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Cow genome map

           
Conread name:
           
Ss1.1-rpgl18_p2.5
        

               
Conread position:
               
354-690
               

               
Cow position:
               
chr25:24573286-24572949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
355-607
               

               
Cow position:
               
chr25:24984201-24984437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
355-616
               

               
Cow position:
               
chr25:9025350-9025086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 104
               

               
Conread position:
               
355-691
               

               
Cow position:
               
chr25:33686459-33686806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
356-577
               

               
Cow position:
               
chr25:18491263-18491041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
357-607
               

               
Cow position:
               
chr25:6473862-6474114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
358-546
               

               
Cow position:
               
chr25:12609565-12609374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
358-563
               

               
Cow position:
               
chr25:5791488-5791700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 111
               

               
Conread position:
               
360-665
               

               
Cow position:
               
chr25:20785365-20785679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
361-487
               

               
Cow position:
               
chr25:7018258-7018135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
361-550
               

               
Cow position:
               
chr25:11373688-11373870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
361-575
               

               
Cow position:
               
chr25:7470590-7470367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
361-582
               

               
Cow position:
               
chr25:14944907-14945124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
361-602
               

               
Cow position:
               
chr25:432829-433070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
361-618
               

               
Cow position:
               
chr25:17919197-17918936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
361-662
               

               
Cow position:
               
chr25:18201709-18202017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
362-546
               

               
Cow position:
               
chr25:24202788-24202978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
362-586
               

               
Cow position:
               
chr25:20203126-20202907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
362-650
               

               
Cow position:
               
chr25:11957024-11956728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
362-652
               

               
Cow position:
               
chr25:12305497-12305195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 33
               

               
Conread position:
               
363-575
               

               
Cow position:
               
chr25:15573594-15573393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
363-575
               

               
Cow position:
               
chr25:36370041-36369824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
363-575
               

               
Cow position:
               
chr25:36375732-36375515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
363-593
               

               
Cow position:
               
chr25:30624851-30625096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
364-612
               

               
Cow position:
               
chr25:33457941-33457700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
364-652
               

               
Cow position:
               
chr25:7799769-7799472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
37, 102
               

               
Conread position:
               
364-659
               

               
Cow position:
               
chr25:11585745-11585428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
364-662
               

               
Cow position:
               
chr25:1838462-1838146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
366-661
               

               
Cow position:
               
chr25:24669236-24669527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
366-692
               

               
Cow position:
               
chr25:26224823-26225148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
239, 22
               

               
Conread position:
               
368-566
               

               
Cow position:
               
chr25:11169091-11168886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
368-595
               

               
Cow position:
               
chr25:28597391-28597627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
369-652
               

               
Cow position:
               
chr25:4245866-4245603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
240, 33
               

               
Conread position:
               
369-662
               

               
Cow position:
               
chr25:20069927-20069632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
369-663
               

               
Cow position:
               
chr25:34241889-34242190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
370-554
               

               
Cow position:
               
chr25:12223774-12223597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
370-606
               

               
Cow position:
               
chr25:15273875-15273647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
370-662
               

               
Cow position:
               
chr25:25716857-25716561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
370-690
               

               
Cow position:
               
chr25:16921583-16921910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
372-611
               

               
Cow position:
               
chr25:22298843-22298605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
373-552
               

               
Cow position:
               
chr25:15305888-15305706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
40, 85
               

               
Conread position:
               
373-574
               

               
Cow position:
               
chr25:11060343-11060138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
373-583
               

               
Cow position:
               
chr25:5637181-5637388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
375-613
               

               
Cow position:
               
chr25:1840527-1840292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
375-652
               

               
Cow position:
               
chr25:17474306-17474594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
377-540
               

               
Cow position:
               
chr25:23769693-23769847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
377-613
               

               
Cow position:
               
chr25:9616043-9615804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
378-551
               

               
Cow position:
               
chr25:36070850-36070680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
378-568
               

               
Cow position:
               
chr25:15695481-15695275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
378-571
               

               
Cow position:
               
chr25:27520542-27520749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
378-583
               

               
Cow position:
               
chr25:30852968-30852764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
378-593
               

               
Cow position:
               
chr25:36872852-36873069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
378-607
               

               
Cow position:
               
chr25:13503653-13503406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
378-607
               

               
Cow position:
               
chr25:33555810-33555580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
378-659
               

               
Cow position:
               
chr25:13295066-13294810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
378-661
               

               
Cow position:
               
chr25:33550714-33550417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
378-668
               

               
Cow position:
               
chr25:11316105-11315809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
378-690
               

               
Cow position:
               
chr25:26087722-26087401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
379-550
               

               
Cow position:
               
chr25:8596276-8596440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
379-662
               

               
Cow position:
               
chr25:7217018-7216739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
212, 13
               

               
Conread position:
               
382-563
               

               
Cow position:
               
chr25:13805226-13805030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
382-583
               

               
Cow position:
               
chr25:30278998-30279211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
382-605
               

               
Cow position:
               
chr25:10643117-10643334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
382-607
               

