Cow genome map
| Conread name: | Ss1.1-rpigca0_001822.5 |
| Conread position: | 2-253 |
| Cow position: | chr13:56333676-56333928 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 9-245 |
| Cow position: | chr13:39984204-39984440 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 84, 77 |
| Conread position: | 10-250 |
| Cow position: | chr13:56292061-56291820 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 154, 164 |
| Conread position: | 15-245 |
| Cow position: | chr13:56292141-56291910 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 15-250 |
| Cow position: | chr13:56333606-56333841 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 89 |
| Conread position: | 16-245 |
| Cow position: | chr13:39984379-39984608 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 77, 70 |
| Conread position: | 17-245 |
| Cow position: | chr13:39984296-39984524 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 77, 53 |
| Conread position: | 17-245 |
| Cow position: | chr13:39984464-39984692 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 17-248 |
| Cow position: | chr13:39984128-39984359 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 76, 65 |
| Conread position: | 18-245 |
| Cow position: | chr13:39984549-39984776 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 69 |
| Conread position: | 18-246 |
| Cow position: | chr13:39984045-39984273 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 75, 68 |
| Conread position: | 25-248 |
| Cow position: | chr13:39984640-39984863 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 68, 60 |
| Conread position: | 27-248 |
| Cow position: | chr13:39983968-39984191 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 9, 57 |
| Conread position: | 39-248 |
| Cow position: | chr13:56334059-56334268 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.