Cow genome map
| Conread name: | Ss1.1-rpgl18_p2.5 |
| Conread position: | 326-553 |
| Cow position: | chr12:4014205-4014442 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 90, 61 |
| Conread position: | 334-662 |
| Cow position: | chr12:11836448-11836105 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 337-660 |
| Cow position: | chr12:42967193-42966872 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 344-607 |
| Cow position: | chr12:7960381-7960645 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 64 |
| Conread position: | 344-614 |
| Cow position: | chr12:9766677-9766945 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 350-662 |
| Cow position: | chr12:30590952-30590639 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 204, 15 |
| Conread position: | 351-552 |
| Cow position: | chr12:38679241-38679041 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 5, 40 |
| Conread position: | 352-607 |
| Cow position: | chr12:43782783-43783038 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 354-612 |
| Cow position: | chr12:3879777-3880048 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 357-573 |
| Cow position: | chr12:6958407-6958190 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 358-580 |
| Cow position: | chr12:39149860-39150088 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 110 |
| Conread position: | 358-612 |
| Cow position: | chr12:32051692-32051444 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 38 |
| Conread position: | 360-598 |
| Cow position: | chr12:42163227-42162993 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 97, 66 |
| Conread position: | 360-601 |
| Cow position: | chr12:42180939-42181186 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 12, 108 |
| Conread position: | 360-607 |
| Cow position: | chr12:11660114-11659865 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 167 |
| Conread position: | 360-616 |
| Cow position: | chr12:16605484-16605743 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 49, 85 |
| Conread position: | 360-662 |
| Cow position: | chr12:34473424-34473752 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 361-550 |
| Cow position: | chr12:26945662-26945841 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 361-554 |
| Cow position: | chr12:583320-583520 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 103 |
| Conread position: | 361-579 |
| Cow position: | chr12:23714855-23714640 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 361-597 |
| Cow position: | chr12:23106122-23105885 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 361-646 |
| Cow position: | chr12:18103431-18103722 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 361-648 |
| Cow position: | chr12:35240930-35241214 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 243, 41 |
| Conread position: | 361-662 |
| Cow position: | chr12:46714551-46714245 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 361-667 |
| Cow position: | chr12:7884496-7884814 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 103 |
| Conread position: | 361-678 |
| Cow position: | chr12:34165777-34165443 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 361-690 |
| Cow position: | chr12:35368828-35368485 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 100 |
| Conread position: | 362-524 |
| Cow position: | chr12:18418614-18418449 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 362-575 |
| Cow position: | chr12:20654298-20654509 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 56 |
| Conread position: | 362-652 |
| Cow position: | chr12:27802876-27803169 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 230, 33 |
| Conread position: | 362-662 |
| Cow position: | chr12:13988557-13988243 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 50, 102 |
| Conread position: | 363-580 |
| Cow position: | chr12:43551033-43551258 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 363-652 |
| Cow position: | chr12:18123849-18123563 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 363-662 |
| Cow position: | chr12:40910102-40910417 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 85 |
| Conread position: | 364-560 |
| Cow position: | chr12:30042911-30042709 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 364-566 |
| Cow position: | chr12:30476694-30476482 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 9, 103 |
| Conread position: | 365-648 |
| Cow position: | chr12:33851538-33851245 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 366-607 |
| Cow position: | chr12:24032667-24032433 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 366-612 |
| Cow position: | chr12:26749771-26750021 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 50, 85 |
| Conread position: | 366-638 |
| Cow position: | chr12:6187930-6188207 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 47, 109 |
| Conread position: | 366-662 |
| Cow position: | chr12:10942473-10942157 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 50, 101 |
| Conread position: | 366-662 |
| Cow position: | chr12:12301106-12300793 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 50, 101 |
| Conread position: | 366-662 |
| Cow position: | chr12:19258458-19258151 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 16, 97 |
| Conread position: | 367-606 |
| Cow position: | chr12:45001893-45002129 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 93 |
| Conread position: | 368-605 |
| Cow position: | chr12:24663289-24663053 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 368-606 |
| Cow position: | chr12:40157851-40158084 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 84 |
| Conread position: | 368-631 |
| Cow position: | chr12:40881745-40881996 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 368-662 |
| Cow position: | chr12:16670444-16670137 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 93 |