               
Cow position:
               
chr25:13768157-13767944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
202, 40
               

               
Conread position:
               
382-622
               

               
Cow position:
               
chr25:12195021-12195269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 130
               

               
Conread position:
               
382-662
               

               
Cow position:
               
chr25:13272768-13272475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
382-662
               

               
Cow position:
               
chr25:14791953-14791662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
382-662
               

               
Cow position:
               
chr25:36082067-36081785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
382-663
               

               
Cow position:
               
chr25:36555500-36555782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
216, 34
               

               
Conread position:
               
382-690
               

               
Cow position:
               
chr25:10504136-10504457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
383-609
               

               
Cow position:
               
chr25:23585041-23584823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
383-612
               

               
Cow position:
               
chr25:19679549-19679323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
383-615
               

               
Cow position:
               
chr25:35109080-35109303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
383-662
               

               
Cow position:
               
chr25:1823893-1824187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 102
               

               
Conread position:
               
383-662
               

               
Cow position:
               
chr25:30619267-30618972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 172
               

               
Conread position:
               
383-689
               

               
Cow position:
               
chr25:7306488-7306183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
384-569
               

               
Cow position:
               
chr25:24115118-24115305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
384-571
               

               
Cow position:
               
chr25:22565769-22565947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
384-606
               

               
Cow position:
               
chr25:9843378-9843150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
384-646
               

               
Cow position:
               
chr25:33256553-33256280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
59, 123
               

               
Conread position:
               
386-612
               

               
Cow position:
               
chr25:26306019-26306236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
387-605
               

               
Cow position:
               
chr25:26072369-26072582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
387-607
               

               
Cow position:
               
chr25:18288576-18288795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
387-613
               

               
Cow position:
               
chr25:9939063-9939289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
387-652
               

               
Cow position:
               
chr25:9269534-9269269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 31
               

               
Conread position:
               
387-662
               

               
Cow position:
               
chr25:7581228-7581516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
387-662
               

               
Cow position:
               
chr25:14513300-14513019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
182, 29
               

               
Conread position:
               
388-652
               

               
Cow position:
               
chr25:17658805-17658527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
388-661
               

               
Cow position:
               
chr25:26679420-26679137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
389-652
               

               
Cow position:
               
chr25:9989910-9990179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
397-662
               

               
Cow position:
               
chr25:13568999-13569262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
398-566
               

               
Cow position:
               
chr25:33776230-33776070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
399-615
               

               
Cow position:
               
chr25:7726834-7726626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
210, 11
               

               
Conread position:
               
411-652
               

               
Cow position:
               
chr25:12807204-12806963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
200, 46
               

               
Conread position:
               
412-552
               

               
Cow position:
               
chr25:7298733-7298875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
412-572
               

               
Cow position:
               
chr25:10138482-10138326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
412-575
               

               
Cow position:
               
chr25:31514344-31514186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
412-578
               

               
Cow position:
               
chr25:18551173-18551332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
412-604
               

               
Cow position:
               
chr25:6259044-6258859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 43
               

               
Conread position:
               
412-607
               

               
Cow position:
               
chr25:20461276-20461080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
412-612
               

               
Cow position:
               
chr25:11038523-11038322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
412-637
               

               
Cow position:
               
chr25:33311163-33311388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 43
               

               
Conread position:
               
412-652
               

               
Cow position:
               
chr25:27801439-27801206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
412-655
               

               
Cow position:
               
chr25:40904667-40904908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
107, 43
               

               
Conread position:
               
412-661
               

               
Cow position:
               
chr25:21893494-21893245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
192, 31
               

               
Conread position:
               
412-662
               

               
Cow position:
               
chr25:13443247-13443505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
412-662
               

               
Cow position:
               
chr25:20008294-20008043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
149, 43
               

               
Conread position:
               
413-569
               

               
Cow position:
               
chr25:7684740-7684887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
413-577
               

               
Cow position:
               
chr25:23323656-23323493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
413-586
               

               
Cow position:
               
chr25:8347812-8347646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
413-606
               

               
Cow position:
               
chr25:17403635-17403458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
413-607
               

               
Cow position:
               
chr25:9107371-9107551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
413-611
               

               
Cow position:
               
chr25:23244845-23245033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
413-612
               

               
Cow position:
               
chr25:6682891-6683094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
413-612
               

               
Cow position:
               
chr25:22348299-22348495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
413-613
               

               
Cow position:
               
chr25:7380678-7380872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
413-613
               

               
Cow position:
               
chr25:13223057-13222868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
413-613
               

               
Cow position:
               
chr25:19478849-19478642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
413-615
               

               
Cow position:
               
chr25:16867404-16867203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
413-662
               

               
Cow position:
               
chr25:21245438-21245695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
47, 65
               

               
Conread position:
               
413-667
               

               
Cow position:
               
chr25:7673465-7673194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
152, 44
               

               
Conread position:
               
413-690
               

               
Cow position:
               
chr25:19363901-19364180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
183, 30
               

