Cow genome map
| Conread name: | Ss1.1-rpgl13_o20.5 |
| Conread position: | 4-282 |
| Cow position: | chrX:29045155-29044874 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 6-229 |
| Cow position: | chrX:25310333-25310557 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 6-229 |
| Cow position: | chrX:29044901-29044677 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-265 |
| Cow position: | chrX:25325312-25325052 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 21, 257 |
| Conread position: | 6-266 |
| Cow position: | chrX:25325732-25325471 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 257 |
| Conread position: | 6-270 |
| Cow position: | chrX:25309829-25310095 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 6-272 |
| Cow position: | chrX:25310249-25310517 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 6-272 |
| Cow position: | chrX:25324724-25324456 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 25, 29 |
| Conread position: | 6-272 |
| Cow position: | chrX:25325228-25324960 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-272 |
| Cow position: | chrX:25325480-25325212 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 22, 186 |
| Conread position: | 6-278 |
| Cow position: | chrX:25309745-25310020 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 130 |
| Conread position: | 6-278 |
| Cow position: | chrX:25325564-25325290 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 6-282 |
| Cow position: | chrX:29044985-29044706 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 6-282 |
| Cow position: | chrX:29045237-29044958 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 6-283 |
| Cow position: | chrX:25310081-25310361 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 6-284 |
| Cow position: | chrX:29045720-29045442 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 22, 274 |
| Conread position: | 6-307 |
| Cow position: | chrX:25309913-25310219 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 6-307 |
| Cow position: | chrX:25324976-25324670 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 6-307 |
| Cow position: | chrX:25325396-25325090 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 22, 289 |
| Conread position: | 6-318 |
| Cow position: | chrX:25324556-25324239 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 291 |
| Conread position: | 7-214 |
| Cow position: | chrX:29045635-29045427 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 185 |
| Conread position: | 7-249 |
| Cow position: | chrX:25310166-25310410 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 7-272 |
| Cow position: | chrX:25309998-25310265 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 207 |
| Conread position: | 7-272 |
| Cow position: | chrX:25324639-25324372 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-282 |
| Cow position: | chrX:29045068-29044790 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-302 |
| Cow position: | chrX:25324891-25324593 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 7-328 |
| Cow position: | chrX:25325143-25324817 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 21, 314 |
| Conread position: | 9-282 |
| Cow position: | chrX:29045801-29045525 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 12-270 |
| Cow position: | chrX:25309667-25309927 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 57-272 |
| Cow position: | chrX:29045350-29045137 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 176, 18 |
| Conread position: | 60-302 |
| Cow position: | chrX:25325593-25325349 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 66 |
Show alignments to all cow chromosomes.