Cow genome map


           Conread name:
           Ss1.1-rpigca0_001822.5
        

               Conread position:
               5-250
               

               Cow position:
               chr11:74554973-74554727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               9-250
               

               Cow position:
               chr11:74554716-74554475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               10-214
               

               Cow position:
               chr11:74554379-74554175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               177, 166
               

               Conread position:
               10-248
               

               Cow position:
               chr11:74555051-74554813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               82, 75
               

               Conread position:
               10-250
               

               Cow position:
               chr11:74554799-74554559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               84, 76
               

               Conread position:
               15-248
               

               Cow position:
               chr11:74554626-74554393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               81, 70
               

               Conread position:
               17-249
               

               Cow position:
               chr11:74554876-74554644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-250
               

               Cow position:
               chr11:74554535-74554307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               83, 64
               

               Conread position:
               30-248
               

               Cow position:
               chr11:74554443-74554225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               38-250
               

               Cow position:
               chr11:74555107-74554895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               58, 50
               
Show alignments to all cow chromosomes.