Cow genome map
| Conread name: | Ss1.1-rpgl13_o20.5 |
| Conread position: | 1-193 |
| Cow position: | chr3:68027110-68027303 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-249 |
| Cow position: | chr3:77351221-77350973 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 4-270 |
| Cow position: | chr3:68027029-68027297 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 5-272 |
| Cow position: | chr3:68027450-68027719 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 5-345 |
| Cow position: | chr3:62742717-62743053 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 166, 34 |
| Conread position: | 6-215 |
| Cow position: | chr3:68027535-68027745 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-229 |
| Cow position: | chr3:62721882-62721658 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-266 |
| Cow position: | chr3:62722302-62722041 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 25, 257 |
| Conread position: | 6-270 |
| Cow position: | chr3:68045792-68046058 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 23, 114 |
| Conread position: | 6-270 |
| Cow position: | chr3:68045876-68046142 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 6-272 |
| Cow position: | chr3:62722134-62721866 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-272 |
| Cow position: | chr3:62722218-62721950 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 21, 189 |
| Conread position: | 6-272 |
| Cow position: | chr3:68027199-68027467 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 6-278 |
| Cow position: | chr3:62743036-62743305 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 75 |
| Conread position: | 6-288 |
| Cow position: | chr3:68046044-68046330 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-299 |
| Cow position: | chr3:68045960-68046256 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 6-307 |
| Cow position: | chr3:68045708-68046014 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 205 |
| Conread position: | 6-327 |
| Cow position: | chr3:62722050-62721724 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 257 |
| Conread position: | 7-230 |
| Cow position: | chr3:62721797-62721573 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 7-318 |
| Cow position: | chr3:68027368-68027684 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 8-401 |
| Cow position: | chr3:77350887-77350491 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 185 |
| Conread position: | 9-331 |
| Cow position: | chr3:62743118-62743445 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 254 |
| Conread position: | 39-272 |
| Cow position: | chr3:77350942-77350705 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 45-272 |
| Cow position: | chr3:62742342-62742569 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 185, 13 |
| Conread position: | 58-272 |
| Cow position: | chr3:68027000-68027215 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 57, 63 |
| Conread position: | 68-270 |
| Cow position: | chr3:62722323-62722120 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 131, 126 |
| Conread position: | 73-272 |
| Cow position: | chr3:68045608-68045808 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 42, 48 |
Show alignments to all cow chromosomes.