339 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 8, 55 |
| Conread position: | 6-273 |
| Cow position: | chr24:17070650-17070919 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 22, 187 |
| Conread position: | 6-282 |
| Cow position: | chr24:17078070-17077791 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 7-227 |
| Cow position: | chr24:17077817-17077596 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 119 |
| Conread position: | 7-270 |
| Cow position: | chr24:17035850-17035585 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 7-270 |
| Cow position: | chr24:17036522-17036257 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-276 |
| Cow position: | chr24:17077901-17077630 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 7-278 |
| Cow position: | chr24:17070567-17070840 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 21, 120 |
| Conread position: | 7-280 |
| Cow position: | chr24:17036102-17035827 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-282 |
| Cow position: | chr24:17013272-17013550 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 21, 29 |
| Conread position: | 7-301 |
| Cow position: | chr24:17077985-17077688 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 21, 119 |
| Conread position: | 7-328 |
| Cow position: | chr24:17070483-17070809 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-345 |
| Cow position: | chr24:17035262-17034920 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 22, 310 |
| Conread position: | 13-230 |
| Cow position: | chr24:17035760-17035542 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 14-273 |
| Cow position: | chr24:17036180-17035918 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 19-230 |
| Cow position: | chr24:17036006-17035794 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 9, 174 |
| Conread position: | 19-249 |
| Cow position: | chr24:17036426-17036194 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 19-272 |
| Cow position: | chr24:17035334-17035079 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 26-272 |
| Cow position: | chr24:17035494-17035247 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 28-285 |
| Cow position: | chr24:17036248-17035989 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 70, 58 |
| Conread position: | 50-272 |
| Cow position: | chr24:17070443-17070666 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 51-285 |
| Cow position: | chr24:17035553-17035317 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 81-281 |
| Cow position: | chr24:17013179-17013381 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 133, 111 |
Show alignments to all cow chromosomes.