| Conread position: | 369-561 |
| Cow position: | chr12:25528386-25528577 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 369-611 |
| Cow position: | chr12:42286139-42285903 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 83, 20 |
| Conread position: | 369-612 |
| Cow position: | chr12:14223159-14222914 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 83 |
| Conread position: | 369-652 |
| Cow position: | chr12:25280325-25280621 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 369-690 |
| Cow position: | chr12:26868641-26868950 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 370-574 |
| Cow position: | chr12:28598446-28598232 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 370-607 |
| Cow position: | chr12:18523760-18523501 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 370-612 |
| Cow position: | chr12:15429421-15429664 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 370-612 |
| Cow position: | chr12:23446892-23446655 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 70 |
| Conread position: | 370-613 |
| Cow position: | chr12:31269333-31269085 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 106 |
| Conread position: | 370-661 |
| Cow position: | chr12:44622535-44622227 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 215 |
| Conread position: | 370-662 |
| Cow position: | chr12:7110383-7110072 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 371-660 |
| Cow position: | chr12:46333516-46333225 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 371-662 |
| Cow position: | chr12:35770850-35771147 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 371-662 |
| Cow position: | chr12:37169775-37170071 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 45, 67 |
| Conread position: | 371-662 |
| Cow position: | chr12:42698067-42698350 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 181 |
| Conread position: | 372-575 |
| Cow position: | chr12:24396992-24397194 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 89 |
| Conread position: | 372-612 |
| Cow position: | chr12:23836507-23836263 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 43, 91 |
| Conread position: | 372-690 |
| Cow position: | chr12:20479171-20479479 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 373-662 |
| Cow position: | chr12:34161575-34161288 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 219, 38 |
| Conread position: | 377-661 |
| Cow position: | chr12:30806021-30805727 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 378-561 |
| Cow position: | chr12:15832374-15832176 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 378-583 |
| Cow position: | chr12:3586281-3586079 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 378-604 |
| Cow position: | chr12:30210637-30210423 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 378-606 |
| Cow position: | chr12:42749610-42749378 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 85 |
| Conread position: | 378-607 |
| Cow position: | chr12:4594666-4594438 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 38, 126 |
| Conread position: | 378-613 |
| Cow position: | chr12:18518839-18518604 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 74 |
| Conread position: | 378-614 |
| Cow position: | chr12:30919600-30919355 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 378-640 |
| Cow position: | chr12:29966272-29966009 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 378-651 |
| Cow position: | chr12:33976370-33976084 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 378-655 |
| Cow position: | chr12:9229349-9229606 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 214, 38 |
| Conread position: | 378-662 |
| Cow position: | chr12:4596640-4596337 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 35, 206 |
| Conread position: | 378-662 |
| Cow position: | chr12:11587936-11587645 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 72 |
| Conread position: | 378-662 |
| Cow position: | chr12:34007466-34007179 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 77, 48 |
| Conread position: | 378-666 |
| Cow position: | chr12:9914948-9914658 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 79, 40 |
| Conread position: | 379-531 |
| Cow position: | chr12:44892375-44892220 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 379-607 |
| Cow position: | chr12:6241490-6241256 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 37, 88 |
| Conread position: | 379-614 |
| Cow position: | chr12:36993927-36994186 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 379-662 |
| Cow position: | chr12:3454863-3454563 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 379-690 |
| Cow position: | chr12:5714784-5714472 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 226, 39 |
| Conread position: | 380-595 |
| Cow position: | chr12:36261859-36261638 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 36, 87 |
| Conread position: | 380-607 |
| Cow position: | chr12:6688050-6687830 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 382-563 |
| Cow position: | chr12:26234001-26234182 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 74 |
| Conread position: | 382-575 |
| Cow position: | chr12:28651286-28651082 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 382-598 |
| Cow position: | chr12:22859613-22859414 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 382-607 |
| Cow position: | chr12:47267145-47267372 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 69 |
| Conread position: | 382-612 |
| Cow position: | chr12:4769082-4768858 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 382-612 |
| Cow position: | chr12:11057029-11056807 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 65 |
| Conread position: | 382-652 |
| Cow position: | chr12:35652703-35652977 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 382-659 |
