Cow genome map
| Conread name: | Ss1.1-rpgl13_o20.5 |
| Conread position: | 6-229 |
| Cow position: | chr8:46816992-46817216 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 6-230 |
| Cow position: | chr8:6958057-6957832 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 6-249 |
| Cow position: | chr8:48407607-48407362 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 6-264 |
| Cow position: | chr8:46816152-46816412 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 21, 156 |
| Conread position: | 6-264 |
| Cow position: | chr8:48406683-48406423 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 6-270 |
| Cow position: | chr8:48407019-48406753 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 6-271 |
| Cow position: | chr8:46816404-46816671 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-272 |
| Cow position: | chr8:45201041-45201309 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-272 |
| Cow position: | chr8:46816572-46816840 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-272 |
| Cow position: | chr8:46816656-46816924 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 22, 157 |
| Conread position: | 6-272 |
| Cow position: | chr8:48407187-48406919 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 111 |
| Conread position: | 6-272 |
| Cow position: | chr8:48407523-48407255 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 182 |
| Conread position: | 6-273 |
| Cow position: | chr8:45201125-45201394 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 6-278 |
| Cow position: | chr8:48407103-48406829 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 19, 185 |
| Conread position: | 6-282 |
| Cow position: | chr8:46815984-46816263 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 6-282 |
| Cow position: | chr8:46816320-46816599 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-283 |
| Cow position: | chr8:55580845-55581125 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-289 |
| Cow position: | chr8:46816824-46817110 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-299 |
| Cow position: | chr8:45201293-45201589 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-299 |
| Cow position: | chr8:45201377-45201673 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-305 |
| Cow position: | chr8:46817076-46817378 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 22, 181 |
| Conread position: | 6-306 |
| Cow position: | chr8:45201209-45201514 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-307 |
| Cow position: | chr8:45200957-45201263 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 286 |
| Conread position: | 7-227 |
| Cow position: | chr8:48406514-48406293 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 193 |
| Conread position: | 7-243 |
| Cow position: | chr8:55580930-55581168 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 120 |
| Conread position: | 7-243 |
| Cow position: | chr8:55581182-55581420 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-249 |
| Cow position: | chr8:55581350-55581594 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 118 |
| Conread position: | 7-270 |
| Cow position: | chr8:55581098-55581363 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-272 |
| Cow position: | chr8:46816069-46816336 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 99 |
| Conread position: | 7-272 |
| Cow position: | chr8:46816237-46816504 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 7-272 |
| Cow position: | chr8:48407270-48407003 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 186 |
| Conread position: | 7-278 |
| Cow position: | chr8:48407438-48407165 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-281 |
| Cow position: | chr8:55581014-55581291 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 7-281 |
| Cow position: | chr8:55581434-55581711 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 7-282 |
| Cow position: | chr8:46816909-46817187 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 7-288 |
| Cow position: | chr8:45201462-45201747 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-299 |
| Cow position: | chr8:55581266-55581561 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 289 |
| Conread position: | 7-306 |
| Cow position: | chr8:46816489-46816793 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 18, 288 |
| Conread position: | 7-307 |
| Cow position: | chr8:46816741-46817046 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 21, 290 |
| Conread position: | 7-370 |
| Cow position: | chr8:45201630-45201994 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 21, 303 |
| Conread position: | 30-299 |
| Cow position: | chr8:45200898-45201169 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 121, 116 |
| Conread position: | 45-264 |
| Cow position: | chr8:48407315-48407095 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 134, 145 |
| Conread position: | 66-270 |
| Cow position: | chr8:48406706-48406501 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 87-273 |
| Cow position: | chr8:6958059-6957872 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 150, 0 |
Show alignments to all cow chromosomes.