Cow genome map
| Conread name: | Ss1.1-rpigca0_001822.5 |
| Conread position: | 1-245 |
| Cow position: | chr10:8996802-8996557 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-269 |
| Cow position: | chr10:8996295-8996025 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 6-266 |
| Cow position: | chr10:8996461-8996197 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 7-250 |
| Cow position: | chr10:9010187-9009944 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-149 |
| Cow position: | chr10:9031468-9031608 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 77 |
| Conread position: | 9-245 |
| Cow position: | chr10:9010353-9010117 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-293 |
| Cow position: | chr10:9031385-9031668 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 81, 75 |
| Conread position: | 14-249 |
| Cow position: | chr10:8996536-8996301 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-250 |
| Cow position: | chr10:8996367-8996132 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-248 |
| Cow position: | chr10:8996869-8996638 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 21-213 |
| Cow position: | chr10:8996193-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-245 |
| Cow position: | chr10:9010509-9010285 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-248 |
| Cow position: | chr10:8996613-8996386 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 21-263 |
| Cow position: | chr10:9031312-9031554 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 22-250 |
| Cow position: | chr10:8996696-8996468 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-250 |
| Cow position: | chr10:21939096-21938868 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 160, 166 |
| Conread position: | 23-245 |
| Cow position: | chr10:9010591-9010369 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 148, 162 |
| Conread position: | 37-250 |
| Cow position: | chr10:9010409-9010196 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-249 |
| Cow position: | chr10:21939162-21938953 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 147, 135 |
Show alignments to all cow chromosomes.