| Cow position: | chr12:41159744-41159469 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 73 |
| Conread position: | 383-569 |
| Cow position: | chr12:22469685-22469486 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 383-575 |
| Cow position: | chr12:31841732-31841538 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 383-603 |
| Cow position: | chr12:1889418-1889636 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 383-661 |
| Cow position: | chr12:14131597-14131890 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 16, 169 |
| Conread position: | 383-662 |
| Cow position: | chr12:4341573-4341867 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 383-662 |
| Cow position: | chr12:24023649-24023923 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 208, 43 |
| Conread position: | 383-662 |
| Cow position: | chr12:38774083-38774367 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 384-546 |
| Cow position: | chr12:43644015-43644169 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 384-546 |
| Cow position: | chr12:43645346-43645500 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 384-563 |
| Cow position: | chr12:15509610-15509781 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 384-603 |
| Cow position: | chr12:2734750-2734966 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 85 |
| Conread position: | 384-604 |
| Cow position: | chr12:31883507-31883280 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 159 |
| Conread position: | 384-607 |
| Cow position: | chr12:17879144-17879364 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 28, 82 |
| Conread position: | 384-612 |
| Cow position: | chr12:18582838-18583059 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 384-612 |
| Cow position: | chr12:19261356-19261127 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 384-612 |
| Cow position: | chr12:29057551-29057321 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 384-612 |
| Cow position: | chr12:45167847-45168087 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 384-661 |
| Cow position: | chr12:22284961-22285246 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 384-662 |
| Cow position: | chr12:6410575-6410860 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 384-662 |
| Cow position: | chr12:27563218-27563505 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 384-678 |
| Cow position: | chr12:26217666-26217970 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 58 |
| Conread position: | 386-594 |
| Cow position: | chr12:26576051-26575846 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 54 |
| Conread position: | 387-547 |
| Cow position: | chr12:21819580-21819429 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 387-595 |
| Cow position: | chr12:42879857-42879644 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 77 |
| Conread position: | 387-662 |
| Cow position: | chr12:5635294-5635575 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 388-614 |
| Cow position: | chr12:32169703-32169471 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 43 |
| Conread position: | 389-573 |
| Cow position: | chr12:26357211-26357400 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 389-597 |
| Cow position: | chr12:43855046-43854842 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 389-599 |
| Cow position: | chr12:14986903-14986695 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 35, 71 |
| Conread position: | 389-690 |
| Cow position: | chr12:8943059-8943374 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 27, 216 |
| Conread position: | 390-586 |
| Cow position: | chr12:24437476-24437677 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 6, 24 |
| Conread position: | 390-595 |
| Cow position: | chr12:17269945-17269751 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 396-602 |
| Cow position: | chr12:31532260-31532458 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 406-586 |
| Cow position: | chr12:6226013-6226186 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 406-662 |
| Cow position: | chr12:18765834-18766106 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 411-562 |
| Cow position: | chr12:22341384-22341228 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 411-580 |
| Cow position: | chr12:25456546-25456372 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 412-570 |
| Cow position: | chr12:6480766-6480614 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 412-573 |
| Cow position: | chr12:20355347-20355186 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 46 |
| Conread position: | 412-574 |
| Cow position: | chr12:44861133-44861290 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 412-605 |
| Cow position: | chr12:3675390-3675588 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 412-609 |
| Cow position: | chr12:25814281-25814081 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 412-659 |
| Cow position: | chr12:38126397-38126651 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 198, 42 |
| Conread position: | 412-661 |
| Cow position: | chr12:33323370-33323622 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 412-662 |
| Cow position: | chr12:4866938-4866694 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 209, 28 |
| Conread position: | 412-662 |
| Cow position: | chr12:15163281-15163022 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 43, 159 |
| Conread position: | 412-662 |
| Cow position: | chr12:29675015-29675265 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 95, 43 |
| Conread position: | 412-662 |
| Cow position: | chr12:30661825-30662075 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 194, 31 |
| Conread position: | 412-662 |
| Cow position: | chr12:41474215-41473963 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 412-668 |