               
Conread position:
               
413-690
               

               
Cow position:
               
chr25:36872522-36872242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
196, 45
               

               
Conread position:
               
420-586
               

               
Cow position:
               
chr25:23745421-23745253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
424-603
               

               
Cow position:
               
chr25:3744589-3744769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
429-612
               

               
Cow position:
               
chr25:18929041-18929224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
433-659
               

               
Cow position:
               
chr25:15254200-15254427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
24, 187
               

               
Conread position:
               
434-662
               

               
Cow position:
               
chr25:22750865-22751101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
176, 23
               

               
Conread position:
               
436-604
               

               
Cow position:
               
chr25:23505193-23505028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
442-645
               

               
Cow position:
               
chr25:36762244-36762031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
443-577
               

               
Cow position:
               
chr25:13735897-13736026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
443-607
               

               
Cow position:
               
chr25:4009233-4009066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
443-607
               

               
Cow position:
               
chr25:26161106-26160938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
443-612
               

               
Cow position:
               
chr25:22531419-22531251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 122
               

               
Conread position:
               
443-612
               

               
Cow position:
               
chr25:31762471-31762640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
443-662
               

               
Cow position:
               
chr25:12252669-12252904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
443-690
               

               
Cow position:
               
chr25:21894744-21895005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
444-608
               

               
Cow position:
               
chr25:40931408-40931249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
446-677
               

               
Cow position:
               
chr25:4547586-4547823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
138, 30
               

               
Conread position:
               
447-661
               

               
Cow position:
               
chr25:14196995-14196769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
450-586
               

               
Cow position:
               
chr25:34967379-34967515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
451-552
               

               
Cow position:
               
chr25:6781991-6781890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
454-612
               

               
Cow position:
               
chr25:22179042-22178886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
454-659
               

               
Cow position:
               
chr25:26701153-26700943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
456-612
               

               
Cow position:
               
chr25:23817719-23817872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
457-659
               

               
Cow position:
               
chr25:5920206-5919997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 207
               

               
Conread position:
               
457-661
               

               
Cow position:
               
chr25:30656526-30656731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
152, 89
               

               
Conread position:
               
458-577
               

               
Cow position:
               
chr25:23016142-23016023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
458-613
               

               
Cow position:
               
chr25:15463709-15463555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
458-652
               

               
Cow position:
               
chr25:1763209-1763009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
119, 167
               

               
Conread position:
               
458-652
               

               
Cow position:
               
chr25:26052025-26051820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
458-662
               

               
Cow position:
               
chr25:23779208-23779413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
112, 147
               

               
Conread position:
               
458-662
               

               
Cow position:
               
chr25:28187823-28188038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
150, 136
               

               
Conread position:
               
459-601
               

               
Cow position:
               
chr25:15218253-15218115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
459-642
               

               
Cow position:
               
chr25:17704865-17704679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
459-662
               

               
Cow position:
               
chr25:18906006-18905794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
459-690
               

               
Cow position:
               
chr25:12840597-12840842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
460-594
               

               
Cow position:
               
chr25:14157745-14157611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
460-606
               

               
Cow position:
               
chr25:36840517-36840370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
460-663
               

               
Cow position:
               
chr25:18564606-18564397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
144, 88
               

               
Conread position:
               
461-670
               

               
Cow position:
               
chr25:36120617-36120402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
461-690
               

               
Cow position:
               
chr25:15440663-15440899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
463-586
               

               
Cow position:
               
chr25:30064796-30064919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
463-650
               

               
Cow position:
               
chr25:22242080-22241896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
146, 77
               

               
Conread position:
               
466-586
               

               
Cow position:
               
chr25:23998810-23998930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
466-659
               

               
Cow position:
               
chr25:22730942-22730741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
466-661
               

               
Cow position:
               
chr25:61764-61570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
466-662
               

               
Cow position:
               
chr25:20133201-20133404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
139, 25
               

               
Conread position:
               
467-612
               

               
Cow position:
               
chr25:30817002-30816857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
467-652
               

               
Cow position:
               
chr25:38982206-38982022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
140, 77
               

               
Conread position:
               
469-615
               

               
Cow position:
               
chr25:4221492-4221639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
470-604
               

               
Cow position:
               
chr25:18541836-18541970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
476-613
               

               
Cow position:
               
chr25:8961874-8961739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
477-607
               

               
Cow position:
               
chr25:26089710-26089839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
477-691
               

               
Cow position:
               
chr25:14809376-14809155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
478-661
               

               
Cow position:
               
chr25:36036677-36036871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 152
               

               
Conread position:
               
478-662
               

               
Cow position:
               
chr25:9056280-9056103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
176, 48
               

               
Conread position:
               
481-606
               

               
Cow position:
               
chr25:10364238-10364360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
490-659
               

               
Cow position:
               
chr25:9349194-9349368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
511-607
               

               
Cow position:
               
chr25:18988459-18988363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
515-662
               

               
Cow position:
               
chr25:38425426-38425270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               
Show alignments to all cow chromosomes.