| Cow position: | chr12:21780288-21780029 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 197, 45 |
| Conread position: | 412-693 |
| Cow position: | chr12:3623815-3623535 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 197, 31 |
| Conread position: | 412-701 |
| Cow position: | chr12:12165778-12165495 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 42 |
| Conread position: | 413-575 |
| Cow position: | chr12:42143303-42143129 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 149 |
| Conread position: | 413-579 |
| Cow position: | chr12:27430642-27430471 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 413-613 |
| Cow position: | chr12:37256141-37255951 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 413-652 |
| Cow position: | chr12:24152465-24152220 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 91, 44 |
| Conread position: | 413-661 |
| Cow position: | chr12:4008157-4008404 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 72, 25 |
| Conread position: | 413-662 |
| Cow position: | chr12:15122448-15122194 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 145, 30 |
| Conread position: | 413-662 |
| Cow position: | chr12:31228706-31228446 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 44, 83 |
| Conread position: | 413-662 |
| Cow position: | chr12:37993599-37993851 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 7 |
| Conread position: | 413-690 |
| Cow position: | chr12:46120693-46120981 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 44, 258 |
| Conread position: | 414-613 |
| Cow position: | chr12:23574892-23574695 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 414-662 |
| Cow position: | chr12:42254791-42254539 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 184, 43 |
| Conread position: | 420-606 |
| Cow position: | chr12:7457425-7457605 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 421-662 |
| Cow position: | chr12:22485924-22485691 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 182, 34 |
| Conread position: | 424-612 |
| Cow position: | chr12:9514476-9514293 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 425-614 |
| Cow position: | chr12:5609398-5609577 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 430-678 |
| Cow position: | chr12:18572736-18572489 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 27, 5 |
| Conread position: | 434-583 |
| Cow position: | chr12:33319559-33319707 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 434-586 |
| Cow position: | chr12:27572129-27572282 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 434-603 |
| Cow position: | chr12:22894278-22894112 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 434-660 |
| Cow position: | chr12:41581221-41580992 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 434-661 |
| Cow position: | chr12:34148245-34148476 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 180 |
| Conread position: | 434-662 |
| Cow position: | chr12:25445024-25444798 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 434-662 |
| Cow position: | chr12:29995354-29995588 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 435-577 |
| Cow position: | chr12:25441747-25441609 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 435-607 |
| Cow position: | chr12:44901369-44901198 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 436-662 |
| Cow position: | chr12:42234168-42233930 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 55 |
| Conread position: | 438-607 |
| Cow position: | chr12:7978143-7977977 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 442-662 |
| Cow position: | chr12:30753818-30753595 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 162, 16 |
| Conread position: | 443-605 |
| Cow position: | chr12:45014781-45014618 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 443-652 |
| Cow position: | chr12:29779815-29780022 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 162, 26 |
| Conread position: | 443-652 |
| Cow position: | chr12:31959981-31959770 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 149 |
| Conread position: | 444-612 |
| Cow position: | chr12:6720428-6720257 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 444-662 |
| Cow position: | chr12:7000504-7000732 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 445-652 |
| Cow position: | chr12:29969681-29969463 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 188 |
| Conread position: | 447-595 |
| Cow position: | chr12:1767007-1766861 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 447-600 |
| Cow position: | chr12:7920338-7920186 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 448-663 |
| Cow position: | chr12:44595714-44595938 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 156, 218 |
| Conread position: | 451-662 |
| Cow position: | chr12:23798189-23797975 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 143, 6 |
| Conread position: | 454-586 |
| Cow position: | chr12:48578932-48578801 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 454-651 |
| Cow position: | chr12:30194791-30194591 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 114, 141 |
| Conread position: | 455-662 |
| Cow position: | chr12:15700169-15699946 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 75, 60 |
| Conread position: | 455-690 |
| Cow position: | chr12:17881950-17881706 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 151, 181 |
| Conread position: | 456-652 |
| Cow position: | chr12:18943570-18943775 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 457-691 |
| Cow position: | chr12:44517651-44517892 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 152, 223 |
| Conread position: | 458-591 |
| Cow position: | chr12:44542352-44542219 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 458-607 |
| Cow position: | chr12:4797385-4797237 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 458-607 |
| Cow position: | chr12:15260847-15260700 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 458-607 |
| Cow position: | chr12:45092532-45092383 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 458-608 |
| Cow position: | chr12:33948990-33948840 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 458-612 |
| Cow position: | chr12:27357471-27357320 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 458-612 |
| Cow position: | chr12:48415430-48415580 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 458-633 |
| Cow position: | chr12:34195624-34195800 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 148, 85 |
| Conread position: | 458-652 |
| Cow position: | chr12:27037364-27037568 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 135, 130 |
| Conread position: | 458-659 |
| Cow position: | chr12:28213593-28213393 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 148, 17 |
| Conread position: | 458-660 |
| Cow position: | chr12:7311466-7311270 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 66, 18 |
| Conread position: | 458-662 |
| Cow position: | chr12:3599674-3599880 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 458-662 |
| Cow position: | chr12:4720033-4719818 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 151, 180 |
| Conread position: | 458-662 |
| Cow position: | chr12:6210071-6210285 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 458-662 |
| Cow position: | chr12:22882145-22881925 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 458-662 |
| Cow position: | chr12:25321000-25320794 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 121, 95 |
| Conread position: | 458-678 |
| Cow position: | chr12:24116278-24116508 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 127, 19 |
| Conread position: | 459-583 |
| Cow position: | chr12:1701720-1701844 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 459-601 |
| Cow position: | chr12:12912852-12912994 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 459-607 |
| Cow position: | chr12:4793282-4793134 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 459-607 |
| Cow position: | chr12:6754281-6754133 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 459-679 |
| Cow position: | chr12:30605081-30605308 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 137, 60 |
| Conread position: | 459-690 |
| Cow position: | chr12:17774879-17774643 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 460-652 |
| Cow position: | chr12:11109838-11109649 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 122, 132 |
| Conread position: | 460-652 |
| Cow position: | chr12:15173907-15173708 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 145, 175 |
| Conread position: | 460-692 |
| Cow position: | chr12:31517088-31517335 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 132, 17 |
| Conread position: | 461-690 |
| Cow position: | chr12:25177515-25177739 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 193, 93 |
| Conread position: | 462-662 |
| Cow position: | chr12:5940426-5940220 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 464-662 |
| Cow position: | chr12:36790732-36790939 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 466-650 |
| Cow position: | chr12:4162277-4162482 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 466-662 |
| Cow position: | chr12:25188266-25188056 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 466-664 |
| Cow position: | chr12:30438314-30438113 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 126, 9 |
| Conread position: | 466-690 |
| Cow position: | chr12:28582432-28582660 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 143, 27 |
| Conread position: | 466-690 |
| Cow position: | chr12:47929278-47929061 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 469-659 |
| Cow position: | chr12:3197343-3197146 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 134, 72 |
| Conread position: | 469-662 |
| Cow position: | chr12:47804231-47804026 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 138, 50 |
| Conread position: | 469-678 |
| Cow position: | chr12:31429496-31429714 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 470-607 |
| Cow position: | chr12:4135151-4135014 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 477-613 |
| Cow position: | chr12:15641040-15641178 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 479-662 |
| Cow position: | chr12:17717127-17716950 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 126, 20 |
| Conread position: | 480-652 |
| Cow position: | chr12:44905691-44905526 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 480-662 |
| Cow position: | chr12:8868818-8869005 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 480-665 |
| Cow position: | chr12:18963864-18964057 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 481-614 |
| Cow position: | chr12:25110378-25110508 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 482-601 |
| Cow position: | chr12:43691354-43691473 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 483-654 |
| Cow position: | chr12:1333292-1333109 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 491-661 |
| Cow position: | chr12:25452394-25452574 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 502-663 |
| Cow position: | chr12:19664490-19664656 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 94, 121 |
| Conread position: | 505-644 |
| Cow position: | chr12:25530115-25529973 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 505-662 |
| Cow position: | chr12:5658038-5658197 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 522-662 |
| Cow position: | chr12:20326796-20326646 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 533-661 |
| Cow position: | chr12:29921774-29921910 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.